Project: run3-v1.0.10.
This report is meant to help explore the results of the derfinder (Collado-Torres, Frazee, Jaffe, and Leek, 2014) package and was generated using regionReport (Collado-Torres, Jaffe, and Leek, 2014) package. While the report is rich, it is meant to just start the exploration of the results and exemplify some of the code used to do so. You will most likely need a more in-depth analysis for your specific data set.
Most plots were made with using ggplot2 (Wickham, 2009).
Theoretically, the p-values should be uniformly distributed between 0 and 1.
## Min. 1st Qu. Median Mean 3rd Qu. Max.
## 0.0000002 0.1731000 0.4514000 0.4689000 0.7665000 1.0000000
This is the numerical summary of the distribution of the p-values.
## Min. 1st Qu. Median Mean 3rd Qu. Max.
## 0.002418 0.691300 0.902700 0.800000 1.000000 1.000000
This is the numerical summary of the distribution of the q-values.
| Cut | Count |
|---|---|
| 0.0001 | 0 |
| 0.0010 | 0 |
| 0.0100 | 96 |
| 0.0250 | 162 |
| 0.0500 | 276 |
| 0.1000 | 507 |
| 0.2000 | 1062 |
| 0.3000 | 1451 |
| 0.4000 | 2202 |
| 0.5000 | 2541 |
| 0.6000 | 3408 |
| 0.7000 | 5342 |
| 0.8000 | 7509 |
| 0.9000 | 9973 |
| 1.0000 | 20145 |
This table shows the number of candidate Differentially Expressed Regions (DERs) with q-value less or equal than some commonly used cutoff values.
## Min. 1st Qu. Median Mean 3rd Qu. Max.
## 0.0100 1.0000 1.0000 0.9839 1.0000 1.0000
This is the numerical summary of the distribution of the q-values.
| Cut | Count |
|---|---|
| 0.0001 | 0 |
| 0.0010 | 0 |
| 0.0100 | 1 |
| 0.0250 | 1 |
| 0.0500 | 12 |
| 0.1000 | 25 |
| 0.2000 | 58 |
| 0.3000 | 90 |
| 0.4000 | 119 |
| 0.5000 | 236 |
| 0.6000 | 361 |
| 0.7000 | 470 |
| 0.8000 | 559 |
| 0.9000 | 753 |
| 1.0000 | 20145 |
This table shows the number of candidate Differentially Expressed Regions (DERs) with FWER adjusted p-values less or equal than some commonly used cutoff values.
This plot shows the density of the region lengths for all regions. The bottom panel is restricted to significant regions (q-value < 0.1)
This plot shows the density of the region areas for all regions. The bottom panel is restricted to significant regions (q-value < 0.1)
This plot shows the density of the null region lengths and areas. There were a total of 12329274 null regions.
This plot shows the density of the region mean coverage for all regions. The bottom panel is restricted to significant regions (q-value < 0.1)
The following plots are MA-style plots comparing each group vs the first one. The mean coverage is calculated using only two groups at a time and is weighted according to the number of samples on each group. Note that the mean coverage and fold change as calculated here do not taking into account the library sizes.
These plots are only shown when there are two or more groups. A total of 3 plot(s) were made.
The following plots were made using ggbio (Yin, Cook, and Lawrence, 2012) which in turn uses ggplot2 (Wickham, 2009). For more details check plotOverview in derfinder (Collado-Torres, Frazee, Jaffe, and Leek, 2014).
This plot shows the genomic locations of the candidate regions found in the analysis. The significant regions (q-value less than 0.1) are highlighted and the area of the regions is shown on top of each chromosome. Note that the area is in a relative scale.
This genomic overview plot shows the annotation region type for the candidate regions. Note that the regions are shown only if the annotation information is available. Below is a table of the actual number of results per annotation region type.
| Region | Count |
|---|---|
| upstream | 1387 |
| promoter | 341 |
| overlaps 5' | 17 |
| inside | 13483 |
| overlaps 3' | 11 |
| close to 3' | 22 |
| downstream | 2189 |
| covers | 0 |
| NA | 2695 |
This genomic overview plot shows the annotation region type for the candidate regions that have a q-value less than 0.1. Note that the regions are shown only if the annotation information is available.
Below are the plots for the top 100 candidate DERs as ranked by area. For each plot, annotation is shown if the candidate DER has a minimum overlap of 20 base pairs with annotation information (strand specific). If present, exons are collapsed and shown in blue. Introns are shown in light blue. The title of each plot is composed of the name of the nearest annotation element, the distance to it, and whether the region of the genome the DER falls into; all three pieces of information are based on bumphunter::annotateNearest().
The annotation depends on the Genomic State used. For details on which one was used for this report check the call to mergeResults in the reproducibility details.
Below is a table summarizing the number of genomic states per region.
| Number of Overlapping States | Frequency | State |
|---|---|---|
| 0 | 16206 | exon |
| 1 | 3899 | exon |
| 2 | 40 | exon |
| 0 | 17836 | intragenic |
| 1 | 2309 | intragenic |
| 0 | 18077 | intron |
| 1 | 2000 | intron |
| 2 | 66 | intron |
| 3 | 1 | intron |
| 4 | 1 | intron |
Below is an interactive table with the top 500 regions (out of 20145) as ranked by area. Inf and -Inf are shown as 1e100 and -1e100 respectively.
| areaRank | seqnames | start | end | width | strand | value | area | indexStart | indexEnd | cluster | clusterL | meanCoverage | mean0to186 | mean186to294 | mean294to322 | mean322to400 | log2FoldChange186to294vs0to186 | log2FoldChange294to322vs0to186 | log2FoldChange322to400vs0to186 | pvalues | significant | qvalues | significantQval | name | annotation | description | region | distance | subregion | insidedistance | exonnumber | nexons | UTR | annoStrand | geneL | codingL | fwer | significantFWER |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | chr1 | 26752733 | 26756208 | 3476 |
|
79.51398 | 276390.597 | 4578285 | 4581760 | 115 | 4415 | 4.8777762 | 0.0697929 | 0.1279056 | 0.2846951 | 19.0287112 | 8.739284e-01 | 2.028266e+00 | 8.090883e+00 | 0.0000002 | TRUE | 0.0024182 | TRUE | LIN28A | NM_024674 NP_078950 XM_006710899 XM_006710900 XP_006710962 XP_006710963 | inside exon | inside | 15464 | inside exon | 0 | 4 | 4 | overlaps 3'UTR |
|
18950 | 15566 | 0.01 | TRUE |
| 2 | chr8 | 41119492 | 41121402 | 1911 |
|
87.95128 | 168074.896 | 3330155 | 3332065 | 129 | 3517 | 2.6681057 | 0.1735217 | 0.0528519 | 0.0211408 | 10.4249084 | -1.715089e+00 | -3.037017e+00 | 5.908775e+00 | 0.0000006 | TRUE | 0.0024182 | TRUE | SFRP1 | NM_003012 NP_003003 | inside exon | inside | 45588 | inside exon | 0 | 3 | 3 | 3'UTR |
|
47514 | 43992 | 0.03 | TRUE |
| 3 | chr11 | 119288701 | 119290230 | 1530 |
|
77.58648 | 118707.318 | 12872515 | 12874044 | 381 | 5197 | 3.1359477 | 0.2879739 | 0.2121569 | 0.1452288 | 11.8984314 | -4.408065e-01 | -9.876107e-01 | 5.368690e+00 | 0.0000012 | TRUE | 0.0024182 | TRUE | THY1 | NM_006288 NP_006279 | inside exon | inside | 4016 | inside exon | 0 | 4 | 4 | overlaps 3'UTR |
|
5591 | 1497 | 0.04 | TRUE |
| 4 | chr5 | 146770385 | 146772376 | 1992 |
|
59.48379 | 118491.706 | 12805081 | 12807072 | 394 | 10875 | 1.9074046 | 0.3864458 | 0.2535141 | 0.1276104 | 6.8620482 | -6.082003e-01 | -1.598520e+00 | 4.150301e+00 | 0.0000012 | TRUE | 0.0024182 | TRUE | DPYSL3 | NM_001197294 NM_001387 NP_001184223 NP_001378 | inside exon | inside | 117243 | inside exon | 0 | 14 | 14 | 3'UTR |
|
119248 | 115823 | 0.04 | TRUE |
| 5 | chr6 | 121767978 | 121769318 | 1341 |
|
72.01807 | 96576.237 | 11635359 | 11636699 | 325 | 2859 | 2.8424683 | 0.4359433 | 0.5225951 | 0.2334079 | 10.1779269 | 2.615529e-01 | -9.012872e-01 | 4.545159e+00 | 0.0000015 | TRUE | 0.0024182 | TRUE | GJA1 | NM_000165 NP_000156 | inside exon | inside | 11233 | inside exon | 0 | 2 | 2 | overlaps 3'UTR |
|
14128 | 1148 | 0.05 | FALSE |
| 6 | chr3 | 181430237 | 181431387 | 1151 |
|
77.21343 | 88872.661 | 16396498 | 16397648 | 513 | 2487 | 2.5397046 | 0.1052997 | 0.0000000 | 0.2807993 | 9.7727194 | -1.000000e+100 | 1.415037e+00 | 6.536186e+00 | 0.0000019 | TRUE | 0.0024182 | TRUE | SOX2 | NM_003106 NP_003097 | inside exon | inside | 525 | inside exon | 0 | 1 | 1 | overlaps 3'UTR |
|
2511 | 953 | 0.05 | FALSE |
| 7 | chr1 | 156639292 | 156640300 | 1009 |
|
86.83235 | 87613.840 | 19868677 | 19869685 | 536 | 8487 | 1.4092170 | 0.3002973 | 0.0000000 | 0.0000000 | 5.3365709 | -1.000000e+100 | -1.000000e+100 | 4.151450e+00 | 0.0000019 | TRUE | 0.0024182 | TRUE | NES | NM_006617 NP_006608 | inside exon | inside | 6889 | inside exon | 0 | 4 | 4 | inside transcription region |
|
8633 | 7942 | 0.05 | FALSE |
| 8 | chr17 | 47131156 | 47132322 | 1167 |
|
73.50336 | 85778.421 | 9735800 | 9736966 | 231 | 18864 | 1.0700943 | 0.0000000 | 0.0000000 | 0.0000000 | 4.2803770 | NaN | NaN | 1.000000e+100 | 0.0000019 | TRUE | 0.0024182 | TRUE | IGF2BP1 | NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012 | inside exon | inside | 56382 | inside exon | 0 | 13 | 13 | 3'UTR |
|
58733 | 51698 | 0.05 | FALSE |
| 9 | chr3 | 46623010 | 46623949 | 940 |
|
91.12368 | 85656.263 | 5014344 | 5015283 | 116 | 4837 | 2.3481915 | 0.0000000 | 0.0000000 | 0.0000000 | 9.3927660 | NaN | NaN | 1.000000e+100 | 0.0000019 | TRUE | 0.0024182 | TRUE | TDGF1 | NM_001174136 NM_003212 NP_001167607 NP_003203 | inside exon | inside | 3934 | inside exon | 0 | 6 | 6 | 3'UTR |
|
4876 | 3280 | 0.05 | FALSE |
| 10 | chr4 | 88852568 | 88853551 | 984 |
|
84.47945 | 83127.783 | 6772611 | 6773594 | 233 | 15558 | 1.0010163 | 0.0000000 | 0.0000000 | 0.0000000 | 4.0040650 | NaN | NaN | 1.000000e+100 | 0.0000019 | TRUE | 0.0024182 | TRUE | SPP1 | NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 NP_000573 NP_001035147 NP_001035149 NP_001238758 NP_001238759 | upstream | upstream | 43251 | NA | NA | NA | 7 | NA |
|
7761 | 6000 | 0.05 | FALSE |
| 11 | chr13 | 51749186 | 51750194 | 1009 |
|
82.11605 | 82855.098 | 3598908 | 3599916 | 92 | 10662 | 3.4682854 | 0.0000000 | 0.0000000 | 0.0000000 | 13.8731417 | NaN | NaN | 1.000000e+100 | 0.0000020 | TRUE | 0.0024182 | TRUE | LINC00371 | NR_102431 NR_102432 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.05 | FALSE |
| 12 | chr14 | 74825669 | 74826706 | 1038 |
|
76.47094 | 79376.834 | 6617553 | 6618590 | 201 | 3221 | 1.0861753 | 0.0000000 | 0.0000000 | 0.0000000 | 4.3447013 | NaN | NaN | 1.000000e+100 | 0.0000020 | TRUE | 0.0024182 | TRUE | VRTN | NM_018228 NP_060698 | inside exon | inside | 10503 | inside exon | 0 | 2 | 2 | 3'UTR |
|
11545 | 2108 | 0.05 | FALSE |
| 13 | chr6 | 121769324 | 121770282 | 959 |
|
79.73529 | 76466.143 | 11636704 | 11637662 | 325 | 2859 | 4.2765902 | 0.4027112 | 0.2573514 | 0.7966632 | 15.6496350 | -6.460058e-01 | 9.842245e-01 | 5.280240e+00 | 0.0000024 | TRUE | 0.0024182 | TRUE | GJA1 | NM_000165 NP_000156 | inside exon | inside | 12579 | inside exon | 0 | 2 | 2 | 3'UTR |
|
14128 | 1148 | 0.06 | FALSE |
| 14 | chr2 | 241653373 | 241654359 | 987 |
|
77.21894 | 76215.091 | 23640292 | 23641278 | 634 | 13166 | 1.2658561 | 0.0435664 | 0.0000000 | 0.0000000 | 5.0198582 | -1.000000e+100 | -1.000000e+100 | 6.848288e+00 | 0.0000024 | TRUE | 0.0024182 | TRUE | KIF1A | NM_001244008 NM_004321 NP_001230937 NP_004312 XM_005247022 XM_005247023 XM_005247024 XM_005247026 XM_005247027 XM_005247028 XM_006712601 XM_006712602 XM_006712603 XM_006712604 XM_006712605 XP_005247079 XP_005247080 XP_005247081 XP_005247083 XP_005247084 XP_005247085 XP_006712664 XP_006712665 XP_006712666 XP_006712667 XP_006712668 | inside exon | inside | 105366 | inside exon | 0 | 49 | 49 | 3'UTR |
|
106544 | 80388 | 0.06 | FALSE |
| 15 | chrX | 91355122 | 91355987 | 866 |
|
85.19922 | 73782.524 | 5968604 | 5969469 | 243 | 5561 | 3.1404157 | 0.0808314 | 0.0004619 | 0.0198614 | 12.4605081 | -7.451211e+00 | -2.024946e+00 | 7.268231e+00 | 0.0000024 | TRUE | 0.0024182 | TRUE | PCDH11X | NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751 | inside intron | inside | 264662 | inside intron | 100387 | 3 | 7 | inside transcription region |
|
787768 | 632811 | 0.06 | FALSE |
| 16 | chr8 | 41121658 | 41122662 | 1005 |
|
72.05638 | 72416.664 | 3332321 | 3333325 | 129 | 3517 | 1.5849751 | 0.2612935 | 0.1681592 | 0.0000000 | 5.9104478 | -6.358437e-01 | -1.000000e+100 | 4.499524e+00 | 0.0000025 | TRUE | 0.0024182 | TRUE | SFRP1 | NM_003012 NP_003003 | inside exon | inside | 44328 | inside exon | 0 | 3 | 3 | 3'UTR |
|
47514 | 43992 | 0.06 | FALSE |
| 17 | chr4 | 154701763 | 154702907 | 1145 |
|
62.77889 | 71881.833 | 11398405 | 11399549 | 423 | 1145 | 5.5295197 | 0.3785153 | 0.5287336 | 0.5998253 | 20.6110044 | 4.821895e-01 | 6.641909e-01 | 5.766919e+00 | 0.0000025 | TRUE | 0.0024182 | TRUE | SFRP2 | NM_003013 NP_003004 | inside exon | inside | 7321 | inside exon | 0 | 3 | 3 | overlaps 3'UTR |
|
8486 | 7384 | 0.06 | FALSE |
| 18 | chr7 | 121701134 | 121702031 | 898 |
|
76.71994 | 68894.502 | 12251034 | 12251931 | 334 | 3203 | 1.4444321 | 0.0000000 | 0.0000000 | 0.0000000 | 5.7777283 | NaN | NaN | 1.000000e+100 | 0.0000025 | TRUE | 0.0024182 | TRUE | PTPRZ1 | NM_001206838 NM_001206839 NM_002851 NP_001193767 NP_001193768 NP_002842 XM_005250519 XM_006716076 XP_005250576 XP_006716139 | inside exon | inside | 187975 | inside exon | 0 | 30 | 30 | overlaps 3'UTR |
|
188931 | 187720 | 0.06 | FALSE |
| 19 | chr3 | 54666156 | 54666863 | 708 |
|
91.78333 | 64982.599 | 7090615 | 7091322 | 171 | 7351 | 2.8867232 | 0.0000000 | 0.0000000 | 0.0000000 | 11.5468927 | NaN | NaN | 1.000000e+100 | 0.0000027 | TRUE | 0.0024182 | TRUE | ESRG | NR_027122 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.06 | FALSE |
| 20 | chr17 | 47129292 | 47130155 | 864 |
|
73.29115 | 63323.553 | 9734055 | 9734918 | 231 | 18864 | 0.9523727 | 0.0467593 | 0.0000000 | 0.0000000 | 3.7627315 | -1.000000e+100 | -1.000000e+100 | 6.330385e+00 | 0.0000028 | TRUE | 0.0024182 | TRUE | IGF2BP1 | NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012 | inside exon | inside | 54518 | inside exon | 0 | 13 | 13 | 3'UTR |
|
58733 | 51698 | 0.06 | FALSE |
| 21 | chr4 | 180088184 | 180089122 | 939 |
|
66.96376 | 62878.974 | 12307600 | 12308538 | 468 | 3689 | 3.8029286 | 0.3011715 | 0.3669862 | 0.4517572 | 14.0917998 | 2.851406e-01 | 5.849625e-01 | 5.548127e+00 | 0.0000030 | TRUE | 0.0024182 | TRUE | LINC01098 | NM_001085490 NR_028342 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.06 | FALSE |
| 22 | chr13 | 100638293 | 100639019 | 727 |
|
84.29721 | 61284.073 | 5450930 | 5451656 | 193 | 5501 | 1.8143741 | 0.0000000 | 0.0000000 | 0.0555708 | 7.2019257 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0000030 | TRUE | 0.0024182 | TRUE | ZIC2 | NM_007129 NP_009060 | inside exon | inside | 4267 | inside exon | 0 | 3 | 3 | 3'UTR |
|
4993 | 3617 | 0.06 | FALSE |
| 23 | chr2 | 241655024 | 241655866 | 843 |
|
72.26168 | 60916.595 | 23641882 | 23642724 | 634 | 13166 | 1.2413998 | 0.0000000 | 0.0000000 | 0.0000000 | 4.9655991 | NaN | NaN | 1.000000e+100 | 0.0000030 | TRUE | 0.0024182 | TRUE | KIF1A | NM_001244008 NM_004321 NP_001230937 NP_004312 XM_005247022 XM_005247023 XM_005247024 XM_005247026 XM_005247027 XM_005247028 XM_006712601 XM_006712602 XM_006712603 XM_006712604 XM_006712605 XP_005247079 XP_005247080 XP_005247081 XP_005247083 XP_005247084 XP_005247085 XP_006712664 XP_006712665 XP_006712666 XP_006712667 XP_006712668 | inside exon | inside | 103859 | inside exon | 0 | 49 | 49 | 3'UTR |
|
106544 | 80388 | 0.06 | FALSE |
| 24 | chrX | 91359597 | 91360452 | 856 |
|
70.66158 | 60486.309 | 5972735 | 5973590 | 243 | 5561 | 1.2372664 | 0.0000000 | 0.0007009 | 0.0000000 | 4.9483645 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0000030 | TRUE | 0.0024182 | TRUE | PCDH11X | NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751 | inside intron | inside | 269137 | inside intron | 95922 | 3 | 7 | inside transcription region |
|
787768 | 632811 | 0.06 | FALSE |
| 25 | chr16 | 3065360 | 3066043 | 684 |
|
86.94394 | 59469.653 | 1016030 | 1016713 | 34 | 3462 | 4.2547515 | 0.1181287 | 0.1640351 | 0.0295322 | 16.7073099 | 4.736455e-01 | -2.000000e+00 | 7.143977e+00 | 0.0000030 | TRUE | 0.0024182 | TRUE | CLDN6 | NM_021195 NP_067018 | inside exon | inside | 2145 | inside exon | 0 | 2 | 2 | overlaps 5' UTR |
|
3475 | 662 | 0.06 | FALSE |
| 26 | chr17 | 47127878 | 47128536 | 659 |
|
81.24108 | 53537.874 | 9733135 | 9733793 | 231 | 18864 | 0.7050076 | 0.0000000 | 0.0000000 | 0.0000000 | 2.8200303 | NaN | NaN | 1.000000e+100 | 0.0000048 | TRUE | 0.0033120 | TRUE | IGF2BP1 | NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012 | inside exon | inside | 53104 | inside exon | 0 | 13 | 13 | 3'UTR |
|
58733 | 51698 | 0.11 | FALSE |
| 27 | chr16 | 3064714 | 3065348 | 635 |
|
82.75103 | 52546.906 | 1015384 | 1016018 | 34 | 3462 | 3.5320472 | 0.0000000 | 0.0000000 | 0.0000000 | 14.1281890 | NaN | NaN | 1.000000e+100 | 0.0000051 | TRUE | 0.0033120 | TRUE | CLDN6 | NM_021195 NP_067018 | inside exon | inside | 2840 | inside exon | 0 | 2 | 2 | 3'UTR |
|
3475 | 662 | 0.11 | FALSE |
| 28 | chr4 | 79637144 | 79637240 | 97 |
|
538.39311 | 52224.132 | 5869245 | 5869341 | 208 | 1740 | 0.4500000 | 0.0000000 | 0.0000000 | 0.0000000 | 1.8000000 | NaN | NaN | 1.000000e+100 | 0.0000051 | TRUE | 0.0033120 | TRUE | LINC01094 | NR_038303 NR_038304 NR_038305 NR_038306 NR_038307 NR_038308 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.11 | FALSE |
| 29 | chr1 | 223198626 | 223199262 | 637 |
|
79.44571 | 50606.916 | 26367323 | 26367959 | 754 | 8216 | 1.4865777 | 0.0000000 | 0.0681319 | 0.0028257 | 5.8753532 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0000056 | TRUE | 0.0033120 | TRUE | DISP1 | NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658 | downstream | downstream | 210195 | NA | NA | NA | 10 | NA |
|
190906 | 63148 | 0.12 | FALSE |
| 30 | chr1 | 223199880 | 223200539 | 660 |
|
76.59289 | 50551.310 | 26368088 | 26368747 | 754 | 8216 | 1.7748485 | 0.3657576 | 0.5766667 | 0.1530303 | 6.0039394 | 6.568499e-01 | -1.257070e+00 | 4.036950e+00 | 0.0000056 | TRUE | 0.0033120 | TRUE | DISP1 | NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658 | downstream | downstream | 211449 | NA | NA | NA | 10 | NA |
|
190906 | 63148 | 0.12 | FALSE |
| 31 | chr6 | 114745695 | 114746541 | 847 |
|
59.39083 | 50304.036 | 11097112 | 11097958 | 302 | 5708 | 2.1714286 | 0.2817001 | 0.5584416 | 0.3397875 | 7.5057851 | 9.872461e-01 | 2.704725e-01 | 4.735771e+00 | 0.0000056 | TRUE | 0.0033120 | TRUE | HS3ST5 | NM_153612 NP_705840 XM_006715379 XP_006715442 | upstream | upstream | 82155 | NA | NA | NA | 5 | NA |
|
286790 | 5588 | 0.12 | FALSE |
| 32 | chr6 | 114744941 | 114745647 | 707 |
|
70.27914 | 49687.350 | 11096383 | 11097089 | 302 | 5708 | 2.1809760 | 0.0571429 | 0.1142857 | 0.0000000 | 8.5524752 | 1.000000e+00 | -1.000000e+100 | 7.225625e+00 | 0.0000058 | TRUE | 0.0033120 | TRUE | HS3ST5 | NM_153612 NP_705840 XM_006715379 XP_006715442 | upstream | upstream | 81401 | NA | NA | NA | 5 | NA |
|
286790 | 5588 | 0.13 | FALSE |
| 33 | chrX | 91357652 | 91358393 | 742 |
|
66.78027 | 49550.959 | 5970991 | 5971732 | 243 | 5561 | 0.8698787 | 0.0000000 | 0.0000000 | 0.0215633 | 3.4579515 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0000058 | TRUE | 0.0033120 | TRUE | PCDH11X | NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751 | inside intron | inside | 267192 | inside intron | 97981 | 3 | 7 | inside transcription region |
|
787768 | 632811 | 0.13 | FALSE |
| 34 | chr6 | 121770288 | 121770836 | 549 |
|
89.76355 | 49280.187 | 11637668 | 11638216 | 325 | 2859 | 7.2091075 | 0.4346084 | 0.1428051 | 0.8382514 | 27.4207650 | -1.605668e+00 | 9.476669e-01 | 5.979409e+00 | 0.0000059 | TRUE | 0.0033120 | TRUE | GJA1 | NM_000165 NP_000156 | inside exon | inside | 13543 | inside exon | 0 | 2 | 2 | 3'UTR |
|
14128 | 1148 | 0.13 | FALSE |
| 35 | chr21 | 44473331 | 44474093 | 763 |
|
64.42285 | 49154.637 | 2429142 | 2429904 | 56 | 13860 | 4.4161861 | 0.5698558 | 0.7216252 | 0.4773263 | 15.8959371 | 3.406527e-01 | -2.556210e-01 | 4.801917e+00 | 0.0000061 | TRUE | 0.0033120 | TRUE | CBS | NM_000071 NM_001178008 NM_001178009 NP_000062 NP_001171479 NP_001171480 XM_006724057 XP_006724120 | overlaps two exons | inside | 22379 | overlaps two exons | 0 | 18 | 18 | overlaps 3'UTR |
|
23171 | 18313 | 0.13 | FALSE |
| 36 | chr3 | 32937639 | 32938161 | 523 |
|
93.94208 | 49131.707 | 3398644 | 3399166 | 82 | 7451 | 1.3167304 | 0.0772467 | 0.2260038 | 0.0772467 | 4.8864245 | 1.548803e+00 | 0.000000e+00 | 5.983163e+00 | 0.0000061 | TRUE | 0.0033120 | TRUE | TRIM71 | NM_001039111 NP_001034200 | downstream | downstream | 78129 | NA | NA | NA | 4 | NA |
|
74261 | 73730 | 0.13 | FALSE |
| 37 | chr4 | 154709486 | 154710211 | 726 |
|
67.27886 | 48844.451 | 11400187 | 11400912 | 424 | 3196 | 3.8529614 | 0.3614325 | 0.2953168 | 0.6955923 | 14.0595041 | -2.914628e-01 | 9.445157e-01 | 5.281676e+00 | 0.0000061 | TRUE | 0.0033120 | TRUE | SFRP2 | NM_003013 NP_003004 | inside exon | inside | 17 | inside exon | 0 | 1 | 3 | overlaps 5' UTR |
|
8486 | 7384 | 0.13 | FALSE |
| 38 | chr17 | 47132578 | 47133188 | 611 |
|
75.05311 | 45857.449 | 9737063 | 9737673 | 231 | 18864 | 1.3646481 | 0.0000000 | 0.0000000 | 0.0000000 | 5.4585925 | NaN | NaN | 1.000000e+100 | 0.0000074 | TRUE | 0.0038991 | TRUE | IGF2BP1 | NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012 | inside exon | inside | 57804 | inside exon | 0 | 13 | 13 | 3'UTR |
|
58733 | 51698 | 0.14 | FALSE |
| 39 | chr12 | 66358871 | 66359574 | 704 |
|
64.08708 | 45117.303 | 8151553 | 8152256 | 215 | 2964 | 1.3661222 | 0.1147727 | 0.2295455 | 0.1127841 | 5.0073864 | 1.000000e+00 | -2.521630e-02 | 5.447206e+00 | 0.0000077 | TRUE | 0.0038991 | TRUE | HMGA2 | NM_001015886 NM_003483 NM_003484 NP_003474 NP_003475 XM_005269164 XM_006719620 XP_005269221 XP_006719683 XR_245958 | inside exon | inside | 140631 | inside exon | 0 | 5 | 5 | 3'UTR |
|
141831 | 138021 | 0.14 | FALSE |
| 40 | chr13 | 43439807 | 43440537 | 731 |
|
60.07805 | 43917.055 | 2379953 | 2380683 | 57 | 13438 | 0.7550616 | 0.0484268 | 0.0276334 | 0.0259918 | 2.9181943 | -8.093941e-01 | -8.977499e-01 | 5.913126e+00 | 0.0000080 | TRUE | 0.0038991 | TRUE | EPSTI1 | NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959 | downstream | downstream | 125870 | NA | NA | NA | 13 | NA |
|
105883 | 103915 | 0.14 | FALSE |
| 41 | chr13 | 56152175 | 56152866 | 692 |
|
62.81466 | 43467.747 | 3924107 | 3924798 | 121 | 13379 | 0.9393064 | 0.0000000 | 0.0291908 | 0.0291908 | 3.6988439 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0000082 | TRUE | 0.0038991 | TRUE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.14 | FALSE |
| 42 | chr12 | 66357288 | 66358026 | 739 |
|
58.19693 | 43007.531 | 8150015 | 8150753 | 215 | 2964 | 1.1100812 | 0.2159675 | 0.1093369 | 0.0546685 | 4.0603518 | -9.820335e-01 | -1.982034e+00 | 4.232718e+00 | 0.0000082 | TRUE | 0.0038991 | TRUE | HMGA2 | NM_001015886 NM_003483 NM_003484 NP_003474 NP_003475 XM_005269164 XM_006719620 XP_005269221 XP_006719683 XR_245958 | inside exon | inside | 139048 | inside exon | 0 | 5 | 5 | 3'UTR |
|
141831 | 138021 | 0.14 | FALSE |
| 43 | chr2 | 77326330 | 77326911 | 582 |
|
72.88709 | 42420.286 | 8971477 | 8972058 | 213 | 11162 | 1.0189003 | 0.0000000 | 0.0000000 | 0.0000000 | 4.0756014 | NaN | NaN | 1.000000e+100 | 0.0000085 | TRUE | 0.0038991 | TRUE | LRRTM4 | NM_001134745 NM_001282924 NM_001282928 NM_024993 NP_001128217 NP_001269853 NP_001269857 NP_079269 | inside intron | inside | 422591 | inside intron | 350288 | 4 | 4 | inside transcription region |
|
774652 | 772976 | 0.14 | FALSE |
| 44 | chr17 | 47130651 | 47131149 | 499 |
|
84.31263 | 42072.000 | 9735301 | 9735799 | 231 | 18864 | 1.3081162 | 0.0404810 | 0.0000000 | 0.0000000 | 5.1919840 | -1.000000e+100 | -1.000000e+100 | 7.002898e+00 | 0.0000085 | TRUE | 0.0038991 | TRUE | IGF2BP1 | NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012 | inside exon | inside | 55877 | inside exon | 0 | 13 | 13 | 3'UTR |
|
58733 | 51698 | 0.14 | FALSE |
| 45 | chr5 | 141690136 | 141690841 | 706 |
|
56.93979 | 40199.495 | 12323735 | 12324440 | 384 | 14439 | 0.9403683 | 0.0858357 | 0.0000000 | 0.0000000 | 3.6756374 | -1.000000e+100 | -1.000000e+100 | 5.420273e+00 | 0.0000095 | TRUE | 0.0042482 | TRUE | SPRY4 | NM_001127496 NM_030964 NP_001120968 NP_112226 XM_005268518 XM_005268519 XM_006714798 XP_005268575 XP_005268576 XP_006714861 | inside exon | inside | 13779 | inside exon | 0 | 3 | 3 | 3'UTR |
|
14628 | 5556 | 0.15 | FALSE |
| 46 | chr3 | 54672858 | 54673506 | 649 |
|
61.42271 | 39863.336 | 7096453 | 7097101 | 171 | 7351 | 2.5134823 | 0.0126348 | 0.1531587 | 0.1839753 | 9.7041602 | 3.599550e+00 | 3.864035e+00 | 9.585054e+00 | 0.0000098 | TRUE | 0.0042979 | TRUE | ESRG | NR_027122 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.15 | FALSE |
| 47 | chr8 | 41166135 | 41166594 | 460 |
|
83.40009 | 38364.041 | 3333665 | 3334124 | 132 | 645 | 0.8604348 | 0.1756522 | 0.0000000 | 0.0000000 | 3.2660870 | -1.000000e+100 | -1.000000e+100 | 4.216770e+00 | 0.0000113 | TRUE | 0.0047505 | TRUE | SFRP1 | NM_003012 NP_003003 | inside exon | inside | 396 | inside exon | 0 | 1 | 3 | inside transcription region |
|
47514 | 43992 | 0.16 | FALSE |
| 48 | chr14 | 74824318 | 74824928 | 611 |
|
62.38688 | 38118.382 | 6616508 | 6617118 | 201 | 3221 | 0.8617840 | 0.0000000 | 0.0000000 | 0.0000000 | 3.4471358 | NaN | NaN | 1.000000e+100 | 0.0000114 | TRUE | 0.0047505 | TRUE | VRTN | NM_018228 NP_060698 | inside exon | inside | 9152 | inside exon | 0 | 2 | 2 | inside transcription region |
|
11545 | 2108 | 0.16 | FALSE |
| 49 | chr3 | 109048421 | 109049064 | 644 |
|
58.04171 | 37378.859 | 10144324 | 10144967 | 311 | 11345 | 1.1377329 | 0.1524845 | 0.1704969 | 0.1121118 | 4.1158385 | 1.610831e-01 | -4.437242e-01 | 4.754452e+00 | 0.0000118 | TRUE | 0.0047505 | TRUE | DPPA4 | NM_018189 NP_060659 | inside intron | inside | 7355 | inside intron | 493 | 5 | 6 | inside transcription region |
|
11431 | 8594 | 0.16 | FALSE |
| 50 | chr2 | 67566463 | 67567059 | 597 |
|
62.44863 | 37281.832 | 7345013 | 7345609 | 170 | 8050 | 0.8389447 | 0.0000000 | 0.0000000 | 0.0000000 | 3.3557789 | NaN | NaN | 1.000000e+100 | 0.0000121 | TRUE | 0.0047505 | TRUE | ETAA1 | NM_019002 NP_061875 XM_005264374 XM_005264375 XM_005264376 XM_005264377 XM_005264378 XP_005264431 XP_005264432 XP_005264433 XP_005264434 XP_005264435 | upstream | upstream | 57383 | NA | NA | NA | 6 | NA |
|
13091 | 12589 | 0.16 | FALSE |
| 51 | chr13 | 56148912 | 56149439 | 528 |
|
70.13353 | 37030.504 | 3921469 | 3921996 | 121 | 13379 | 1.1949811 | 0.0000000 | 0.0000000 | 0.0000000 | 4.7799242 | NaN | NaN | 1.000000e+100 | 0.0000122 | TRUE | 0.0047505 | TRUE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.16 | FALSE |
| 52 | chrX | 91356934 | 91357441 | 508 |
|
72.62517 | 36893.584 | 5970397 | 5970904 | 243 | 5561 | 0.9522638 | 0.0000000 | 0.0000000 | 0.0000000 | 3.8090551 | NaN | NaN | 1.000000e+100 | 0.0000124 | TRUE | 0.0047505 | TRUE | PCDH11X | NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751 | inside intron | inside | 266474 | inside intron | 98933 | 3 | 7 | inside transcription region |
|
787768 | 632811 | 0.16 | FALSE |
| 53 | chr13 | 51746403 | 51746853 | 451 |
|
81.62126 | 36811.190 | 3596182 | 3596632 | 92 | 10662 | 1.7410200 | 0.0110865 | 0.0895787 | 0.0000000 | 6.8634146 | 3.014355e+00 | -1.000000e+100 | 9.273982e+00 | 0.0000127 | TRUE | 0.0047505 | TRUE | LINC00371 | NR_102431 NR_102432 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.16 | FALSE |
| 54 | chr6 | 114743647 | 114744115 | 469 |
|
77.90835 | 36539.014 | 11095102 | 11095570 | 302 | 5708 | 6.9364606 | 0.2443497 | 1.1053305 | 0.3876333 | 26.0085288 | 2.177459e+00 | 6.657452e-01 | 6.733894e+00 | 0.0000127 | TRUE | 0.0047505 | TRUE | HS3ST5 | NM_153612 NP_705840 XM_006715379 XP_006715442 | upstream | upstream | 80107 | NA | NA | NA | 5 | NA |
|
286790 | 5588 | 0.16 | FALSE |
| 55 | chrX | 91358915 | 91359495 | 581 |
|
61.80140 | 35906.611 | 5972053 | 5972633 | 243 | 5561 | 1.0418244 | 0.0000000 | 0.0117040 | 0.0000000 | 4.1555938 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0000135 | TRUE | 0.0049612 | TRUE | PCDH11X | NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751 | inside intron | inside | 268455 | inside intron | 96879 | 3 | 7 | inside transcription region |
|
787768 | 632811 | 0.17 | FALSE |
| 56 | chr19 | 45411790 | 45412262 | 473 |
|
74.22039 | 35106.247 | 9396803 | 9397275 | 286 | 3581 | 3.5921776 | 0.4579281 | 0.3302326 | 0.4046512 | 13.1758985 | -4.716388e-01 | -1.784424e-01 | 4.846636e+00 | 0.0000148 | TRUE | 0.0053394 | TRUE | APOE | NM_000041 NP_000032 XM_005258867 XP_005258924 | inside exon | inside | 2751 | inside exon | 0 | 4 | 4 | inside transcription region |
|
3611 | 2625 | 0.19 | FALSE |
| 57 | chr4 | 41270004 | 41270441 | 438 |
|
78.55461 | 34406.920 | 3753829 | 3754266 | 117 | 11482 | 9.1081050 | 1.9310502 | 1.1945205 | 0.2452055 | 33.0616438 | -6.929540e-01 | -2.977323e+00 | 4.097701e+00 | 0.0000153 | TRUE | 0.0054177 | TRUE | UCHL1 | NM_004181 NP_004172 | inside exon | inside | 11106 | inside exon | 0 | 8 | 8 | overlaps 3'UTR |
|
11548 | 7357 | 0.19 | FALSE |
| 58 | chr3 | 181431436 | 181431922 | 487 |
|
68.44358 | 33332.023 | 16397679 | 16398165 | 513 | 2487 | 1.7767967 | 0.0000000 | 0.0000000 | 0.2106776 | 6.8965092 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0000165 | TRUE | 0.0054552 | TRUE | SOX2 | NM_003106 NP_003097 | inside exon | inside | 1724 | inside exon | 0 | 1 | 1 | 3'UTR |
|
2511 | 953 | 0.20 | FALSE |
| 59 | chr15 | 65619625 | 65620146 | 522 |
|
63.55412 | 33175.251 | 5963610 | 5964131 | 184 | 8664 | 0.6612069 | 0.0000000 | 0.0773946 | 0.0000000 | 2.5674330 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0000168 | TRUE | 0.0054552 | TRUE | IGDCC3 | NM_004884 NP_004875 | inside exon | inside | 50232 | inside exon | 0 | 14 | 14 | 3'UTR |
|
50913 | 48879 | 0.21 | FALSE |
| 60 | chr2 | 77325816 | 77326288 | 473 |
|
69.39551 | 32824.077 | 8970981 | 8971453 | 213 | 11162 | 0.8267442 | 0.0000000 | 0.0000000 | 0.0000000 | 3.3069767 | NaN | NaN | 1.000000e+100 | 0.0000168 | TRUE | 0.0054552 | TRUE | LRRTM4 | NM_001134745 NM_001282924 NM_001282928 NM_024993 NP_001128217 NP_001269853 NP_001269857 NP_079269 | inside intron | inside | 423214 | inside intron | 349774 | 4 | 4 | inside transcription region |
|
774652 | 772976 | 0.21 | FALSE |
| 61 | chr21 | 24734077 | 24734561 | 485 |
|
67.64219 | 32806.461 | 325119 | 325603 | 19 | 2439 | 0.6385567 | 0.0000000 | 0.0000000 | 0.0000000 | 2.5542268 | NaN | NaN | 1.000000e+100 | 0.0000168 | TRUE | 0.0054552 | TRUE | D21S2088E | NR_040254 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.21 | FALSE |
| 62 | chr13 | 100634699 | 100635393 | 695 |
|
47.18415 | 32792.984 | 5449544 | 5450238 | 193 | 5501 | 1.2333094 | 0.0581295 | 0.0000000 | 0.0000000 | 4.8751079 | -1.000000e+100 | -1.000000e+100 | 6.390020e+00 | 0.0000168 | TRUE | 0.0054552 | TRUE | ZIC2 | NM_007129 NP_009060 | inside exon | inside | 673 | inside exon | 0 | 1 | 3 | inside transcription region |
|
4993 | 3617 | 0.21 | FALSE |
| 63 | chr13 | 51744861 | 51745332 | 472 |
|
68.98421 | 32560.548 | 3594902 | 3595373 | 92 | 10662 | 0.5984110 | 0.0296610 | 0.0000000 | 0.0000000 | 2.3639831 | -1.000000e+100 | -1.000000e+100 | 6.316508e+00 | 0.0000176 | TRUE | 0.0055400 | TRUE | LINC00371 | NR_102431 NR_102432 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.21 | FALSE |
| 64 | chr6 | 132240713 | 132241139 | 427 |
|
75.96594 | 32437.456 | 12339917 | 12340343 | 349 | 3398 | 0.5853630 | 0.0000000 | 0.0000000 | 0.0000000 | 2.3414520 | NaN | NaN | 1.000000e+100 | 0.0000176 | TRUE | 0.0055400 | TRUE | ENPP1 | NM_006208 NP_006199 XM_005267017 XP_005267074 | downstream | downstream | 111557 | NA | NA | NA | 25 | NA |
|
87139 | 82475 | 0.21 | FALSE |
| 65 | chr4 | 180089245 | 180089661 | 417 |
|
75.93957 | 31666.803 | 12308539 | 12308955 | 468 | 3689 | 1.2370504 | 0.0000000 | 0.0000000 | 0.0000000 | 4.9482014 | NaN | NaN | 1.000000e+100 | 0.0000195 | TRUE | 0.0058388 | TRUE | LINC01098 | NM_001085490 NR_028342 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.22 | FALSE |
| 66 | chrX | 91356437 | 91356913 | 477 |
|
66.17958 | 31567.659 | 5969919 | 5970395 | 243 | 5561 | 1.4183438 | 0.0000000 | 0.0000000 | 0.0000000 | 5.6733753 | NaN | NaN | 1.000000e+100 | 0.0000197 | TRUE | 0.0058388 | TRUE | PCDH11X | NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751 | inside intron | inside | 265977 | inside intron | 99461 | 3 | 7 | inside transcription region |
|
787768 | 632811 | 0.22 | FALSE |
| 67 | chr6 | 114744120 | 114744644 | 525 |
|
59.73328 | 31359.973 | 11095575 | 11096099 | 302 | 5708 | 2.7027619 | 0.1154286 | 0.1859048 | 0.1539048 | 10.3558095 | 6.875634e-01 | 4.150375e-01 | 6.487296e+00 | 0.0000197 | TRUE | 0.0058388 | TRUE | HS3ST5 | NM_153612 NP_705840 XM_006715379 XP_006715442 | upstream | upstream | 80580 | NA | NA | NA | 5 | NA |
|
286790 | 5588 | 0.22 | FALSE |
| 68 | chr13 | 51747951 | 51748271 | 321 |
|
97.26020 | 31220.525 | 3597688 | 3598008 | 92 | 10662 | 2.9612150 | 0.0342679 | 0.0542056 | 0.0000000 | 11.7563863 | 6.615838e-01 | -1.000000e+100 | 8.422371e+00 | 0.0000197 | TRUE | 0.0058388 | TRUE | LINC00371 | NR_102431 NR_102432 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.22 | FALSE |
| 69 | chr6 | 31137993 | 31138419 | 427 |
|
72.61842 | 31008.067 | 3620462 | 3620888 | 81 | 1547 | 9.3961358 | 0.0730679 | 0.7199063 | 0.3353630 | 36.4562061 | 3.300499e+00 | 2.198414e+00 | 8.962711e+00 | 0.0000204 | TRUE | 0.0059437 | TRUE | POU5F1 | NM_001173531 NM_001285986 NM_001285987 NM_002701 NM_203289 NP_001167002 NP_001272915 NP_001272916 NP_002692 NP_976034 | inside exon | inside | 32 | inside exon | 0 | 1 | 5 | overlaps 5' UTR |
|
6337 | 6019 | 0.22 | FALSE |
| 70 | chr6 | 3224547 | 3225079 | 533 |
|
58.00959 | 30919.112 | 464184 | 464716 | 12 | 3330 | 7.9213884 | 2.6101313 | 1.8840525 | 1.2243902 | 25.9669794 | -4.702832e-01 | -1.092059e+00 | 3.314484e+00 | 0.0000208 | TRUE | 0.0059603 | TRUE | TUBB2B | NM_178012 NP_821080 | inside exon | inside | 2889 | inside exon | 0 | 4 | 4 | overlaps 3'UTR |
|
3473 | 2792 | 0.22 | FALSE |
| 71 | chr1 | 156642094 | 156642564 | 471 |
|
65.51656 | 30858.301 | 19871080 | 19871550 | 536 | 8487 | 0.7092357 | 0.0428875 | 0.0000000 | 0.0000000 | 2.7940552 | -1.000000e+100 | -1.000000e+100 | 6.025660e+00 | 0.0000210 | TRUE | 0.0059603 | TRUE | NES | NM_006617 NP_006608 | inside exon | inside | 4625 | inside exon | 0 | 4 | 4 | inside transcription region |
|
8633 | 7942 | 0.22 | FALSE |
| 72 | chr10 | 53793590 | 53794057 | 468 |
|
64.76130 | 30308.289 | 5589015 | 5589482 | 138 | 5761 | 2.4260684 | 0.0863248 | 0.0863248 | 0.0000000 | 9.5316239 | 0.000000e+00 | -1.000000e+100 | 6.786803e+00 | 0.0000221 | TRUE | 0.0061104 | TRUE | PRKG1 | NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029 | inside intron | inside | 959356 | inside intron | 20187 | 6 | 18 | inside transcription region |
|
1223876 | 1219309 | 0.23 | FALSE |
| 73 | chr3 | 46622622 | 46622994 | 373 |
|
81.24420 | 30304.086 | 5013971 | 5014343 | 116 | 4837 | 2.2241287 | 0.0000000 | 0.0000000 | 0.0000000 | 8.8965147 | NaN | NaN | 1.000000e+100 | 0.0000221 | TRUE | 0.0061104 | TRUE | TDGF1 | NM_001174136 NM_003212 NP_001167607 NP_003203 | inside exon | inside | 3546 | inside exon | 0 | 6 | 6 | overlaps 3'UTR |
|
4876 | 3280 | 0.23 | FALSE |
| 74 | chr4 | 93361855 | 93361950 | 96 |
|
313.08401 | 30056.065 | 7116442 | 7116537 | 250 | 6141 | 0.6572917 | 0.0000000 | 0.0000000 | 0.0000000 | 2.6291667 | NaN | NaN | 1.000000e+100 | 0.0000238 | TRUE | 0.0063471 | TRUE | GRID2 | NM_001286838 NM_001510 NP_001273767 NP_001501 XM_006714195 XP_006714258 | inside intron | inside | 136305 | inside intron | -135960 | 1 | 15 | inside transcription region |
|
1468099 | 1467841 | 0.23 | FALSE |
| 75 | chr13 | 51744366 | 51744682 | 317 |
|
94.75880 | 30038.539 | 3594552 | 3594868 | 92 | 10662 | 1.0873817 | 0.0000000 | 0.0000000 | 0.0000000 | 4.3495268 | NaN | NaN | 1.000000e+100 | 0.0000239 | TRUE | 0.0063471 | TRUE | LINC00371 | NR_102431 NR_102432 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.23 | FALSE |
| 76 | chr1 | 156638790 | 156639287 | 498 |
|
59.98427 | 29872.168 | 19868175 | 19868672 | 536 | 8487 | 1.4372490 | 0.6622490 | 0.2433735 | 0.0000000 | 4.8433735 | -1.444202e+00 | -1.000000e+100 | 2.870567e+00 | 0.0000246 | TRUE | 0.0063471 | TRUE | NES | NM_006617 NP_006608 | inside exon | inside | 7902 | inside exon | 0 | 4 | 4 | overlaps 3'UTR |
|
8633 | 7942 | 0.23 | FALSE |
| 77 | chr16 | 3140235 | 3140562 | 328 |
|
90.96302 | 29835.870 | 1054851 | 1055178 | 35 | 10352 | 0.8522866 | 0.0000000 | 0.0829268 | 0.0615854 | 3.2646341 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0000246 | TRUE | 0.0063471 | TRUE | ZSCAN10 | NM_001282415 NM_001282416 NM_032805 NP_001269344 NP_001269345 NP_116194 | inside exon | inside | 8731 | inside exon | 0 | 5 | 5 | overlaps 5' UTR |
|
10398 | 1160 | 0.23 | FALSE |
| 78 | chr13 | 53277405 | 53277933 | 529 |
|
56.30227 | 29783.903 | 3907679 | 3908207 | 103 | 529 | 1.4676749 | 0.0355388 | 0.0007561 | 0.0211720 | 5.8132325 | -5.554589e+00 | -7.472339e-01 | 7.353804e+00 | 0.0000246 | TRUE | 0.0063471 | TRUE | LECT1 | NM_001011705 NM_007015 NP_001011705 NP_008946 XM_006719760 XM_006719761 XP_006719823 XP_006719824 | inside exon | inside | 36014 | inside exon | 0 | 6 | 6 | overlaps 3'UTR |
|
36547 | 36187 | 0.23 | FALSE |
| 79 | chr20 | 38901726 | 38902118 | 393 |
|
75.09322 | 29511.636 | 4403076 | 4403468 | 116 | 5560 | 1.2376590 | 0.0000000 | 0.0513995 | 0.1027990 | 4.7964377 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0000252 | TRUE | 0.0064323 | TRUE | MAFB | NM_005461 NP_005452 | downstream | downstream | 415758 | NA | NA | NA | 1 | NA |
|
3359 | 971 | 0.23 | FALSE |
| 80 | chr2 | 1636024 | 1636547 | 524 |
|
55.88506 | 29283.774 | 68785 | 69308 | 2 | 3615 | 1.8604962 | 1.4286260 | 0.0770992 | 0.1541985 | 5.7820611 | -4.211768e+00 | -3.211768e+00 | 2.016956e+00 | 0.0000260 | TRUE | 0.0065561 | TRUE | PXDN | NM_012293 NP_036425 XM_005264707 XM_006711896 XP_005264764 XP_006711959 | inside exon | inside | 111744 | inside exon | 0 | 23 | 23 | 3'UTR |
|
112632 | 110251 | 0.24 | FALSE |
| 81 | chr3 | 32938593 | 32939100 | 508 |
|
57.19795 | 29056.558 | 3399513 | 3400020 | 82 | 7451 | 2.8214567 | 0.3248031 | 0.8153543 | 0.8303150 | 9.3153543 | 1.327862e+00 | 1.354093e+00 | 4.841973e+00 | 0.0000280 | TRUE | 0.0069593 | TRUE | TRIM71 | NM_001039111 NP_001034200 | downstream | downstream | 79083 | NA | NA | NA | 4 | NA |
|
74261 | 73730 | 0.25 | FALSE |
| 82 | chr6 | 114746581 | 114747109 | 529 |
|
54.60260 | 28884.773 | 11097998 | 11098526 | 302 | 5708 | 1.2026465 | 0.0000000 | 0.0015123 | 0.0056711 | 4.8034026 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0000288 | TRUE | 0.0070278 | TRUE | HS3ST5 | NM_153612 NP_705840 XM_006715379 XP_006715442 | upstream | upstream | 83041 | NA | NA | NA | 5 | NA |
|
286790 | 5588 | 0.26 | FALSE |
| 83 | chr4 | 88855096 | 88855451 | 356 |
|
81.03391 | 28848.073 | 6773873 | 6774228 | 233 | 15558 | 0.7375000 | 0.0000000 | 0.0000000 | 0.0000000 | 2.9500000 | NaN | NaN | 1.000000e+100 | 0.0000290 | TRUE | 0.0070278 | TRUE | SPP1 | NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 NP_000573 NP_001035147 NP_001035149 NP_001238758 NP_001238759 | upstream | upstream | 41351 | NA | NA | NA | 7 | NA |
|
7761 | 6000 | 0.26 | FALSE |
| 84 | chr2 | 67564680 | 67565017 | 338 |
|
84.98693 | 28725.581 | 7344267 | 7344604 | 170 | 8050 | 0.7118343 | 0.0000000 | 0.0000000 | 0.0000000 | 2.8473373 | NaN | NaN | 1.000000e+100 | 0.0000296 | TRUE | 0.0070866 | TRUE | ETAA1 | NM_019002 NP_061875 XM_005264374 XM_005264375 XM_005264376 XM_005264377 XM_005264378 XP_005264431 XP_005264432 XP_005264433 XP_005264434 XP_005264435 | upstream | upstream | 59425 | NA | NA | NA | 6 | NA |
|
13091 | 12589 | 0.26 | FALSE |
| 85 | chr15 | 29992934 | 29993100 | 167 |
|
171.40441 | 28624.536 | 678020 | 678186 | 27 | 5499 | 0.8221557 | 0.0023952 | 0.0000000 | 0.0000000 | 3.2862275 | -1.000000e+100 | -1.000000e+100 | 1.042206e+01 | 0.0000299 | TRUE | 0.0070866 | TRUE | TJP1 | NM_003257 NM_175610 NP_003248 NP_783297 XM_005254616 XM_005254617 XM_005254618 XM_005254619 XM_005254620 XM_005254621 XM_006720660 XM_006720661 XM_006725553 XM_006725554 XM_006725555 XM_006725556 XM_006725557 XM_006725558 XM_006725559 XM_006725560 XP_005254673 XP_005254674 XP_005254675 XP_005254676 XP_005254677 XP_005254678 XP_006720723 XP_006720724 XP_006725616 XP_006725617 XP_006725618 XP_006725619 XP_006725620 XP_006725621 XP_006725622 XP_006725623 | inside exon | inside | 121606 | inside exon | 0 | 27 | 27 | 3'UTR |
|
122349 | 120432 | 0.26 | FALSE |
| 86 | chr17 | 41605388 | 41605870 | 483 |
|
59.07014 | 28530.878 | 7969729 | 7970211 | 193 | 6721 | 1.3430642 | 0.3345756 | 0.2927536 | 0.0418219 | 4.7031056 | -1.926451e-01 | -3.000000e+00 | 3.813210e+00 | 0.0000303 | TRUE | 0.0070866 | TRUE | ETV4 | NM_001079675 NM_001261437 NM_001261438 NM_001261439 NM_001986 NP_001073143 NP_001248366 NP_001248367 NP_001248368 NP_001977 | inside exon | inside | 17930 | inside exon | 0 | 12 | 12 | 3'UTR |
|
18589 | 16791 | 0.26 | FALSE |
| 87 | chr4 | 180089763 | 180090165 | 403 |
|
68.29027 | 27520.979 | 12309057 | 12309459 | 468 | 3689 | 0.8524814 | 0.0000000 | 0.0000000 | 0.0000000 | 3.4099256 | NaN | NaN | 1.000000e+100 | 0.0000341 | TRUE | 0.0079067 | TRUE | LINC01098 | NM_001085490 NR_028342 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.29 | FALSE |
| 88 | chr3 | 181429729 | 181430064 | 336 |
|
80.48491 | 27042.929 | 16396162 | 16396497 | 513 | 2487 | 1.2839286 | 0.0000000 | 0.0726190 | 0.0000000 | 5.0630952 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0000359 | TRUE | 0.0080788 | TRUE | SOX2 | NM_003106 NP_003097 | inside exon | inside | 17 | inside exon | 0 | 1 | 1 | 5' UTR |
|
2511 | 953 | 0.30 | FALSE |
| 89 | chr3 | 54667420 | 54667767 | 348 |
|
77.62833 | 27014.657 | 7091866 | 7092213 | 171 | 7351 | 2.3274425 | 0.0000000 | 0.0000000 | 0.0000000 | 9.3097701 | NaN | NaN | 1.000000e+100 | 0.0000359 | TRUE | 0.0080788 | TRUE | ESRG | NR_027122 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.30 | FALSE |
| 90 | chr4 | 93174072 | 93174396 | 325 |
|
82.82230 | 26917.247 | 7112874 | 7113198 | 248 | 10998 | 0.8833846 | 0.0000000 | 0.0000000 | 0.0000000 | 3.5335385 | NaN | NaN | 1.000000e+100 | 0.0000361 | TRUE | 0.0080788 | TRUE | GRID2 | NM_001286838 NM_001510 NP_001273767 NP_001501 XM_006714195 XP_006714258 | upstream | upstream | 51154 | NA | NA | NA | 6 | NA |
|
912868 | 912269 | 0.30 | FALSE |
| 91 | chr13 | 43442075 | 43442357 | 283 |
|
93.63735 | 26499.371 | 2381629 | 2381911 | 57 | 13438 | 0.9687279 | 0.0275618 | 0.0374558 | 0.0049470 | 3.8049470 | 4.425182e-01 | -2.478047e+00 | 7.109061e+00 | 0.0000401 | TRUE | 0.0088267 | TRUE | EPSTI1 | NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959 | downstream | downstream | 124050 | NA | NA | NA | 13 | NA |
|
105883 | 103915 | 0.32 | FALSE |
| 92 | chr17 | 47126876 | 47127312 | 437 |
|
60.28434 | 26344.256 | 9732400 | 9732836 | 231 | 18864 | 1.0913043 | 0.0000000 | 0.0000000 | 0.0000000 | 4.3652174 | NaN | NaN | 1.000000e+100 | 0.0000403 | TRUE | 0.0088267 | TRUE | IGF2BP1 | NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012 | inside exon | inside | 52102 | inside exon | 0 | 13 | 13 | 3'UTR |
|
58733 | 51698 | 0.32 | FALSE |
| 93 | chr14 | 74823666 | 74824084 | 419 |
|
62.27434 | 26092.950 | 6616049 | 6616467 | 201 | 3221 | 1.0640811 | 0.0763723 | 0.0964200 | 0.0000000 | 4.0835322 | 3.362834e-01 | -1.000000e+100 | 5.740624e+00 | 0.0000413 | TRUE | 0.0089426 | TRUE | VRTN | NM_018228 NP_060698 | inside exon | inside | 8500 | inside exon | 0 | 2 | 2 | inside transcription region |
|
11545 | 2108 | 0.32 | FALSE |
| 94 | chr15 | 29992409 | 29992915 | 507 |
|
50.78236 | 25746.654 | 677513 | 678019 | 27 | 5499 | 0.8001972 | 0.3968442 | 0.0796844 | 0.0796844 | 2.6445759 | -2.316203e+00 | -2.316203e+00 | 2.736392e+00 | 0.0000440 | TRUE | 0.0094385 | TRUE | TJP1 | NM_003257 NM_175610 NP_003248 NP_783297 XM_005254616 XM_005254617 XM_005254618 XM_005254619 XM_005254620 XM_005254621 XM_006720660 XM_006720661 XM_006725553 XM_006725554 XM_006725555 XM_006725556 XM_006725557 XM_006725558 XM_006725559 XM_006725560 XP_005254673 XP_005254674 XP_005254675 XP_005254676 XP_005254677 XP_005254678 XP_006720723 XP_006720724 XP_006725616 XP_006725617 XP_006725618 XP_006725619 XP_006725620 XP_006725621 XP_006725622 XP_006725623 | inside exon | inside | 121791 | inside exon | 0 | 27 | 27 | 3'UTR |
|
122349 | 120432 | 0.34 | FALSE |
| 95 | chr1 | 160112673 | 160113131 | 459 |
|
55.77779 | 25602.008 | 20310687 | 20311145 | 554 | 3845 | 1.5294118 | 0.3856209 | 0.2688453 | 0.4692810 | 4.9938998 | -5.204070e-01 | 2.832689e-01 | 3.694912e+00 | 0.0000445 | TRUE | 0.0094423 | TRUE | ATP1A2 | NM_000702 NP_000693 | inside exon | inside | 15331 | inside exon | 0 | 16 | 16 | 3'UTR |
|
16032 | 13726 | 0.34 | FALSE |
| 96 | chr20 | 31396033 | 31396639 | 607 |
|
41.58531 | 25242.286 | 2810514 | 2811120 | 85 | 24597 | 6.7500000 | 2.1235585 | 2.9779242 | 1.7515651 | 20.1469522 | 4.878232e-01 | -2.778393e-01 | 3.246006e+00 | 0.0000476 | TRUE | 0.0099907 | TRUE | DNMT3B | NM_001207055 NM_001207056 NM_006892 NM_175848 NM_175849 NM_175850 NP_001193984 NP_001193985 NP_008823 NP_787044 NP_787045 NP_787046 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.35 | FALSE |
| 97 | chr13 | 43444949 | 43445318 | 370 |
|
66.88154 | 24746.169 | 2383962 | 2384331 | 57 | 13438 | 0.8098649 | 0.0545946 | 0.0870270 | 0.0545946 | 3.0432432 | 6.727054e-01 | 0.000000e+00 | 5.800708e+00 | 0.0000505 | TRUE | 0.0104472 | TRUE | EPSTI1 | NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959 | downstream | downstream | 121089 | NA | NA | NA | 13 | NA |
|
105883 | 103915 | 0.36 | FALSE |
| 98 | chrX | 91356076 | 91356404 | 329 |
|
74.68653 | 24571.869 | 5969558 | 5969886 | 243 | 5561 | 1.9784195 | 0.1227964 | 0.0680851 | 0.0832827 | 7.6395137 | -8.508566e-01 | -5.601794e-01 | 5.959141e+00 | 0.0000513 | TRUE | 0.0104472 | TRUE | PCDH11X | NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751 | inside intron | inside | 265616 | inside intron | 99970 | 3 | 7 | inside transcription region |
|
787768 | 632811 | 0.36 | FALSE |
| 99 | chrX | 113706508 | 113706943 | 436 |
|
56.35750 | 24571.869 | 6942976 | 6943411 | 299 | 5443 | 5.4100917 | 0.2316514 | 0.2362385 | 0.5027523 | 20.6697248 | 2.828900e-02 | 1.117892e+00 | 6.479420e+00 | 0.0000513 | TRUE | 0.0104472 | TRUE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | upstream | upstream | 111608 | NA | NA | NA | 6 | NA |
|
326073 | 180632 | 0.36 | FALSE |
| 100 | chr2 | 5834933 | 5835266 | 334 |
|
73.18044 | 24442.265 | 204353 | 204686 | 16 | 8660 | 0.5862275 | 0.0000000 | 0.0604790 | 0.0000000 | 2.2844311 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0000523 | TRUE | 0.0104668 | TRUE | SOX11 | NM_003108 NP_003099 | inside exon | inside | 2134 | inside exon | 0 | 1 | 1 | 3'UTR |
|
8718 | 1325 | 0.36 | FALSE |
| 101 | chr13 | 51745723 | 51746050 | 328 |
|
74.39013 | 24399.962 | 3595587 | 3595914 | 92 | 10662 | 0.9198171 | 0.0310976 | 0.0000000 | 0.0000000 | 3.6481707 | -1.000000e+100 | -1.000000e+100 | 6.874228e+00 | 0.0000525 | TRUE | 0.0104668 | TRUE | LINC00371 | NR_102431 NR_102432 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.36 | FALSE |
| 102 | chrX | 113706007 | 113706362 | 356 |
|
67.85693 | 24157.066 | 6942526 | 6942881 | 299 | 5443 | 1.8387640 | 0.2331461 | 0.1308989 | 0.1674157 | 6.8235955 | -8.327814e-01 | -4.777990e-01 | 4.871226e+00 | 0.0000547 | TRUE | 0.0108127 | TRUE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | upstream | upstream | 112189 | NA | NA | NA | 6 | NA |
|
326073 | 180632 | 0.36 | FALSE |
| 103 | chr17 | 47130236 | 47130587 | 352 |
|
67.16237 | 23641.155 | 9734949 | 9735300 | 231 | 18864 | 1.0309659 | 0.0000000 | 0.0000000 | 0.0000000 | 4.1238636 | NaN | NaN | 1.000000e+100 | 0.0000604 | TRUE | 0.0115930 | TRUE | IGF2BP1 | NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012 | inside exon | inside | 55462 | inside exon | 0 | 13 | 13 | 3'UTR |
|
58733 | 51698 | 0.37 | FALSE |
| 104 | chr13 | 56151776 | 56152168 | 393 |
|
60.13426 | 23632.764 | 3923714 | 3924106 | 121 | 13379 | 0.8391858 | 0.0000000 | 0.0000000 | 0.0000000 | 3.3567430 | NaN | NaN | 1.000000e+100 | 0.0000604 | TRUE | 0.0115930 | TRUE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.37 | FALSE |
| 105 | chr7 | 83093794 | 83094086 | 293 |
|
80.64764 | 23629.759 | 8282349 | 8282641 | 218 | 5588 | 0.9822526 | 0.0000000 | 0.0000000 | 0.0689420 | 3.8600683 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0000604 | TRUE | 0.0115930 | TRUE | SEMA3E | NM_001178129 NM_012431 NP_001171600 NP_036563 XM_006716187 XP_006716250 | inside intron | inside | 184393 | inside intron | -1712 | 4 | 17 | inside transcription region |
|
285257 | 280956 | 0.37 | FALSE |
| 106 | chr1 | 55530234 | 55530488 | 255 |
|
91.96561 | 23451.231 | 9839764 | 9840018 | 252 | 890 | 0.6260784 | 0.0000000 | 0.0000000 | 0.0000000 | 2.5043137 | NaN | NaN | 1.000000e+100 | 0.0000625 | TRUE | 0.0118844 | TRUE | PCSK9 | NM_174936 NP_777596 NR_110451 | NA | NA | 0 | NA | NA | NA | 10 | NA |
|
0 | 0 | 0.37 | FALSE |
| 107 | chr12 | 59715674 | 59715980 | 307 |
|
75.13775 | 23067.291 | 7618611 | 7618917 | 197 | 6694 | 0.5486971 | 0.0000000 | 0.0000000 | 0.0000000 | 2.1947883 | NaN | NaN | 1.000000e+100 | 0.0000677 | TRUE | 0.0126066 | TRUE | SLC16A7 | NM_001270622 NM_001270623 NM_004731 NP_001257551 NP_001257552 NP_004722 NR_073055 NR_073056 XM_005269231 XM_006719693 XP_005269288 XP_006719756 | upstream | upstream | 273841 | NA | NA | NA | 6 | NA |
|
193814 | 74877 | 0.37 | FALSE |
| 108 | chr3 | 54672043 | 54672431 | 389 |
|
59.19801 | 23028.026 | 7095638 | 7096026 | 171 | 7351 | 4.6195373 | 0.3984576 | 0.4904884 | 0.7794344 | 16.8097686 | 2.997930e-01 | 9.680015e-01 | 5.398730e+00 | 0.0000680 | TRUE | 0.0126066 | TRUE | ESRG | NR_027122 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.38 | FALSE |
| 109 | chr6 | 123104862 | 123105128 | 267 |
|
86.17874 | 23009.725 | 11688954 | 11689220 | 327 | 4353 | 0.8370787 | 0.0000000 | 0.0000000 | 0.0000000 | 3.3483146 | NaN | NaN | 1.000000e+100 | 0.0000682 | TRUE | 0.0126066 | TRUE | FABP7 | NM_001446 NP_001437 XM_005266858 XP_005266915 | inside exon | inside | 4216 | inside exon | 0 | 4 | 4 | overlaps 3'UTR |
|
4572 | 3972 | 0.38 | FALSE |
| 110 | chr12 | 53298442 | 53298830 | 389 |
|
58.61494 | 22801.214 | 6338229 | 6338617 | 154 | 7844 | 2.5528278 | 0.4000000 | 0.4077121 | 0.0591260 | 9.3444730 | 2.755070e-02 | -2.758136e+00 | 4.546041e+00 | 0.0000715 | TRUE | 0.0130566 | TRUE | KRT8 | NM_001256282 NM_001256293 NM_002273 NP_001243211 NP_001243222 NP_002264 NR_045962 | overlaps exon upstream | inside | 44820 | overlaps exon upstream | 0 | 2 | 9 | overlaps 5' UTR |
|
52679 | 7553 | 0.38 | FALSE |
| 111 | chr12 | 8947733 | 8948024 | 292 |
|
77.84411 | 22730.479 | 1367587 | 1367878 | 52 | 8328 | 1.6837329 | 0.1191781 | 0.1082192 | 0.0000000 | 6.5075342 | -1.391627e-01 | -1.000000e+100 | 5.770920e+00 | 0.0000719 | TRUE | 0.0130566 | TRUE | RIMKLB | NM_020734 NP_065785 XM_006719116 XM_006719117 XM_006719118 XM_006719119 XM_006719120 XM_006719121 XM_006719122 XM_006719123 XM_006719124 XM_006719125 XM_006719126 XM_006719127 XM_006719128 XP_006719179 XP_006719180 XP_006719181 XP_006719182 XP_006719183 XP_006719184 XP_006719185 XP_006719186 XP_006719187 XP_006719188 XP_006719189 XP_006719190 XP_006719191 | NA | NA | 0 | NA | NA | NA | 9 | NA |
|
0 | 0 | 0.38 | FALSE |
| 112 | chr12 | 77252526 | 77252808 | 283 |
|
79.53469 | 22508.318 | 9318545 | 9318827 | 243 | 7516 | 3.2035336 | 0.5893993 | 1.2565371 | 0.8084806 | 10.1597173 | 1.092136e+00 | 4.559678e-01 | 4.107471e+00 | 0.0000750 | TRUE | 0.0134944 | TRUE | CSRP2 | NM_001321 NP_001312 XM_005268678 XM_006719258 XM_006719259 XP_005268735 XP_006719321 XP_006719322 | inside exon | inside | 19991 | inside exon | 0 | 6 | 6 | overlaps 3'UTR |
|
20303 | 7308 | 0.38 | FALSE |
| 113 | chr2 | 1635679 | 1636004 | 326 |
|
67.80443 | 22104.245 | 68440 | 68765 | 2 | 3615 | 1.3033742 | 0.6865031 | 0.2453988 | 0.0000000 | 4.2815951 | -1.484138e+00 | -1.000000e+100 | 2.640810e+00 | 0.0000810 | TRUE | 0.0144329 | TRUE | PXDN | NM_012293 NP_036425 XM_005264707 XM_006711896 XP_005264764 XP_006711959 | inside exon | inside | 112287 | inside exon | 0 | 23 | 23 | 3'UTR |
|
112632 | 110251 | 0.38 | FALSE |
| 114 | chr2 | 241655946 | 241656215 | 270 |
|
81.67407 | 22052.000 | 23642804 | 23643073 | 634 | 13166 | 1.2807407 | 0.0000000 | 0.1437037 | 0.0000000 | 4.9792593 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0000817 | TRUE | 0.0144329 | TRUE | KIF1A | NM_001244008 NM_004321 NP_001230937 NP_004312 XM_005247022 XM_005247023 XM_005247024 XM_005247026 XM_005247027 XM_005247028 XM_006712601 XM_006712602 XM_006712603 XM_006712604 XM_006712605 XP_005247079 XP_005247080 XP_005247081 XP_005247083 XP_005247084 XP_005247085 XP_006712664 XP_006712665 XP_006712666 XP_006712667 XP_006712668 | inside exon | inside | 103510 | inside exon | 0 | 49 | 49 | 3'UTR |
|
106544 | 80388 | 0.38 | FALSE |
| 115 | chr12 | 8940289 | 8940565 | 277 |
|
78.65179 | 21786.546 | 1365993 | 1366269 | 52 | 8328 | 1.6061372 | 0.0851986 | 0.1776173 | 0.0000000 | 6.1617329 | 1.059872e+00 | -1.000000e+100 | 6.176363e+00 | 0.0000877 | TRUE | 0.0153588 | TRUE | RIMKLB | NM_020734 NP_065785 XM_006719116 XM_006719117 XM_006719118 XM_006719119 XM_006719120 XM_006719121 XM_006719122 XM_006719123 XM_006719124 XM_006719125 XM_006719126 XM_006719127 XM_006719128 XP_006719179 XP_006719180 XP_006719181 XP_006719182 XP_006719183 XP_006719184 XP_006719185 XP_006719186 XP_006719187 XP_006719188 XP_006719189 XP_006719190 XP_006719191 | NA | NA | 0 | NA | NA | NA | 9 | NA |
|
0 | 0 | 0.39 | FALSE |
| 116 | chr5 | 141691534 | 141691844 | 311 |
|
69.61142 | 21649.151 | 12324960 | 12325270 | 384 | 14439 | 0.7366559 | 0.0000000 | 0.0649518 | 0.0000000 | 2.8816720 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0000912 | TRUE | 0.0157991 | TRUE | SPRY4 | NM_001127496 NM_030964 NP_001120968 NP_112226 XM_005268518 XM_005268519 XM_006714798 XP_005268575 XP_005268576 XP_006714861 | inside exon | inside | 12776 | inside exon | 0 | 3 | 3 | 3'UTR |
|
14628 | 5556 | 0.40 | FALSE |
| 117 | chr3 | 57127164 | 57127581 | 418 |
|
51.75050 | 21631.708 | 7280702 | 7281119 | 180 | 8154 | 0.7416268 | 0.0688995 | 0.0000000 | 0.0966507 | 2.8009569 | -1.000000e+100 | 4.882865e-01 | 5.345282e+00 | 0.0000921 | TRUE | 0.0157991 | TRUE | IL17RD | NM_017563 NP_060033 XM_005265238 XM_006713209 XP_005265295 XP_006713272 | inside exon | inside | 76750 | inside exon | 0 | 14 | 14 | 3'UTR |
|
80321 | 13261 | 0.40 | FALSE |
| 118 | chr6 | 31132250 | 31132644 | 395 |
|
54.69255 | 21603.557 | 3618995 | 3619389 | 80 | 1705 | 16.0434177 | 1.9422785 | 3.5048101 | 1.3387342 | 57.3878481 | 8.515862e-01 | -5.368805e-01 | 4.884923e+00 | 0.0000925 | TRUE | 0.0157991 | TRUE | POU5F1 | NM_001173531 NM_001285986 NM_001285987 NM_002701 NM_203289 NP_001167002 NP_001272915 NP_001272916 NP_002692 NP_976034 | inside exon | inside | 5807 | inside exon | 0 | 5 | 5 | overlaps 3'UTR |
|
6337 | 6019 | 0.40 | FALSE |
| 119 | chr1 | 62676130 | 62676601 | 472 |
|
45.44083 | 21448.072 | 10232381 | 10232852 | 267 | 17384 | 6.9179025 | 1.8491525 | 3.6368644 | 2.1038136 | 20.0817797 | 9.758309e-01 | 1.861426e-01 | 3.440951e+00 | 0.0000963 | TRUE | 0.0162176 | TRUE | L1TD1 | NM_001164835 NM_019079 NP_001158307 NP_061952 | inside exon | inside | 15656 | inside exon | 0 | 5 | 5 | inside transcription region |
|
17527 | 4743 | 0.40 | FALSE |
| 120 | chr7 | 83093042 | 83093321 | 280 |
|
76.46170 | 21409.276 | 8281648 | 8281927 | 218 | 5588 | 1.6289286 | 0.0000000 | 0.0714286 | 0.0721429 | 6.3721429 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0000971 | TRUE | 0.0162176 | TRUE | SEMA3E | NM_001178129 NM_012431 NP_001171600 NP_036563 XM_006716187 XP_006716250 | inside intron | inside | 185158 | inside intron | -2477 | 4 | 17 | inside transcription region |
|
285257 | 280956 | 0.41 | FALSE |
| 121 | chr12 | 53293559 | 53293849 | 291 |
|
73.45115 | 21374.285 | 6337572 | 6337862 | 154 | 7844 | 3.8817869 | 1.1230241 | 0.7635739 | 0.2838488 | 13.3567010 | -5.565492e-01 | -1.984194e+00 | 3.572103e+00 | 0.0000974 | TRUE | 0.0162176 | TRUE | KRT8 | NM_001256282 NM_001256293 NM_002273 NP_001243211 NP_001243222 NP_002264 NR_045962 | inside exon | inside | 49801 | inside exon | 0 | 6 | 9 | inside transcription region |
|
52679 | 7553 | 0.41 | FALSE |
| 122 | chr11 | 67387645 | 67387979 | 335 |
|
63.64299 | 21320.402 | 7448990 | 7449324 | 229 | 2553 | 1.4961194 | 0.2411940 | 0.1808955 | 0.2238806 | 5.3385075 | -4.150375e-01 | -1.074647e-01 | 4.468170e+00 | 0.0000982 | TRUE | 0.0162186 | TRUE | DOC2GP | NR_033791 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.41 | FALSE |
| 123 | chr1 | 223197946 | 223198272 | 327 |
|
65.03143 | 21265.278 | 26366643 | 26366969 | 754 | 8216 | 5.6269113 | 0.0856269 | 0.0146789 | 0.1412844 | 22.2660550 | -2.544320e+00 | 7.224660e-01 | 8.022566e+00 | 0.0000995 | TRUE | 0.0162993 | TRUE | DISP1 | NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658 | downstream | downstream | 209515 | NA | NA | NA | 10 | NA |
|
190906 | 63148 | 0.41 | FALSE |
| 124 | chr4 | 88843313 | 88843553 | 241 |
|
87.33936 | 21048.785 | 6770443 | 6770683 | 233 | 15558 | 1.8672199 | 0.0000000 | 0.0000000 | 0.0000000 | 7.4688797 | NaN | NaN | 1.000000e+100 | 0.0001039 | TRUE | 0.0168489 | TRUE | SPP1 | NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 NP_000573 NP_001035147 NP_001035149 NP_001238758 NP_001238759 | upstream | upstream | 53249 | NA | NA | NA | 7 | NA |
|
7761 | 6000 | 0.41 | FALSE |
| 125 | chr3 | 54668373 | 54668634 | 262 |
|
80.18192 | 21007.663 | 7092494 | 7092755 | 171 | 7351 | 2.3643130 | 0.0000000 | 0.0000000 | 0.0000000 | 9.4572519 | NaN | NaN | 1.000000e+100 | 0.0001045 | TRUE | 0.0168489 | TRUE | ESRG | NR_027122 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.41 | FALSE |
| 126 | chr2 | 241654499 | 241654764 | 266 |
|
78.84984 | 20974.059 | 23641384 | 23641649 | 634 | 13166 | 0.8045113 | 0.0000000 | 0.0000000 | 0.0000000 | 3.2180451 | NaN | NaN | 1.000000e+100 | 0.0001057 | TRUE | 0.0168666 | TRUE | KIF1A | NM_001244008 NM_004321 NP_001230937 NP_004312 XM_005247022 XM_005247023 XM_005247024 XM_005247026 XM_005247027 XM_005247028 XM_006712601 XM_006712602 XM_006712603 XM_006712604 XM_006712605 XP_005247079 XP_005247080 XP_005247081 XP_005247083 XP_005247084 XP_005247085 XP_006712664 XP_006712665 XP_006712666 XP_006712667 XP_006712668 | inside exon | inside | 104961 | inside exon | 0 | 49 | 49 | 3'UTR |
|
106544 | 80388 | 0.41 | FALSE |
| 127 | chr16 | 3139519 | 3139795 | 277 |
|
75.61160 | 20944.412 | 1054385 | 1054661 | 35 | 10352 | 1.0440433 | 0.0440433 | 0.0729242 | 0.0000000 | 4.0592058 | 7.274741e-01 | -1.000000e+100 | 6.526130e+00 | 0.0001063 | TRUE | 0.0168666 | TRUE | ZSCAN10 | NM_001282415 NM_001282416 NM_032805 NP_001269344 NP_001269345 NP_116194 | inside exon | inside | 9498 | inside exon | 0 | 5 | 5 | inside transcription region |
|
10398 | 1160 | 0.41 | FALSE |
| 128 | chr3 | 57124044 | 57124288 | 245 |
|
85.09060 | 20847.197 | 7278420 | 7278664 | 180 | 8154 | 0.9628571 | 0.0000000 | 0.0914286 | 0.0000000 | 3.7600000 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0001083 | TRUE | 0.0170412 | TRUE | IL17RD | NM_017563 NP_060033 XM_005265238 XM_006713209 XP_005265295 XP_006713272 | inside exon | inside | 80043 | inside exon | 0 | 14 | 14 | 3'UTR |
|
80321 | 13261 | 0.41 | FALSE |
| 129 | chr2 | 5835386 | 5835692 | 307 |
|
66.34755 | 20368.698 | 204781 | 205087 | 16 | 8660 | 0.8980456 | 0.0000000 | 0.0000000 | 0.0664495 | 3.5257329 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0001195 | TRUE | 0.0186570 | TRUE | SOX11 | NM_003108 NP_003099 | inside exon | inside | 2587 | inside exon | 0 | 1 | 1 | 3'UTR |
|
8718 | 1325 | 0.41 | FALSE |
| 130 | chr1 | 223202201 | 223202478 | 278 |
|
72.56840 | 20174.014 | 26370172 | 26370449 | 754 | 8216 | 1.1839928 | 0.0000000 | 0.0000000 | 0.0366906 | 4.6992806 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0001243 | TRUE | 0.0191279 | TRUE | DISP1 | NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658 | downstream | downstream | 213770 | NA | NA | NA | 10 | NA |
|
190906 | 63148 | 0.42 | FALSE |
| 131 | chr15 | 79051563 | 79051766 | 204 |
|
98.77198 | 20149.485 | 8032465 | 8032668 | 235 | 8293 | 0.6906863 | 0.1735294 | 0.0000000 | 0.0000000 | 2.5892157 | -1.000000e+100 | -1.000000e+100 | 3.899263e+00 | 0.0001245 | TRUE | 0.0191279 | TRUE | ADAMTS7 | NM_014272 NP_055087 XM_005254137 XM_005254138 XP_005254194 XP_005254195 | inside exon | inside | 52007 | inside exon | 0 | 24 | 24 | overlaps 3'UTR |
|
52228 | 51799 | 0.42 | FALSE |
| 132 | chr10 | 53794667 | 53795040 | 374 |
|
53.79952 | 20121.021 | 5589878 | 5590251 | 138 | 5761 | 1.8275401 | 0.1080214 | 0.3748663 | 0.0540107 | 6.7732620 | 1.795059e+00 | -1.000000e+00 | 5.970462e+00 | 0.0001255 | TRUE | 0.0191279 | TRUE | PRKG1 | NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029 | inside intron | inside | 960433 | inside intron | 19204 | 6 | 18 | inside transcription region |
|
1223876 | 1219309 | 0.42 | FALSE |
| 133 | chr6 | 167650683 | 167650996 | 314 |
|
64.03361 | 20106.553 | 16098222 | 16098535 | 425 | 3952 | 0.7358280 | 0.0000000 | 0.0000000 | 0.0000000 | 2.9433121 | NaN | NaN | 1.000000e+100 | 0.0001263 | TRUE | 0.0191279 | TRUE | UNC93A | NM_001143947 NM_018974 NP_001137419 NP_061847 | upstream | upstream | 53807 | NA | NA | NA | 8 | NA |
|
24699 | 23962 | 0.42 | FALSE |
| 134 | chr4 | 180090833 | 180091150 | 318 |
|
62.83461 | 19981.405 | 12310104 | 12310421 | 468 | 3689 | 0.7690252 | 0.0000000 | 0.0000000 | 0.0000000 | 3.0761006 | NaN | NaN | 1.000000e+100 | 0.0001307 | TRUE | 0.0194981 | TRUE | LINC01098 | NM_001085490 NR_028342 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.42 | FALSE |
| 135 | chr13 | 100637856 | 100638092 | 237 |
|
84.30310 | 19979.834 | 5450530 | 5450766 | 193 | 5501 | 0.9229958 | 0.0000000 | 0.0000000 | 0.0000000 | 3.6919831 | NaN | NaN | 1.000000e+100 | 0.0001307 | TRUE | 0.0194981 | TRUE | ZIC2 | NM_007129 NP_009060 | inside exon | inside | 3830 | inside exon | 0 | 3 | 3 | overlaps 3'UTR |
|
4993 | 3617 | 0.42 | FALSE |
| 136 | chr11 | 67394001 | 67394284 | 284 |
|
69.64580 | 19779.408 | 7449788 | 7450071 | 230 | 770 | 2.6063380 | 0.4098592 | 1.3838028 | 0.6816901 | 7.9500000 | 1.755438e+00 | 7.339879e-01 | 4.277755e+00 | 0.0001367 | TRUE | 0.0202391 | TRUE | NUDT8 | NM_001243750 NM_181843 NP_001230679 NP_862826 | downstream | downstream | 3124 | NA | NA | NA | 3 | NA |
|
1999 | 1606 | 0.42 | FALSE |
| 137 | chr6 | 105530495 | 105530937 | 443 |
|
44.55293 | 19736.950 | 9857372 | 9857814 | 278 | 4151 | 0.6364560 | 0.0000000 | 0.0000000 | 0.0000000 | 2.5458239 | NaN | NaN | 1.000000e+100 | 0.0001376 | TRUE | 0.0202391 | TRUE | LIN28B | NM_001004317 NP_001004317 XM_006715477 XP_006715540 | inside exon | inside | 124521 | inside exon | 0 | 4 | 4 | 3'UTR |
|
125233 | 99901 | 0.42 | FALSE |
| 138 | chr15 | 40092127 | 40092325 | 199 |
|
98.51468 | 19604.422 | 1663185 | 1663383 | 59 | 2951 | 0.8150754 | 0.3155779 | 0.0522613 | 0.0874372 | 2.8050251 | -2.594181e+00 | -1.851677e+00 | 3.151946e+00 | 0.0001412 | TRUE | 0.0206134 | TRUE | GPR176 | NM_001271854 NM_001271855 NM_007223 NP_001258783 NP_001258784 NP_009154 XM_005254139 XM_006720379 XP_005254196 XP_006720442 | inside exon | inside | 120768 | inside exon | 0 | 4 | 4 | 3'UTR |
|
121870 | 118894 | 0.42 | FALSE |
| 139 | chr15 | 26792379 | 26792641 | 263 |
|
73.99604 | 19460.959 | 475455 | 475717 | 11 | 4122 | 0.5060837 | 0.0000000 | 0.0000000 | 0.0000000 | 2.0243346 | NaN | NaN | 1.000000e+100 | 0.0001466 | TRUE | 0.0212409 | TRUE | GABRB3 | NM_000814 NM_001191320 NM_001191321 NM_001278631 NM_021912 NP_000805 NP_001178249 NP_001178250 NP_001265560 NP_068712 NR_103801 | inside exon | inside | 392045 | inside exon | 0 | 10 | 10 | 3'UTR |
|
395992 | 391643 | 0.42 | FALSE |
| 140 | chr3 | 32937402 | 32937637 | 236 |
|
81.95429 | 19341.213 | 3398408 | 3398643 | 82 | 7451 | 1.3739407 | 0.4923729 | 0.1711864 | 0.0855932 | 4.7466102 | -1.524183e+00 | -2.524183e+00 | 3.269074e+00 | 0.0001509 | TRUE | 0.0217194 | TRUE | TRIM71 | NM_001039111 NP_001034200 | downstream | downstream | 77892 | NA | NA | NA | 4 | NA |
|
74261 | 73730 | 0.42 | FALSE |
| 141 | chrX | 91358468 | 91358787 | 320 |
|
60.28014 | 19289.645 | 5971733 | 5972052 | 243 | 5561 | 0.6662500 | 0.0000000 | 0.0000000 | 0.0000000 | 2.6650000 | NaN | NaN | 1.000000e+100 | 0.0001539 | TRUE | 0.0218043 | TRUE | PCDH11X | NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751 | inside intron | inside | 268008 | inside intron | 97587 | 3 | 7 | inside transcription region |
|
787768 | 632811 | 0.43 | FALSE |
| 142 | chr8 | 115258525 | 115258535 | 11 |
|
1752.20530 | 19274.258 | 8030168 | 8030178 | 291 | 2231 | 0.7863636 | 0.0363636 | 0.0545455 | 0.0000000 | 3.0545455 | 5.849625e-01 | -1.000000e+100 | 6.392317e+00 | 0.0001542 | TRUE | 0.0218043 | TRUE | CSMD3 | NM_052900 NM_198123 NM_198124 NP_443132 NP_937756 NP_937757 | upstream | upstream | 809283 | NA | NA | NA | 71 | NA |
|
1214083 | 1212083 | 0.43 | FALSE |
| 143 | chr15 | 55903997 | 55904250 | 254 |
|
75.71119 | 19230.642 | 4216911 | 4217164 | 141 | 5154 | 0.7375984 | 0.0000000 | 0.0000000 | 0.0000000 | 2.9503937 | NaN | NaN | 1.000000e+100 | 0.0001555 | TRUE | 0.0218043 | TRUE | PRTG | NM_173814 NP_776175 XM_005254310 XM_005254311 XM_006720473 XP_005254367 XP_005254368 XP_006720536 XR_429451 | inside exon | inside | 130927 | inside exon | 0 | 20 | 20 | 3'UTR |
|
131438 | 122919 | 0.43 | FALSE |
| 144 | chr12 | 66358333 | 66358673 | 341 |
|
56.31666 | 19203.980 | 8151023 | 8151363 | 215 | 2964 | 1.2438416 | 0.1571848 | 0.2862170 | 0.0000000 | 4.5319648 | 8.646481e-01 | -1.000000e+100 | 4.849603e+00 | 0.0001565 | TRUE | 0.0218043 | TRUE | HMGA2 | NM_001015886 NM_003483 NM_003484 NP_003474 NP_003475 XM_005269164 XM_006719620 XP_005269221 XP_006719683 XR_245958 | inside exon | inside | 140093 | inside exon | 0 | 5 | 5 | 3'UTR |
|
141831 | 138021 | 0.43 | FALSE |
| 145 | chr15 | 55905004 | 55905415 | 412 |
|
46.55812 | 19181.945 | 4217662 | 4218073 | 141 | 5154 | 0.5822816 | 0.0000000 | 0.0000000 | 0.0000000 | 2.3291262 | NaN | NaN | 1.000000e+100 | 0.0001569 | TRUE | 0.0218043 | TRUE | PRTG | NM_173814 NP_776175 XM_005254310 XM_005254311 XM_006720473 XP_005254367 XP_005254368 XP_006720536 XR_429451 | inside exon | inside | 129762 | inside exon | 0 | 20 | 20 | 3'UTR |
|
131438 | 122919 | 0.43 | FALSE |
| 146 | chr4 | 187163189 | 187163451 | 263 |
|
72.70776 | 19122.140 | 12655597 | 12655859 | 493 | 5193 | 1.1982890 | 0.1178707 | 0.2212928 | 0.0646388 | 4.3893536 | 9.087509e-01 | -8.667335e-01 | 5.218731e+00 | 0.0001586 | TRUE | 0.0218788 | TRUE | KLKB1 | NM_000892 NP_000883 XM_005262987 XM_006714213 XP_005263044 XP_006714276 | inside intron | inside | 14517 | inside intron | -3670 | 7 | 15 | inside transcription region |
|
30953 | 25911 | 0.43 | FALSE |
| 147 | chr3 | 32936380 | 32936810 | 431 |
|
44.09218 | 19003.729 | 3397461 | 3397891 | 82 | 7451 | 1.0386311 | 0.2904872 | 0.2116009 | 0.0000000 | 3.6524362 | -4.571288e-01 | -1.000000e+100 | 3.652312e+00 | 0.0001636 | TRUE | 0.0223339 | TRUE | TRIM71 | NM_001039111 NP_001034200 | downstream | downstream | 76870 | NA | NA | NA | 4 | NA |
|
74261 | 73730 | 0.43 | FALSE |
| 148 | chr14 | 93397710 | 93398047 | 338 |
|
56.17366 | 18986.697 | 8679091 | 8679428 | 253 | 12111 | 1.2159763 | 0.0000000 | 0.0000000 | 0.1112426 | 4.7526627 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0001641 | TRUE | 0.0223339 | TRUE | CHGA | NM_001275 NP_001266 XM_005267292 XM_006725160 XP_005267349 XP_006725223 | inside intron | inside | 8265 | inside intron | 668 | 6 | 7 | inside transcription region |
|
12193 | 11524 | 0.43 | FALSE |
| 149 | chr1 | 17301039 | 17301322 | 284 |
|
66.37672 | 18850.988 | 2835158 | 2835441 | 74 | 6061 | 1.9545775 | 0.1422535 | 0.1985915 | 0.0119718 | 7.4654930 | 4.813399e-01 | -3.570749e+00 | 5.713701e+00 | 0.0001686 | TRUE | 0.0226563 | TRUE | MFAP2 | NM_001135247 NM_001135248 NM_002403 NM_017459 NP_001128719 NP_001128720 NP_002394 NP_059453 | inside exon | inside | 6759 | inside exon | 0 | 9 | 9 | 3'UTR |
|
7082 | 3353 | 0.43 | FALSE |
| 150 | chr3 | 54667104 | 54667361 | 258 |
|
72.91943 | 18813.212 | 7091550 | 7091807 | 171 | 7351 | 0.8728682 | 0.0000000 | 0.0000000 | 0.0000000 | 3.4914729 | NaN | NaN | 1.000000e+100 | 0.0001698 | TRUE | 0.0226563 | TRUE | ESRG | NR_027122 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.43 | FALSE |
| 151 | chr15 | 55907499 | 55907772 | 274 |
|
68.53608 | 18778.886 | 4219326 | 4219599 | 141 | 5154 | 0.5806569 | 0.0000000 | 0.0000000 | 0.0000000 | 2.3226277 | NaN | NaN | 1.000000e+100 | 0.0001715 | TRUE | 0.0226563 | TRUE | PRTG | NM_173814 NP_776175 XM_005254310 XM_005254311 XM_006720473 XP_005254367 XP_005254368 XP_006720536 XR_429451 | inside exon | inside | 127405 | inside exon | 0 | 20 | 20 | 3'UTR |
|
131438 | 122919 | 0.44 | FALSE |
| 152 | chr1 | 63786600 | 63786861 | 262 |
|
71.63101 | 18767.325 | 10288923 | 10289184 | 272 | 2673 | 1.0572519 | 0.0000000 | 0.0000000 | 0.0000000 | 4.2290076 | NaN | NaN | 1.000000e+100 | 0.0001720 | TRUE | 0.0226563 | TRUE | FOXD3 | NM_012183 NP_036315 | promoter | promoter | 1869 | NA | NA | NA | 1 | NA |
|
2067 | 1436 | 0.44 | FALSE |
| 153 | chr19 | 17713281 | 17713584 | 304 |
|
61.63162 | 18736.011 | 4871723 | 4872026 | 149 | 4082 | 0.8564145 | 0.0664474 | 0.0000000 | 0.0000000 | 3.3592105 | -1.000000e+100 | -1.000000e+100 | 5.659766e+00 | 0.0001741 | TRUE | 0.0226563 | TRUE | UNC13A | NM_001080421 NP_001073890 XM_006722692 XP_006722755 | inside exon | inside | 85466 | inside exon | 0 | 44 | 44 | 3'UTR |
|
86913 | 82145 | 0.44 | FALSE |
| 154 | chr3 | 54669413 | 54669639 | 227 |
|
82.46499 | 18719.552 | 7093485 | 7093711 | 171 | 7351 | 0.7030837 | 0.0000000 | 0.0000000 | 0.0000000 | 2.8123348 | NaN | NaN | 1.000000e+100 | 0.0001746 | TRUE | 0.0226563 | TRUE | ESRG | NR_027122 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.44 | FALSE |
| 155 | chr22 | 31531180 | 31531524 | 345 |
|
54.25398 | 18717.623 | 2714029 | 2714373 | 72 | 5042 | 0.6847826 | 0.0000000 | 0.0000000 | 0.0000000 | 2.7391304 | NaN | NaN | 1.000000e+100 | 0.0001748 | TRUE | 0.0226563 | TRUE | PLA2G3 | NM_015715 NP_056530 | inside exon | inside | 4945 | inside exon | 0 | 7 | 7 | 3'UTR |
|
5676 | 4631 | 0.44 | FALSE |
| 156 | chr9 | 133996715 | 133997019 | 305 |
|
61.31252 | 18700.319 | 11060029 | 11060333 | 391 | 5341 | 0.9900000 | 0.0111475 | 0.0616393 | 0.2780328 | 3.6091803 | 2.467126e+00 | 4.640458e+00 | 8.338802e+00 | 0.0001759 | TRUE | 0.0226563 | TRUE | AIF1L | NM_001002260 NM_001185095 NM_001185096 NM_031426 NP_001172024 NP_001172025 NP_113614 NR_033701 | inside exon | inside | 18525 | inside exon | 0 | 5 | 5 | 3'UTR |
|
20349 | 17441 | 0.44 | FALSE |
| 157 | chr3 | 57125494 | 57125759 | 266 |
|
70.25792 | 18688.608 | 7279635 | 7279900 | 180 | 8154 | 0.6473684 | 0.0000000 | 0.1248120 | 0.0000000 | 2.4646617 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0001766 | TRUE | 0.0226563 | TRUE | IL17RD | NM_017563 NP_060033 XM_005265238 XM_006713209 XP_005265295 XP_006713272 | inside exon | inside | 78572 | inside exon | 0 | 14 | 14 | 3'UTR |
|
80321 | 13261 | 0.44 | FALSE |
| 158 | chr14 | 77597646 | 77597924 | 279 |
|
66.53822 | 18564.164 | 7116589 | 7116867 | 221 | 2474 | 0.6973118 | 0.0000000 | 0.0000000 | 0.0000000 | 2.7892473 | NaN | NaN | 1.000000e+100 | 0.0001816 | TRUE | 0.0231540 | TRUE | ZDHHC22 | NM_174976 NP_777636 XM_006720119 XM_006720120 XP_006720182 XP_006720183 | inside exon | inside | 10210 | inside exon | 0 | 3 | 3 | 3'UTR |
|
10521 | 6055 | 0.45 | FALSE |
| 159 | chr12 | 3152762 | 3153046 | 285 |
|
64.41004 | 18356.861 | 516732 | 517016 | 17 | 7995 | 0.5078947 | 0.0000000 | 0.0000000 | 0.0000000 | 2.0315789 | NaN | NaN | 1.000000e+100 | 0.0001895 | TRUE | 0.0240155 | TRUE | TEAD4 | NM_003213 NM_201441 NM_201443 NP_003204 NP_958849 NP_958851 | downstream | downstream | 84284 | NA | NA | NA | 13 | NA |
|
81364 | 45711 | 0.45 | FALSE |
| 160 | chr4 | 187517694 | 187517992 | 299 |
|
61.27940 | 18322.540 | 12660219 | 12660517 | 495 | 8642 | 0.4882943 | 0.0548495 | 0.0000000 | 0.0000000 | 1.8983278 | -1.000000e+100 | -1.000000e+100 | 5.113107e+00 | 0.0001908 | TRUE | 0.0240288 | TRUE | FAT1 | NM_005245 NP_005236 XM_005262834 XM_005262835 XM_006714139 XP_005262891 XP_005262892 XP_006714202 | inside exon | inside | 126995 | inside exon | 0 | 25 | 27 | inside transcription region |
|
136050 | 121235 | 0.45 | FALSE |
| 161 | chr12 | 8940981 | 8941259 | 279 |
|
65.48813 | 18271.188 | 1366629 | 1366907 | 52 | 8328 | 0.9578853 | 0.0000000 | 0.0000000 | 0.0000000 | 3.8315412 | NaN | NaN | 1.000000e+100 | 0.0001921 | TRUE | 0.0240419 | TRUE | RIMKLB | NM_020734 NP_065785 XM_006719116 XM_006719117 XM_006719118 XM_006719119 XM_006719120 XM_006719121 XM_006719122 XM_006719123 XM_006719124 XM_006719125 XM_006719126 XM_006719127 XM_006719128 XP_006719179 XP_006719180 XP_006719181 XP_006719182 XP_006719183 XP_006719184 XP_006719185 XP_006719186 XP_006719187 XP_006719188 XP_006719189 XP_006719190 XP_006719191 | NA | NA | 0 | NA | NA | NA | 9 | NA |
|
0 | 0 | 0.45 | FALSE |
| 162 | chr4 | 55944827 | 55945099 | 273 |
|
66.66094 | 18198.436 | 4546694 | 4546966 | 135 | 3976 | 0.7190476 | 0.1289377 | 0.0000000 | 0.1457875 | 2.6014652 | -1.000000e+100 | 1.771930e-01 | 4.334578e+00 | 0.0001959 | TRUE | 0.0243575 | TRUE | KDR | NM_002253 NP_002244 | inside exon | inside | 46663 | inside exon | 0 | 30 | 30 | 3'UTR |
|
47336 | 45352 | 0.45 | FALSE |
| 163 | chr17 | 42875872 | 42876263 | 392 |
|
45.78819 | 17948.971 | 8246543 | 8246934 | 204 | 7091 | 0.7116071 | 0.0000000 | 0.0816327 | 0.0780612 | 2.6867347 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0002082 | TRUE | 0.0257317 | TRUE | GJC1 | NM_001080383 NM_005497 NP_001073852 NP_005488 XM_005256920 XM_005256921 XP_005256977 XP_005256978 | inside exon | inside | 31916 | inside exon | 0 | 3 | 3 | 3'UTR |
|
32363 | 1190 | 0.46 | FALSE |
| 164 | chr19 | 45412265 | 45412647 | 383 |
|
46.28510 | 17727.193 | 9397278 | 9397660 | 286 | 3581 | 3.7096606 | 0.7263708 | 0.4699739 | 0.3618799 | 13.2804178 | -6.281255e-01 | -1.005195e+00 | 4.192451e+00 | 0.0002204 | TRUE | 0.0270692 | TRUE | APOE | NM_000041 NP_000032 XM_005258867 XP_005258924 | inside exon | inside | 3226 | inside exon | 0 | 4 | 4 | overlaps 3'UTR |
|
3611 | 2625 | 0.46 | FALSE |
| 165 | chr17 | 42877316 | 42877523 | 208 |
|
84.31504 | 17537.529 | 8247521 | 8247728 | 204 | 7091 | 0.7240385 | 0.0298077 | 0.0000000 | 0.0000000 | 2.8663462 | -1.000000e+100 | -1.000000e+100 | 6.587384e+00 | 0.0002296 | TRUE | 0.0279242 | TRUE | GJC1 | NM_001080383 NM_005497 NP_001073852 NP_005488 XM_005256920 XM_005256921 XP_005256977 XP_005256978 | inside exon | inside | 30656 | inside exon | 0 | 3 | 3 | 3'UTR |
|
32363 | 1190 | 0.46 | FALSE |
| 166 | chr16 | 3142738 | 3142928 | 191 |
|
91.78714 | 17531.344 | 1056170 | 1056360 | 35 | 10352 | 0.7159686 | 0.0000000 | 0.0000000 | 0.0680628 | 2.7958115 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0002301 | TRUE | 0.0279242 | TRUE | ZSCAN10 | NM_001282415 NM_001282416 NM_032805 NP_001269344 NP_001269345 NP_116194 | inside intron | inside | 6365 | inside intron | 421 | 2 | 5 | 5' UTR |
|
10398 | 1160 | 0.46 | FALSE |
| 167 | chr1 | 62672335 | 62672750 | 416 |
|
41.83657 | 17404.012 | 10230631 | 10231046 | 267 | 17384 | 4.7506010 | 2.0971154 | 1.9677885 | 1.6754808 | 13.2620192 | -9.183110e-02 | -3.238311e-01 | 2.660822e+00 | 0.0002377 | TRUE | 0.0286767 | TRUE | L1TD1 | NM_001164835 NM_019079 NP_001158307 NP_061952 | inside exon | inside | 11861 | inside exon | 0 | 4 | 5 | inside transcription region |
|
17527 | 4743 | 0.47 | FALSE |
| 168 | chr2 | 202901589 | 202901916 | 328 |
|
52.90786 | 17353.776 | 19695981 | 19696308 | 532 | 4463 | 3.2621951 | 1.5646341 | 1.0371951 | 0.7384146 | 9.7085366 | -5.931380e-01 | -1.083322e+00 | 2.633428e+00 | 0.0002406 | TRUE | 0.0288561 | TRUE | FZD7 | NM_003507 NP_003498 | inside exon | inside | 2279 | inside exon | 0 | 1 | 1 | 3'UTR |
|
3850 | 1724 | 0.47 | FALSE |
| 169 | chrX | 113702145 | 113702508 | 364 |
|
47.54117 | 17304.987 | 6939366 | 6939729 | 299 | 5443 | 1.0049451 | 0.0554945 | 0.0412088 | 0.0390110 | 3.8840659 | -4.293928e-01 | -5.084644e-01 | 6.129079e+00 | 0.0002429 | TRUE | 0.0289099 | TRUE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | upstream | upstream | 116043 | NA | NA | NA | 6 | NA |
|
326073 | 180632 | 0.47 | FALSE |
| 170 | chr10 | 53795194 | 53795486 | 293 |
|
58.99246 | 17284.791 | 5590361 | 5590653 | 138 | 5761 | 1.6184300 | 0.0000000 | 0.0000000 | 0.0000000 | 6.4737201 | NaN | NaN | 1.000000e+100 | 0.0002449 | TRUE | 0.0289099 | TRUE | PRKG1 | NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029 | inside intron | inside | 960960 | inside intron | 18758 | 6 | 18 | inside transcription region |
|
1223876 | 1219309 | 0.47 | FALSE |
| 171 | chr2 | 1636572 | 1636933 | 362 |
|
47.63749 | 17244.772 | 69331 | 69692 | 2 | 3615 | 1.2704420 | 1.1469613 | 0.0000000 | 0.0000000 | 3.9348066 | -1.000000e+100 | -1.000000e+100 | 1.778476e+00 | 0.0002471 | TRUE | 0.0289099 | TRUE | PXDN | NM_012293 NP_036425 XM_005264707 XM_006711896 XP_005264764 XP_006711959 | inside exon | inside | 111358 | inside exon | 0 | 23 | 23 | 3'UTR |
|
112632 | 110251 | 0.47 | FALSE |
| 172 | chr16 | 9764418 | 9764686 | 269 |
|
64.03400 | 17225.145 | 1951177 | 1951445 | 53 | 7029 | 0.6063197 | 0.0000000 | 0.0000000 | 0.0000000 | 2.4252788 | NaN | NaN | 1.000000e+100 | 0.0002479 | TRUE | 0.0289099 | TRUE | GRIN2A | NM_000833 NM_001134407 NM_001134408 NP_000824 NP_001127879 NP_001127880 XM_005255267 XM_005255268 XP_005255324 XP_005255325 | downstream | downstream | 511577 | NA | NA | NA | 13 | NA |
|
428998 | 417262 | 0.47 | FALSE |
| 173 | chr12 | 53291022 | 53291402 | 381 |
|
45.19639 | 17219.825 | 6336911 | 6337291 | 154 | 7844 | 3.4257218 | 0.7265092 | 0.6435696 | 0.7270341 | 11.6057743 | -1.748850e-01 | 1.042000e-03 | 3.997718e+00 | 0.0002483 | TRUE | 0.0289099 | TRUE | KRT8 | NM_001256282 NM_001256293 NM_002273 NP_001243211 NP_001243222 NP_002264 NR_045962 | inside exon | inside | 52248 | inside exon | 0 | 9 | 9 | overlaps 3'UTR |
|
52679 | 7553 | 0.47 | FALSE |
| 174 | chr5 | 141702405 | 141702576 | 172 |
|
99.82780 | 17170.382 | 12326979 | 12327150 | 384 | 14439 | 0.5017442 | 0.0000000 | 0.0000000 | 0.0000000 | 2.0069767 | NaN | NaN | 1.000000e+100 | 0.0002522 | TRUE | 0.0290650 | TRUE | SPRY4 | NM_001127496 NM_030964 NP_001120968 NP_112226 XM_005268518 XM_005268519 XM_006714798 XP_005268575 XP_005268576 XP_006714861 | inside intron | inside | 2044 | inside intron | -1833 | 1 | 3 | 5' UTR |
|
14628 | 5556 | 0.47 | FALSE |
| 175 | chr12 | 14858720 | 14859012 | 293 |
|
58.59039 | 17166.984 | 2665858 | 2666150 | 70 | 3841 | 3.2059727 | 0.4600683 | 1.0170648 | 0.9235495 | 10.4232082 | 1.144492e+00 | 1.005341e+00 | 4.501808e+00 | 0.0002525 | TRUE | 0.0290650 | TRUE | GUCY2C | NM_004963 NP_004954 | upstream | upstream | 9201 | NA | NA | NA | 27 | NA |
|
83951 | 83331 | 0.47 | FALSE |
| 176 | chr1 | 82456275 | 82456629 | 355 |
|
47.78197 | 16962.598 | 11405145 | 11405499 | 322 | 1848 | 0.8495775 | 0.1588732 | 0.0000000 | 0.0000000 | 3.2394366 | -1.000000e+100 | -1.000000e+100 | 4.349795e+00 | 0.0002638 | TRUE | 0.0301213 | TRUE | LPHN2 | NM_012302 NP_036434 XM_005270666 XM_005270667 XM_005270668 XM_005270670 XM_005270673 XM_005270674 XM_006710485 XM_006710486 XM_006710487 XM_006710488 XM_006710489 XM_006710490 XM_006710491 XM_006710492 XM_006710493 XM_006710494 XM_006710495 XM_006710496 XM_006710497 XP_005270723 XP_005270724 XP_005270725 XP_005270727 XP_005270730 XP_005270731 XP_006710548 XP_006710549 XP_006710550 XP_006710551 XP_006710552 XP_006710553 XP_006710554 XP_006710555 XP_006710556 XP_006710557 XP_006710558 XP_006710559 XP_006710560 | inside exon | inside | 40402 | inside exon | 0 | 17 | 17 | inside transcription region |
|
42234 | 40867 | 0.47 | FALSE |
| 177 | chr13 | 43443659 | 43443896 | 238 |
|
71.25309 | 16958.235 | 2382869 | 2383106 | 57 | 13438 | 2.8855042 | 0.0000000 | 0.1546218 | 0.0000000 | 11.3873950 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0002647 | TRUE | 0.0301213 | TRUE | EPSTI1 | NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959 | downstream | downstream | 122511 | NA | NA | NA | 13 | NA |
|
105883 | 103915 | 0.47 | FALSE |
| 178 | chr20 | 38898173 | 38898369 | 197 |
|
85.31833 | 16807.712 | 4400851 | 4401047 | 116 | 5560 | 0.8195431 | 0.0000000 | 0.0000000 | 0.0000000 | 3.2781726 | NaN | NaN | 1.000000e+100 | 0.0002745 | TRUE | 0.0310719 | TRUE | MAFB | NM_005461 NP_005452 | downstream | downstream | 419507 | NA | NA | NA | 1 | NA |
|
3359 | 971 | 0.47 | FALSE |
| 179 | chr15 | 55904491 | 55904733 | 243 |
|
69.04419 | 16777.738 | 4217348 | 4217590 | 141 | 5154 | 0.6771605 | 0.0000000 | 0.0000000 | 0.0000000 | 2.7086420 | NaN | NaN | 1.000000e+100 | 0.0002771 | TRUE | 0.0311905 | TRUE | PRTG | NM_173814 NP_776175 XM_005254310 XM_005254311 XM_006720473 XP_005254367 XP_005254368 XP_006720536 XR_429451 | inside exon | inside | 130444 | inside exon | 0 | 20 | 20 | 3'UTR |
|
131438 | 122919 | 0.47 | FALSE |
| 180 | chr13 | 56149564 | 56149785 | 222 |
|
75.29906 | 16716.392 | 3921997 | 3922218 | 121 | 13379 | 0.6331081 | 0.0000000 | 0.0000000 | 0.0000000 | 2.5324324 | NaN | NaN | 1.000000e+100 | 0.0002827 | TRUE | 0.0315100 | TRUE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.48 | FALSE |
| 181 | chr11 | 27639180 | 27639475 | 296 |
|
56.40421 | 16695.648 | 2971180 | 2971475 | 79 | 3618 | 0.8185811 | 0.1364865 | 0.0979730 | 0.0000000 | 3.0398649 | -4.783024e-01 | -1.000000e+100 | 4.477177e+00 | 0.0002844 | TRUE | 0.0315100 | TRUE | BDNF-AS | NR_002832 NR_033312 NR_033313 NR_033314 NR_033315 | NA | NA | 0 | NA | NA | NA | 7 | NA |
|
0 | 0 | 0.48 | FALSE |
| 182 | chr1 | 26751794 | 26751978 | 185 |
|
90.00906 | 16651.676 | 4578100 | 4578284 | 115 | 4415 | 3.7805405 | 0.0000000 | 0.1091892 | 0.1081081 | 14.9048649 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0002874 | TRUE | 0.0315100 | TRUE | LIN28A | NM_024674 NP_078950 XM_006710899 XM_006710900 XP_006710962 XP_006710963 | inside exon | inside | 14525 | inside exon | 0 | 3 | 4 | inside transcription region |
|
18950 | 15566 | 0.48 | FALSE |
| 183 | chr19 | 45411017 | 45411209 | 193 |
|
86.23534 | 16643.420 | 9396571 | 9396763 | 286 | 3581 | 8.4696891 | 1.0455959 | 0.7388601 | 0.7979275 | 31.2963731 | -5.009522e-01 | -3.899958e-01 | 4.903598e+00 | 0.0002875 | TRUE | 0.0315100 | TRUE | APOE | NM_000041 NP_000032 XM_005258867 XP_005258924 | inside exon | inside | 1978 | inside exon | 0 | 3 | 4 | inside transcription region |
|
3611 | 2625 | 0.48 | FALSE |
| 184 | chr5 | 12654924 | 12655113 | 190 |
|
87.51284 | 16627.439 | 572315 | 572504 | 28 | 11045 | 0.5563158 | 0.0000000 | 0.0000000 | 0.0000000 | 2.2252632 | NaN | NaN | 1.000000e+100 | 0.0002880 | TRUE | 0.0315100 | TRUE | LINC01194 | NR_033383 | NA | NA | 0 | NA | NA | NA | 3 | NA |
|
0 | 0 | 0.48 | FALSE |
| 185 | chr16 | 78011541 | 78011920 | 380 |
|
43.63403 | 16580.931 | 10468507 | 10468886 | 272 | 2496 | 0.8690789 | 0.0000000 | 0.1631579 | 0.0000000 | 3.3131579 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0002909 | TRUE | 0.0315100 | TRUE | VAT1L | NM_020927 NP_065978 | inside exon | inside | 189058 | inside exon | 0 | 9 | 9 | overlaps 3'UTR |
|
191518 | 189012 | 0.48 | FALSE |
| 186 | chr16 | 51171047 | 51171331 | 285 |
|
58.17580 | 16580.103 | 7327827 | 7328111 | 178 | 4772 | 0.9682456 | 0.0000000 | 0.0000000 | 0.0000000 | 3.8729825 | NaN | NaN | 1.000000e+100 | 0.0002909 | TRUE | 0.0315100 | TRUE | SALL1 | NM_001127892 NM_002968 NP_001121364 NP_002959 XM_006721241 XP_006721304 | inside exon | inside | 13852 | inside exon | 0 | 3 | 3 | inside transcription region |
|
14160 | 4818 | 0.48 | FALSE |
| 187 | chr3 | 181432039 | 181432215 | 177 |
|
93.48183 | 16546.284 | 16398282 | 16398458 | 513 | 2487 | 1.6810734 | 0.0000000 | 0.0000000 | 0.0000000 | 6.7242938 | NaN | NaN | 1.000000e+100 | 0.0002927 | TRUE | 0.0315337 | TRUE | SOX2 | NM_003106 NP_003097 | inside exon | inside | 2327 | inside exon | 0 | 1 | 1 | 3'UTR |
|
2511 | 953 | 0.48 | FALSE |
| 188 | chr12 | 97958447 | 97958752 | 306 |
|
53.61679 | 16406.737 | 10660467 | 10660772 | 300 | 1005 | 0.5341503 | 0.0000000 | 0.0000000 | 0.0000000 | 2.1366013 | NaN | NaN | 1.000000e+100 | 0.0003023 | TRUE | 0.0322374 | TRUE | RMST | NR_024037 | NA | NA | 0 | NA | NA | NA | 7 | NA |
|
0 | 0 | 0.48 | FALSE |
| 189 | chr13 | 56148503 | 56148852 | 350 |
|
46.86852 | 16403.982 | 3921119 | 3921468 | 121 | 13379 | 0.6100000 | 0.0000000 | 0.0000000 | 0.0000000 | 2.4400000 | NaN | NaN | 1.000000e+100 | 0.0003025 | TRUE | 0.0322374 | TRUE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.48 | FALSE |
| 190 | chr12 | 66358719 | 66358869 | 151 |
|
108.46248 | 16377.834 | 8151401 | 8151551 | 215 | 2964 | 1.3125828 | 0.0980132 | 0.0145695 | 0.0079470 | 5.1298013 | -2.750022e+00 | -3.624491e+00 | 5.709782e+00 | 0.0003047 | TRUE | 0.0323085 | TRUE | HMGA2 | NM_001015886 NM_003483 NM_003484 NP_003474 NP_003475 XM_005269164 XM_006719620 XP_005269221 XP_006719683 XR_245958 | inside exon | inside | 140479 | inside exon | 0 | 5 | 5 | 3'UTR |
|
141831 | 138021 | 0.48 | FALSE |
| 191 | chr2 | 1637465 | 1637799 | 335 |
|
48.80229 | 16348.767 | 70123 | 70457 | 2 | 3615 | 0.7753731 | 0.1856716 | 0.0000000 | 0.0298507 | 2.8859701 | -1.000000e+100 | -2.636915e+00 | 3.958231e+00 | 0.0003065 | TRUE | 0.0323276 | TRUE | PXDN | NM_012293 NP_036425 XM_005264707 XM_006711896 XP_005264764 XP_006711959 | inside exon | inside | 110492 | inside exon | 0 | 23 | 23 | 3'UTR |
|
112632 | 110251 | 0.48 | FALSE |
| 192 | chr17 | 47127429 | 47127676 | 248 |
|
65.22013 | 16174.592 | 9732837 | 9733084 | 231 | 18864 | 0.5397177 | 0.0000000 | 0.0000000 | 0.0000000 | 2.1588710 | NaN | NaN | 1.000000e+100 | 0.0003222 | TRUE | 0.0338101 | TRUE | IGF2BP1 | NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012 | inside exon | inside | 52655 | inside exon | 0 | 13 | 13 | 3'UTR |
|
58733 | 51698 | 0.48 | FALSE |
| 193 | chr12 | 86272123 | 86272347 | 225 |
|
71.65176 | 16121.645 | 9619548 | 9619772 | 270 | 4255 | 0.7911111 | 0.0968889 | 0.0000000 | 0.0000000 | 3.0675556 | -1.000000e+100 | -1.000000e+100 | 4.984614e+00 | 0.0003268 | TRUE | 0.0341091 | TRUE | NTS | NM_006183 NP_006174 | inside exon | inside | 4050 | inside exon | 0 | 3 | 4 | inside transcription region |
|
8697 | 7971 | 0.48 | FALSE |
| 194 | chr8 | 72615278 | 72615449 | 172 |
|
93.20441 | 16031.158 | 5588144 | 5588315 | 201 | 1824 | 0.7985465 | 0.0000000 | 0.0000000 | 0.0000000 | 3.1941860 | NaN | NaN | 1.000000e+100 | 0.0003354 | TRUE | 0.0348260 | TRUE | MSC | NM_005098 NP_005089 | downstream | downstream | 141282 | NA | NA | NA | 2 | NA |
|
2954 | 1517 | 0.48 | FALSE |
| 195 | chr15 | 26790432 | 26790719 | 288 |
|
55.55003 | 15998.410 | 474285 | 474572 | 11 | 4122 | 0.6944444 | 0.0000000 | 0.0000000 | 0.0000000 | 2.7777778 | NaN | NaN | 1.000000e+100 | 0.0003391 | TRUE | 0.0348541 | TRUE | GABRB3 | NM_000814 NM_001191320 NM_001191321 NM_001278631 NM_021912 NP_000805 NP_001178249 NP_001178250 NP_001265560 NP_068712 NR_103801 | inside exon | inside | 393967 | inside exon | 0 | 10 | 10 | 3'UTR |
|
395992 | 391643 | 0.48 | FALSE |
| 196 | chrX | 110790653 | 110790777 | 125 |
|
127.98424 | 15998.030 | 6862497 | 6862621 | 294 | 1078 | 0.6812000 | 0.0000000 | 0.1616000 | 0.0000000 | 2.5632000 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0003391 | TRUE | 0.0348541 | TRUE | LINC00890 | NR_033974 | NA | NA | 0 | NA | NA | NA | 3 | NA |
|
0 | 0 | 0.48 | FALSE |
| 197 | chr4 | 79464631 | 79465008 | 378 |
|
42.18790 | 15947.025 | 5859005 | 5859382 | 207 | 3243 | 0.8388889 | 0.0000000 | 0.1195767 | 0.0000000 | 3.2359788 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0003438 | TRUE | 0.0351582 | TRUE | FRAS1 | NM_001166133 NM_020875 NM_025074 NM_032863 NM_206841 NP_001159605 NP_079350 XM_006714314 XM_006714315 XM_006714316 XM_006714317 XP_006714377 XP_006714378 XP_006714379 XP_006714380 | inside exon | inside | 485907 | inside exon | 0 | 74 | 74 | 3'UTR |
|
486699 | 483114 | 0.49 | FALSE |
| 198 | chr16 | 65267282 | 65267527 | 246 |
|
64.49669 | 15866.185 | 8197449 | 8197694 | 214 | 5478 | 0.7569106 | 0.0000000 | 0.0000000 | 0.0000000 | 3.0276423 | NaN | NaN | 1.000000e+100 | 0.0003510 | TRUE | 0.0353071 | TRUE | LINC00922 | NM_001101346 NR_027755 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.49 | FALSE |
| 199 | chr2 | 5834481 | 5834771 | 291 |
|
54.52173 | 15865.825 | 204060 | 204350 | 16 | 8660 | 0.7340206 | 0.0116838 | 0.1353952 | 0.0694158 | 2.7195876 | 3.534589e+00 | 2.570749e+00 | 7.862729e+00 | 0.0003510 | TRUE | 0.0353071 | TRUE | SOX11 | NM_003108 NP_003099 | inside exon | inside | 1682 | inside exon | 0 | 1 | 1 | 3'UTR |
|
8718 | 1325 | 0.49 | FALSE |
| 200 | chr3 | 54669034 | 54669284 | 251 |
|
63.19846 | 15862.813 | 7093131 | 7093381 | 171 | 7351 | 0.7330677 | 0.0000000 | 0.0000000 | 0.0000000 | 2.9322709 | NaN | NaN | 1.000000e+100 | 0.0003513 | TRUE | 0.0353071 | TRUE | ESRG | NR_027122 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.49 | FALSE |
| 201 | chr12 | 59716601 | 59716802 | 202 |
|
78.46326 | 15849.578 | 7619014 | 7619215 | 197 | 6694 | 0.5435644 | 0.0000000 | 0.0000000 | 0.0000000 | 2.1742574 | NaN | NaN | 1.000000e+100 | 0.0003537 | TRUE | 0.0353071 | TRUE | SLC16A7 | NM_001270622 NM_001270623 NM_004731 NP_001257551 NP_001257552 NP_004722 NR_073055 NR_073056 XM_005269231 XM_006719693 XP_005269288 XP_006719756 | upstream | upstream | 273019 | NA | NA | NA | 6 | NA |
|
193814 | 74877 | 0.49 | FALSE |
| 202 | chr4 | 41259209 | 41259371 | 163 |
|
97.17744 | 15839.922 | 3752656 | 3752818 | 117 | 11482 | 0.9107362 | 0.0000000 | 0.0000000 | 0.0000000 | 3.6429448 | NaN | NaN | 1.000000e+100 | 0.0003540 | TRUE | 0.0353071 | TRUE | UCHL1 | NM_004181 NP_004172 | inside exon | inside | 311 | inside exon | 0 | 2 | 8 | 5' UTR |
|
11548 | 7357 | 0.49 | FALSE |
| 203 | chr13 | 51747682 | 51747849 | 168 |
|
94.02348 | 15795.945 | 3597419 | 3597586 | 92 | 10662 | 3.1461310 | 0.0000000 | 0.0321429 | 0.1976190 | 12.3547619 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0003589 | TRUE | 0.0355697 | TRUE | LINC00371 | NR_102431 NR_102432 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.49 | FALSE |
| 204 | chr15 | 78640269 | 78640559 | 291 |
|
54.21123 | 15775.468 | 7976705 | 7976995 | 233 | 291 | 2.0338488 | 0.1257732 | 0.0000000 | 0.0000000 | 8.0096220 | -1.000000e+100 | -1.000000e+100 | 5.992838e+00 | 0.0003602 | TRUE | 0.0355697 | TRUE | CRABP1 | NM_004378 NP_004369 | inside exon | inside | 7603 | inside exon | 0 | 4 | 4 | overlaps 3'UTR |
|
7906 | 7548 | 0.49 | FALSE |
| 205 | chr15 | 65623388 | 65623552 | 165 |
|
95.20893 | 15709.474 | 5965529 | 5965693 | 184 | 8664 | 0.8603030 | 0.0000000 | 0.0000000 | 0.0000000 | 3.4412121 | NaN | NaN | 1.000000e+100 | 0.0003677 | TRUE | 0.0361295 | TRUE | IGDCC3 | NM_004884 NP_004875 | inside exon | inside | 25158 | inside exon | 0 | 8 | 12 | inside transcription region |
|
26982 | 6564 | 0.49 | FALSE |
| 206 | chr7 | 83093323 | 83093530 | 208 |
|
75.17445 | 15636.285 | 8281928 | 8282135 | 218 | 5588 | 0.7120192 | 0.0000000 | 0.0000000 | 0.0000000 | 2.8480769 | NaN | NaN | 1.000000e+100 | 0.0003740 | TRUE | 0.0365728 | TRUE | SEMA3E | NM_001178129 NM_012431 NP_001171600 NP_036563 XM_006716187 XP_006716250 | inside intron | inside | 184949 | inside intron | -2268 | 4 | 17 | inside transcription region |
|
285257 | 280956 | 0.49 | FALSE |
| 207 | chr5 | 141691149 | 141691465 | 317 |
|
49.05286 | 15549.758 | 12324643 | 12324959 | 384 | 14439 | 1.2009464 | 0.0643533 | 0.0000000 | 0.0000000 | 4.7394322 | -1.000000e+100 | -1.000000e+100 | 6.202556e+00 | 0.0003836 | TRUE | 0.0371794 | TRUE | SPRY4 | NM_001127496 NM_030964 NP_001120968 NP_112226 XM_005268518 XM_005268519 XM_006714798 XP_005268575 XP_005268576 XP_006714861 | inside exon | inside | 13155 | inside exon | 0 | 3 | 3 | 3'UTR |
|
14628 | 5556 | 0.49 | FALSE |
| 208 | chr2 | 241656293 | 241656499 | 207 |
|
75.08310 | 15542.202 | 23643095 | 23643301 | 634 | 13166 | 0.5500000 | 0.0000000 | 0.0000000 | 0.0000000 | 2.2000000 | NaN | NaN | 1.000000e+100 | 0.0003839 | TRUE | 0.0371794 | TRUE | KIF1A | NM_001244008 NM_004321 NP_001230937 NP_004312 XM_005247022 XM_005247023 XM_005247024 XM_005247026 XM_005247027 XM_005247028 XM_006712601 XM_006712602 XM_006712603 XM_006712604 XM_006712605 XP_005247079 XP_005247080 XP_005247081 XP_005247083 XP_005247084 XP_005247085 XP_006712664 XP_006712665 XP_006712666 XP_006712667 XP_006712668 | inside exon | inside | 103226 | inside exon | 0 | 49 | 49 | 3'UTR |
|
106544 | 80388 | 0.49 | FALSE |
| 209 | chr22 | 45938035 | 45938163 | 129 |
|
120.31276 | 15520.346 | 5802240 | 5802368 | 151 | 2298 | 2.2779070 | 0.0496124 | 0.5503876 | 0.4682171 | 8.0434109 | 3.471675e+00 | 3.238405e+00 | 7.340963e+00 | 0.0003868 | TRUE | 0.0372144 | TRUE | FBLN1 | NM_001996 NM_006485 NM_006486 NM_006487 NP_001987 NP_006476 NP_006477 NP_006478 | inside exon | inside | 39316 | inside exon | 0 | 10 | 17 | inside transcription region |
|
98295 | 97460 | 0.49 | FALSE |
| 210 | chr1 | 156640863 | 156641065 | 203 |
|
76.41499 | 15512.243 | 19869882 | 19870084 | 536 | 8487 | 1.3009852 | 0.9004926 | 0.0000000 | 0.0679803 | 4.2354680 | -1.000000e+100 | -3.727526e+00 | 2.233735e+00 | 0.0003879 | TRUE | 0.0372144 | TRUE | NES | NM_006617 NP_006608 | inside exon | inside | 6124 | inside exon | 0 | 4 | 4 | inside transcription region |
|
8633 | 7942 | 0.49 | FALSE |
| 211 | chr2 | 47606908 | 47607108 | 201 |
|
77.03507 | 15484.050 | 5239078 | 5239278 | 126 | 1012 | 1.1281095 | 0.0000000 | 0.0338308 | 0.1482587 | 4.3303483 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0003910 | TRUE | 0.0373323 | TRUE | EPCAM | NM_002354 NP_002345 | inside exon | inside | 10621 | inside exon | 0 | 7 | 9 | inside transcription region |
|
17880 | 17107 | 0.49 | FALSE |
| 212 | chr13 | 100637200 | 100637363 | 164 |
|
94.11675 | 15435.148 | 5450272 | 5450435 | 193 | 5501 | 1.0506098 | 0.0000000 | 0.0000000 | 0.0000000 | 4.2024390 | NaN | NaN | 1.000000e+100 | 0.0003954 | TRUE | 0.0375724 | TRUE | ZIC2 | NM_007129 NP_009060 | inside exon | inside | 3174 | inside exon | 0 | 2 | 3 | inside transcription region |
|
4993 | 3617 | 0.49 | FALSE |
| 213 | chr10 | 53796051 | 53796454 | 404 |
|
38.12607 | 15402.930 | 5590917 | 5591320 | 138 | 5761 | 1.1121287 | 0.2915842 | 0.0985149 | 0.0485149 | 4.0099010 | -1.565499e+00 | -2.587414e+00 | 3.781582e+00 | 0.0003982 | TRUE | 0.0376568 | TRUE | PRKG1 | NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029 | inside intron | inside | 961817 | inside intron | 17790 | 6 | 18 | inside transcription region |
|
1223876 | 1219309 | 0.49 | FALSE |
| 214 | chr4 | 187518012 | 187518253 | 242 |
|
63.47009 | 15359.763 | 12660537 | 12660778 | 495 | 8642 | 0.7297521 | 0.0677686 | 0.0000000 | 0.0000000 | 2.8512397 | -1.000000e+100 | -1.000000e+100 | 5.394829e+00 | 0.0004024 | TRUE | 0.0378778 | TRUE | FAT1 | NM_005245 NP_005236 XM_005262834 XM_005262835 XM_006714139 XP_005262891 XP_005262892 XP_006714202 | inside exon | inside | 126734 | inside exon | 0 | 25 | 27 | inside transcription region |
|
136050 | 121235 | 0.49 | FALSE |
| 215 | chr6 | 114744658 | 114744839 | 182 |
|
84.23988 | 15331.658 | 11096100 | 11096281 | 302 | 5708 | 1.7788462 | 0.0000000 | 0.0000000 | 0.0000000 | 7.1153846 | NaN | NaN | 1.000000e+100 | 0.0004066 | TRUE | 0.0380869 | TRUE | HS3ST5 | NM_153612 NP_705840 XM_006715379 XP_006715442 | upstream | upstream | 81118 | NA | NA | NA | 5 | NA |
|
286790 | 5588 | 0.50 | FALSE |
| 216 | chr13 | 43442889 | 43443130 | 242 |
|
63.28694 | 15315.440 | 2382406 | 2382647 | 57 | 13438 | 2.3822314 | 0.2297521 | 0.3338843 | 0.1661157 | 8.7991736 | 5.392704e-01 | -4.678894e-01 | 5.259218e+00 | 0.0004084 | TRUE | 0.0380869 | TRUE | EPSTI1 | NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959 | downstream | downstream | 123277 | NA | NA | NA | 13 | NA |
|
105883 | 103915 | 0.50 | FALSE |
| 217 | chr20 | 31396719 | 31397160 | 442 |
|
34.47672 | 15238.711 | 2811200 | 2811641 | 85 | 24597 | 6.9459276 | 2.0217195 | 2.9633484 | 3.3936652 | 19.4049774 | 5.516454e-01 | 7.472614e-01 | 3.262772e+00 | 0.0004168 | TRUE | 0.0386944 | TRUE | DNMT3B | NM_001207055 NM_001207056 NM_006892 NM_175848 NM_175849 NM_175850 NP_001193984 NP_001193985 NP_008823 NP_787044 NP_787045 NP_787046 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.50 | FALSE |
| 218 | chr2 | 202902438 | 202902757 | 320 |
|
47.40455 | 15169.455 | 19696830 | 19697149 | 532 | 4463 | 2.6135937 | 0.5362500 | 0.7631250 | 0.7468750 | 8.4081250 | 5.090136e-01 | 4.779611e-01 | 3.970807e+00 | 0.0004248 | TRUE | 0.0391021 | TRUE | FZD7 | NM_003507 NP_003498 | inside exon | inside | 3128 | inside exon | 0 | 1 | 1 | 3'UTR |
|
3850 | 1724 | 0.50 | FALSE |
| 219 | chr15 | 26789903 | 26790131 | 229 |
|
66.22928 | 15166.504 | 473824 | 474052 | 11 | 4122 | 0.8495633 | 0.0000000 | 0.0131004 | 0.0000000 | 3.3851528 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0004251 | TRUE | 0.0391021 | TRUE | GABRB3 | NM_000814 NM_001191320 NM_001191321 NM_001278631 NM_021912 NP_000805 NP_001178249 NP_001178250 NP_001265560 NP_068712 NR_103801 | inside exon | inside | 394555 | inside exon | 0 | 10 | 10 | 3'UTR |
|
395992 | 391643 | 0.50 | FALSE |
| 220 | chr1 | 82456730 | 82456962 | 233 |
|
64.78509 | 15094.925 | 11405513 | 11405745 | 322 | 1848 | 0.9006438 | 0.0248927 | 0.0000000 | 0.0000000 | 3.5776824 | -1.000000e+100 | -1.000000e+100 | 7.167159e+00 | 0.0004332 | TRUE | 0.0396041 | TRUE | LPHN2 | NM_012302 NP_036434 XM_005270666 XM_005270667 XM_005270668 XM_005270670 XM_005270673 XM_005270674 XM_006710485 XM_006710486 XM_006710487 XM_006710488 XM_006710489 XM_006710490 XM_006710491 XM_006710492 XM_006710493 XM_006710494 XM_006710495 XM_006710496 XM_006710497 XP_005270723 XP_005270724 XP_005270725 XP_005270727 XP_005270730 XP_005270731 XP_006710548 XP_006710549 XP_006710550 XP_006710551 XP_006710552 XP_006710553 XP_006710554 XP_006710555 XP_006710556 XP_006710557 XP_006710558 XP_006710559 XP_006710560 | inside exon | inside | 40857 | inside exon | 0 | 17 | 17 | overlaps 3'UTR |
|
42234 | 40867 | 0.50 | FALSE |
| 221 | chr3 | 54668710 | 54669019 | 310 |
|
48.63176 | 15075.847 | 7092821 | 7093130 | 171 | 7351 | 1.6266129 | 0.1303226 | 0.1954839 | 0.1954839 | 5.9851613 | 5.849625e-01 | 5.849625e-01 | 5.521231e+00 | 0.0004363 | TRUE | 0.0396041 | TRUE | ESRG | NR_027122 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.50 | FALSE |
| 222 | chrX | 113704150 | 113704496 | 347 |
|
43.43679 | 15072.566 | 6940951 | 6941297 | 299 | 5443 | 2.6778098 | 0.1279539 | 0.1527378 | 0.2576369 | 10.1729107 | 2.554327e-01 | 1.009715e+00 | 6.312965e+00 | 0.0004364 | TRUE | 0.0396041 | TRUE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | upstream | upstream | 114055 | NA | NA | NA | 6 | NA |
|
326073 | 180632 | 0.50 | FALSE |
| 223 | chr2 | 5841087 | 5841512 | 426 |
|
35.31585 | 15044.551 | 206324 | 206749 | 16 | 8660 | 0.7922535 | 0.1422535 | 0.0807512 | 0.0000000 | 2.9460094 | -8.169092e-01 | -1.000000e+100 | 4.372226e+00 | 0.0004390 | TRUE | 0.0396609 | TRUE | SOX11 | NM_003108 NP_003099 | inside exon | inside | 8288 | inside exon | 0 | 1 | 1 | 3'UTR |
|
8718 | 1325 | 0.50 | FALSE |
| 224 | chr2 | 168729265 | 168729344 | 80 |
|
187.44600 | 14995.680 | 16192157 | 16192236 | 428 | 1807 | 0.4981250 | 0.0000000 | 0.0000000 | 0.0000000 | 1.9925000 | NaN | NaN | 1.000000e+100 | 0.0004434 | TRUE | 0.0398778 | TRUE | B3GALT1 | NM_020981 NP_066191 XM_005246931 XM_006712819 XP_005246988 XP_006712882 | downstream | downstream | 54083 | NA | NA | NA | 2 | NA |
|
52184 | 980 | 0.50 | FALSE |
| 225 | chr18 | 6949100 | 6949258 | 159 |
|
93.96821 | 14940.945 | 515514 | 515672 | 17 | 3800 | 0.6386792 | 0.0000000 | 0.0000000 | 0.0000000 | 2.5547170 | NaN | NaN | 1.000000e+100 | 0.0004494 | TRUE | 0.0402379 | TRUE | LAMA1 | NM_005559 NP_005550 | inside exon | inside | 168555 | inside exon | 0 | 58 | 62 | inside transcription region |
|
176070 | 95663 | 0.50 | FALSE |
| 226 | chr8 | 114523076 | 114523264 | 189 |
|
78.84354 | 14901.428 | 8020886 | 8021074 | 290 | 3097 | 1.0222222 | 0.0000000 | 0.0000000 | 0.0000000 | 4.0888889 | NaN | NaN | 1.000000e+100 | 0.0004544 | TRUE | 0.0405081 | TRUE | CSMD3 | NM_052900 NM_198123 NM_198124 NP_443132 NP_937756 NP_937757 | upstream | upstream | 73834 | NA | NA | NA | 71 | NA |
|
1214083 | 1212083 | 0.50 | FALSE |
| 227 | chr3 | 57124729 | 57125025 | 297 |
|
50.10517 | 14881.234 | 7279023 | 7279319 | 180 | 8154 | 0.7171717 | 0.0000000 | 0.0000000 | 0.0000000 | 2.8686869 | NaN | NaN | 1.000000e+100 | 0.0004570 | TRUE | 0.0405600 | TRUE | IL17RD | NM_017563 NP_060033 XM_005265238 XM_006713209 XP_005265295 XP_006713272 | inside exon | inside | 79306 | inside exon | 0 | 14 | 14 | 3'UTR |
|
80321 | 13261 | 0.50 | FALSE |
| 228 | chr5 | 2746603 | 2746840 | 238 |
|
62.36840 | 14843.680 | 284218 | 284455 | 9 | 3022 | 0.4197479 | 0.0000000 | 0.0000000 | 0.0000000 | 1.6789916 | NaN | NaN | 1.000000e+100 | 0.0004635 | TRUE | 0.0407129 | TRUE | IRX2 | NM_001134222 NM_033267 NP_001127694 NP_150366 | inside exon | inside | 4929 | inside exon | 0 | 4 | 4 | 3'UTR |
|
5490 | 3849 | 0.50 | FALSE |
| 229 | chr3 | 54671141 | 54671460 | 320 |
|
46.38042 | 14841.736 | 7094812 | 7095131 | 171 | 7351 | 0.7034375 | 0.0000000 | 0.0000000 | 0.0000000 | 2.8137500 | NaN | NaN | 1.000000e+100 | 0.0004637 | TRUE | 0.0407129 | TRUE | ESRG | NR_027122 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.50 | FALSE |
| 230 | chr14 | 93401366 | 93401625 | 260 |
|
57.01624 | 14824.223 | 8680022 | 8680281 | 253 | 12111 | 1.3838462 | 0.0000000 | 0.0000000 | 0.2330769 | 5.3023077 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0004648 | TRUE | 0.0407129 | TRUE | CHGA | NM_001275 NP_001266 XM_005267292 XM_006725160 XP_005267349 XP_006725223 | inside exon | inside | 11921 | inside exon | 0 | 7 | 7 | 3'UTR |
|
12193 | 11524 | 0.50 | FALSE |
| 231 | chr6 | 114748691 | 114749092 | 402 |
|
36.71851 | 14760.840 | 11099959 | 11100360 | 302 | 5708 | 0.6201493 | 0.0000000 | 0.0000000 | 0.0000000 | 2.4805970 | NaN | NaN | 1.000000e+100 | 0.0004718 | TRUE | 0.0411450 | TRUE | HS3ST5 | NM_153612 NP_705840 XM_006715379 XP_006715442 | upstream | upstream | 85151 | NA | NA | NA | 5 | NA |
|
286790 | 5588 | 0.50 | FALSE |
| 232 | chr1 | 156641850 | 156642069 | 220 |
|
66.86782 | 14710.920 | 19870849 | 19871068 | 536 | 8487 | 0.6597727 | 0.2218182 | 0.0000000 | 0.0000000 | 2.4172727 | -1.000000e+100 | -1.000000e+100 | 3.445931e+00 | 0.0004776 | TRUE | 0.0413528 | TRUE | NES | NM_006617 NP_006608 | inside exon | inside | 5120 | inside exon | 0 | 4 | 4 | inside transcription region |
|
8633 | 7942 | 0.50 | FALSE |
| 233 | chr16 | 78013224 | 78013548 | 325 |
|
45.24092 | 14703.299 | 10469639 | 10469963 | 272 | 2496 | 1.0130769 | 0.0000000 | 0.1046154 | 0.4178462 | 3.5298462 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0004783 | TRUE | 0.0413528 | TRUE | VAT1L | NM_020927 NP_065978 | inside exon | inside | 190741 | inside exon | 0 | 9 | 9 | 3'UTR |
|
191518 | 189012 | 0.50 | FALSE |
| 234 | chr12 | 10487462 | 10487578 | 117 |
|
125.30742 | 14660.968 | 1855010 | 1855126 | 56 | 1469 | 1.7461538 | 0.5709402 | 0.8683761 | 0.1333333 | 5.4119658 | 6.049804e-01 | -2.098302e+00 | 3.244741e+00 | 0.0004843 | TRUE | 0.0416856 | TRUE | KLRD1 | NM_001114396 NM_002262 NM_007334 NP_001107868 NP_002253 NP_031360 XM_005253363 XM_006719065 XM_006719066 XM_006719067 XM_006719068 XP_005253420 XP_006719128 XP_006719129 XP_006719130 XP_006719131 | downstream | downstream | 30412 | NA | NA | NA | 7 | NA |
|
12800 | 6715 | 0.50 | FALSE |
| 235 | chr4 | 187509716 | 187509925 | 210 |
|
69.73679 | 14644.725 | 12659583 | 12659792 | 494 | 1741 | 0.6869048 | 0.0000000 | 0.0000000 | 0.0000000 | 2.7476190 | NaN | NaN | 1.000000e+100 | 0.0004874 | TRUE | 0.0416856 | TRUE | FAT1 | NM_005245 NP_005236 XM_005262834 XM_005262835 XM_006714139 XP_005262891 XP_005262892 XP_006714202 | inside exon | inside | 135062 | inside exon | 0 | 27 | 27 | overlaps 3'UTR |
|
136050 | 121235 | 0.50 | FALSE |
| 236 | chr11 | 102103810 | 102104049 | 240 |
|
60.96828 | 14632.386 | 10978011 | 10978250 | 335 | 3102 | 1.3406250 | 0.4650000 | 0.0108333 | 0.4150000 | 4.4716667 | -5.423682e+00 | -1.641194e-01 | 3.265510e+00 | 0.0004883 | TRUE | 0.0416856 | TRUE | YAP1 | NM_001130145 NM_001195044 NM_001195045 NM_001282097 NM_001282098 NM_001282099 NM_001282100 NM_001282101 NM_006106 NP_001123617 NP_001181973 NP_001181974 NP_001269026 NP_001269027 NP_001269028 NP_001269029 NP_001269030 NP_006097 XM_005271378 XM_005271380 XM_005271381 XM_005271383 XP_005271435 XP_005271437 XP_005271438 XP_005271440 | inside exon | inside | 47061 | inside exon | 0 | 6 | 6 | 3'UTR |
|
47405 | 43893 | 0.50 | FALSE |
| 237 | chr8 | 129626267 | 129626390 | 124 |
|
117.11467 | 14522.219 | 9527392 | 9527515 | 315 | 862 | 0.7423387 | 0.0000000 | 0.1629032 | 0.0000000 | 2.8064516 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0005021 | TRUE | 0.0425161 | TRUE | MIR1208 | NR_031613 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.51 | FALSE |
| 238 | chr13 | 100616722 | 100616918 | 197 |
|
73.71076 | 14521.021 | 5448440 | 5448636 | 191 | 2995 | 0.5101523 | 0.0000000 | 0.0000000 | 0.0000000 | 2.0406091 | NaN | NaN | 1.000000e+100 | 0.0005023 | TRUE | 0.0425161 | TRUE | ZIC5 | NM_033132 NP_149123 | inside exon | inside | 7260 | inside exon | 0 | 2 | 2 | 3'UTR |
|
8903 | 6298 | 0.51 | FALSE |
| 239 | chr10 | 53799041 | 53799318 | 278 |
|
52.06027 | 14472.754 | 5592092 | 5592369 | 138 | 5761 | 0.7820144 | 0.0726619 | 0.0726619 | 0.0000000 | 2.9827338 | 0.000000e+00 | -1.000000e+100 | 5.359293e+00 | 0.0005081 | TRUE | 0.0428305 | TRUE | PRKG1 | NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029 | inside intron | inside | 964807 | inside intron | 14926 | 6 | 18 | inside transcription region |
|
1223876 | 1219309 | 0.51 | FALSE |
| 240 | chr12 | 53295648 | 53295856 | 209 |
|
69.05098 | 14431.655 | 6338020 | 6338228 | 154 | 7844 | 3.4677033 | 0.9416268 | 1.8727273 | 0.4813397 | 10.5751196 | 9.919135e-01 | -9.680999e-01 | 3.489375e+00 | 0.0005145 | TRUE | 0.0431830 | TRUE | KRT8 | NM_001256282 NM_001256293 NM_002273 NP_001243211 NP_001243222 NP_002264 NR_045962 | inside exon | inside | 47794 | inside exon | 0 | 3 | 9 | inside transcription region |
|
52679 | 7553 | 0.51 | FALSE |
| 241 | chr12 | 8948206 | 8948383 | 178 |
|
80.96385 | 14411.565 | 1368060 | 1368237 | 52 | 8328 | 1.0963483 | 0.0000000 | 0.0000000 | 0.0000000 | 4.3853933 | NaN | NaN | 1.000000e+100 | 0.0005175 | TRUE | 0.0432615 | TRUE | RIMKLB | NM_020734 NP_065785 XM_006719116 XM_006719117 XM_006719118 XM_006719119 XM_006719120 XM_006719121 XM_006719122 XM_006719123 XM_006719124 XM_006719125 XM_006719126 XM_006719127 XM_006719128 XP_006719179 XP_006719180 XP_006719181 XP_006719182 XP_006719183 XP_006719184 XP_006719185 XP_006719186 XP_006719187 XP_006719188 XP_006719189 XP_006719190 XP_006719191 | NA | NA | 0 | NA | NA | NA | 9 | NA |
|
0 | 0 | 0.51 | FALSE |
| 242 | chr8 | 41122804 | 41123008 | 205 |
|
70.20977 | 14393.003 | 3333326 | 3333530 | 129 | 3517 | 1.0956098 | 0.0000000 | 0.0000000 | 0.0000000 | 4.3824390 | NaN | NaN | 1.000000e+100 | 0.0005198 | TRUE | 0.0432718 | TRUE | SFRP1 | NM_003012 NP_003003 | inside exon | inside | 43982 | inside exon | 0 | 3 | 3 | inside transcription region |
|
47514 | 43992 | 0.51 | FALSE |
| 243 | chrX | 5808744 | 5809081 | 338 |
|
42.51242 | 14369.196 | 648510 | 648847 | 19 | 2072 | 0.6162722 | 0.0508876 | 0.1502959 | 0.0597633 | 2.2041420 | 1.562420e+00 | 2.319467e-01 | 5.436760e+00 | 0.0005224 | TRUE | 0.0433089 | TRUE | NLGN4X | NM_001282145 NM_001282146 NM_020742 NM_181332 NP_001269074 NP_001269075 NP_065793 NP_851849 XM_005274564 XM_005274565 XM_005274566 XM_005274568 XM_006724504 XP_005274621 XP_005274622 XP_005274623 XP_005274625 XP_006724567 | inside exon | inside | 337625 | inside exon | 0 | 7 | 7 | 3'UTR |
|
338623 | 258649 | 0.51 | FALSE |
| 244 | chr5 | 141693647 | 141693806 | 160 |
|
89.11364 | 14258.183 | 12326074 | 12326233 | 384 | 14439 | 0.6993750 | 0.0000000 | 0.0000000 | 0.0000000 | 2.7975000 | NaN | NaN | 1.000000e+100 | 0.0005390 | TRUE | 0.0444974 | TRUE | SPRY4 | NM_001127496 NM_030964 NP_001120968 NP_112226 XM_005268518 XM_005268519 XM_006714798 XP_005268575 XP_005268576 XP_006714861 | inside exon | inside | 10814 | inside exon | 0 | 3 | 3 | overlaps 3'UTR |
|
14628 | 5556 | 0.51 | FALSE |
| 245 | chr6 | 121756811 | 121756978 | 168 |
|
84.62158 | 14216.426 | 11635099 | 11635266 | 324 | 168 | 2.4556548 | 0.6083333 | 0.0000000 | 0.0000000 | 9.2142857 | -1.000000e+100 | -1.000000e+100 | 3.920938e+00 | 0.0005443 | TRUE | 0.0447560 | TRUE | GJA1 | NM_000165 NP_000156 | inside exon | inside | 66 | inside exon | 0 | 1 | 2 | 5' UTR |
|
14128 | 1148 | 0.51 | FALSE |
| 246 | chr6 | 114747247 | 114747401 | 155 |
|
91.47193 | 14178.149 | 11098656 | 11098810 | 302 | 5708 | 1.3129032 | 0.0000000 | 0.0000000 | 0.0000000 | 5.2516129 | NaN | NaN | 1.000000e+100 | 0.0005505 | TRUE | 0.0450788 | TRUE | HS3ST5 | NM_153612 NP_705840 XM_006715379 XP_006715442 | upstream | upstream | 83707 | NA | NA | NA | 5 | NA |
|
286790 | 5588 | 0.51 | FALSE |
| 247 | chr3 | 109045220 | 109045656 | 437 |
|
32.27994 | 14106.336 | 10141701 | 10142137 | 311 | 11345 | 8.0924485 | 3.5208238 | 2.8970252 | 4.0878719 | 21.8640732 | -2.813408e-01 | 2.154369e-01 | 2.634577e+00 | 0.0005615 | TRUE | 0.0452911 | TRUE | DPPA4 | NM_018189 NP_060659 | inside exon | inside | 10763 | inside exon | 0 | 6 | 6 | 3'UTR |
|
11431 | 8594 | 0.51 | FALSE |
| 248 | chr1 | 156642819 | 156642997 | 179 |
|
78.76910 | 14099.669 | 19871632 | 19871810 | 536 | 8487 | 0.6022346 | 0.3318436 | 0.0000000 | 0.0000000 | 2.0770950 | -1.000000e+100 | -1.000000e+100 | 2.645992e+00 | 0.0005623 | TRUE | 0.0452911 | TRUE | NES | NM_006617 NP_006608 | inside exon | inside | 4192 | inside exon | 0 | 4 | 4 | inside transcription region |
|
8633 | 7942 | 0.51 | FALSE |
| 249 | chr3 | 54667941 | 54668161 | 221 |
|
63.76629 | 14092.350 | 7092251 | 7092471 | 171 | 7351 | 0.6542986 | 0.0000000 | 0.0000000 | 0.0000000 | 2.6171946 | NaN | NaN | 1.000000e+100 | 0.0005633 | TRUE | 0.0452911 | TRUE | ESRG | NR_027122 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.51 | FALSE |
| 250 | chr17 | 47133250 | 47133444 | 195 |
|
72.23499 | 14085.823 | 9737675 | 9737869 | 231 | 18864 | 1.2092308 | 0.0000000 | 0.0000000 | 0.0000000 | 4.8369231 | NaN | NaN | 1.000000e+100 | 0.0005644 | TRUE | 0.0452911 | TRUE | IGF2BP1 | NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012 | inside exon | inside | 58476 | inside exon | 0 | 13 | 13 | 3'UTR |
|
58733 | 51698 | 0.51 | FALSE |
| 251 | chr2 | 67566158 | 67566385 | 228 |
|
61.69828 | 14067.208 | 7344777 | 7345004 | 170 | 8050 | 0.5574561 | 0.0000000 | 0.0000000 | 0.0000000 | 2.2298246 | NaN | NaN | 1.000000e+100 | 0.0005675 | TRUE | 0.0452911 | TRUE | ETAA1 | NM_019002 NP_061875 XM_005264374 XM_005264375 XM_005264376 XM_005264377 XM_005264378 XP_005264431 XP_005264432 XP_005264433 XP_005264434 XP_005264435 | upstream | upstream | 58057 | NA | NA | NA | 6 | NA |
|
13091 | 12589 | 0.51 | FALSE |
| 252 | chr1 | 55529702 | 55529973 | 272 |
|
51.70488 | 14063.727 | 9839389 | 9839660 | 252 | 890 | 0.8104779 | 0.0000000 | 0.0000000 | 0.0000000 | 3.2419118 | NaN | NaN | 1.000000e+100 | 0.0005685 | TRUE | 0.0452911 | TRUE | PCSK9 | NM_174936 NP_777596 NR_110451 | NA | NA | 0 | NA | NA | NA | 10 | NA |
|
0 | 0 | 0.51 | FALSE |
| 253 | chr14 | 74825178 | 74825332 | 155 |
|
90.70896 | 14059.890 | 6617239 | 6617393 | 201 | 3221 | 0.8516129 | 0.0000000 | 0.0000000 | 0.0000000 | 3.4064516 | NaN | NaN | 1.000000e+100 | 0.0005688 | TRUE | 0.0452911 | TRUE | VRTN | NM_018228 NP_060698 | inside exon | inside | 10012 | inside exon | 0 | 2 | 2 | inside transcription region |
|
11545 | 2108 | 0.51 | FALSE |
| 254 | chr12 | 8940747 | 8940924 | 178 |
|
78.74957 | 14017.424 | 1366451 | 1366628 | 52 | 8328 | 1.1064607 | 0.0000000 | 0.0000000 | 0.0000000 | 4.4258427 | NaN | NaN | 1.000000e+100 | 0.0005776 | TRUE | 0.0458075 | TRUE | RIMKLB | NM_020734 NP_065785 XM_006719116 XM_006719117 XM_006719118 XM_006719119 XM_006719120 XM_006719121 XM_006719122 XM_006719123 XM_006719124 XM_006719125 XM_006719126 XM_006719127 XM_006719128 XP_006719179 XP_006719180 XP_006719181 XP_006719182 XP_006719183 XP_006719184 XP_006719185 XP_006719186 XP_006719187 XP_006719188 XP_006719189 XP_006719190 XP_006719191 | NA | NA | 0 | NA | NA | NA | 9 | NA |
|
0 | 0 | 0.51 | FALSE |
| 255 | chr15 | 65623772 | 65623997 | 226 |
|
61.89960 | 13989.310 | 5965710 | 5965935 | 184 | 8664 | 0.5117257 | 0.0000000 | 0.0000000 | 0.0000000 | 2.0469027 | NaN | NaN | 1.000000e+100 | 0.0005855 | TRUE | 0.0462558 | TRUE | IGDCC3 | NM_004884 NP_004875 | inside exon | inside | 24713 | inside exon | 0 | 7 | 12 | inside transcription region |
|
26982 | 6564 | 0.51 | FALSE |
| 256 | chr4 | 93523391 | 93523525 | 135 |
|
103.47669 | 13969.354 | 7118237 | 7118371 | 252 | 3836 | 0.6340741 | 0.0000000 | 0.0000000 | 0.0000000 | 2.5362963 | NaN | NaN | 1.000000e+100 | 0.0005883 | TRUE | 0.0462646 | TRUE | GRID2 | NM_001286838 NM_001510 NP_001273767 NP_001501 XM_006714195 XP_006714258 | inside intron | inside | 297841 | inside intron | -11954 | 2 | 15 | inside transcription region |
|
1468099 | 1467841 | 0.51 | FALSE |
| 257 | chr7 | 136935977 | 136936138 | 162 |
|
86.18204 | 13961.491 | 13939968 | 13940129 | 385 | 3745 | 2.4040123 | 0.6160494 | 0.4370370 | 0.0000000 | 8.5629630 | -4.952905e-01 | -1.000000e+100 | 3.796992e+00 | 0.0005902 | TRUE | 0.0462646 | TRUE | PTN | NM_002825 NP_002816 XM_005250515 XM_005250516 XP_005250572 XP_005250573 | inside exon | inside | 92408 | inside exon | 0 | 4 | 5 | inside transcription region |
|
116454 | 26953 | 0.51 | FALSE |
| 258 | chr7 | 83090259 | 83090482 | 224 |
|
62.18237 | 13928.851 | 8279763 | 8279986 | 218 | 5588 | 0.5520089 | 0.0000000 | 0.0000000 | 0.0000000 | 2.2080357 | NaN | NaN | 1.000000e+100 | 0.0005964 | TRUE | 0.0465666 | TRUE | SEMA3E | NM_001178129 NM_012431 NP_001171600 NP_036563 XM_006716187 XP_006716250 | inside intron | inside | 187997 | inside intron | -5316 | 4 | 17 | inside transcription region |
|
285257 | 280956 | 0.51 | FALSE |
| 259 | chr15 | 77907148 | 77907321 | 174 |
|
79.92182 | 13906.396 | 7909674 | 7909847 | 231 | 2856 | 0.6491379 | 0.0000000 | 0.0000000 | 0.0000000 | 2.5965517 | NaN | NaN | 1.000000e+100 | 0.0005998 | TRUE | 0.0466073 | TRUE | LINGO1 | NM_032808 NP_116197 XM_006720723 XP_006720786 | inside exon | inside | 81154 | inside exon | 0 | 4 | 4 | inside transcription region |
|
83106 | 1844 | 0.51 | FALSE |
| 260 | chr13 | 100616157 | 100616400 | 244 |
|
56.89263 | 13881.801 | 5448092 | 5448335 | 191 | 2995 | 0.5706967 | 0.0000000 | 0.0000000 | 0.0000000 | 2.2827869 | NaN | NaN | 1.000000e+100 | 0.0006035 | TRUE | 0.0466073 | TRUE | ZIC5 | NM_033132 NP_149123 | inside exon | inside | 7778 | inside exon | 0 | 2 | 2 | 3'UTR |
|
8903 | 6298 | 0.51 | FALSE |
| 261 | chr5 | 146773235 | 146773515 | 281 |
|
49.39740 | 13880.670 | 12807921 | 12808201 | 394 | 10875 | 1.6119217 | 0.8946619 | 0.3765125 | 0.2042705 | 4.9722420 | -1.248645e+00 | -2.130862e+00 | 2.474482e+00 | 0.0006038 | TRUE | 0.0466073 | TRUE | DPYSL3 | NM_001197294 NM_001387 NP_001184223 NP_001378 | inside exon | inside | 116104 | inside exon | 0 | 14 | 14 | 3'UTR |
|
119248 | 115823 | 0.51 | FALSE |
| 262 | chr5 | 115781504 | 115781860 | 357 |
|
38.64011 | 13794.520 | 9459227 | 9459583 | 285 | 3139 | 1.7344538 | 0.0100840 | 0.1854342 | 0.1210084 | 6.6212885 | 4.200762e+00 | 3.584963e+00 | 9.358895e+00 | 0.0006180 | TRUE | 0.0475012 | TRUE | SEMA6A | NM_020796 NP_065847 XM_005272041 XM_005272042 XM_006714663 XP_005272098 XP_005272099 XP_006714726 | inside exon | inside | 128691 | inside exon | 0 | 19 | 19 | 3'UTR |
|
131300 | 58331 | 0.51 | FALSE |
| 263 | chr17 | 42876603 | 42876832 | 230 |
|
59.86767 | 13769.564 | 8247212 | 8247441 | 204 | 7091 | 0.7058696 | 0.0000000 | 0.0000000 | 0.0000000 | 2.8234783 | NaN | NaN | 1.000000e+100 | 0.0006223 | TRUE | 0.0475012 | TRUE | GJC1 | NM_001080383 NM_005497 NP_001073852 NP_005488 XM_005256920 XM_005256921 XP_005256977 XP_005256978 | inside exon | inside | 31347 | inside exon | 0 | 3 | 3 | 3'UTR |
|
32363 | 1190 | 0.51 | FALSE |
| 264 | chr18 | 2847017 | 2847199 | 183 |
|
75.23921 | 13768.776 | 268805 | 268987 | 7 | 183 | 13.0281421 | 47.3650273 | 1.2699454 | 3.0732240 | 0.4043716 | -5.220984e+00 | -3.945997e+00 | -6.871997e+00 | 0.0006225 | TRUE | 0.0475012 | TRUE | EMILIN2 | NM_032048 NP_114437 | overlaps 5' | overlaps 5' | 0 | inside exon | 0 | 1 | 8 | overlaps 5' UTR |
|
67062 | 66215 | 0.51 | FALSE |
| 265 | chrX | 113705687 | 113705910 | 224 |
|
61.33788 | 13739.686 | 6942206 | 6942429 | 299 | 5443 | 1.0026786 | 0.0607143 | 0.0133929 | 0.0285714 | 3.9080357 | -2.180572e+00 | -1.087463e+00 | 6.008264e+00 | 0.0006274 | TRUE | 0.0476919 | TRUE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | upstream | upstream | 112641 | NA | NA | NA | 6 | NA |
|
326073 | 180632 | 0.51 | FALSE |
| 266 | chr7 | 121659184 | 121659322 | 139 |
|
98.75317 | 13726.691 | 12249031 | 12249169 | 331 | 145 | 0.7546763 | 0.0000000 | 0.0000000 | 0.0000000 | 3.0187050 | NaN | NaN | 1.000000e+100 | 0.0006301 | TRUE | 0.0477214 | TRUE | PTPRZ1 | NM_001206838 NM_001206839 NM_002851 NP_001193767 NP_001193768 NP_002842 XM_005250519 XM_006716076 XP_005250576 XP_006716139 | inside exon | inside | 146025 | inside exon | 0 | 13 | 30 | inside transcription region |
|
188931 | 187720 | 0.51 | FALSE |
| 267 | chr16 | 65266048 | 65266237 | 190 |
|
72.16268 | 13710.909 | 8196507 | 8196696 | 214 | 5478 | 0.6100000 | 0.0000000 | 0.0000000 | 0.0000000 | 2.4400000 | NaN | NaN | 1.000000e+100 | 0.0006327 | TRUE | 0.0477385 | TRUE | LINC00922 | NM_001101346 NR_027755 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.51 | FALSE |
| 268 | chr5 | 141692507 | 141692741 | 235 |
|
57.99894 | 13629.750 | 12325645 | 12325879 | 384 | 14439 | 0.6455319 | 0.0000000 | 0.0000000 | 0.0595745 | 2.5225532 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0006457 | TRUE | 0.0485358 | TRUE | SPRY4 | NM_001127496 NM_030964 NP_001120968 NP_112226 XM_005268518 XM_005268519 XM_006714798 XP_005268575 XP_005268576 XP_006714861 | inside exon | inside | 11879 | inside exon | 0 | 3 | 3 | 3'UTR |
|
14628 | 5556 | 0.51 | FALSE |
| 269 | chr2 | 77325596 | 77325801 | 206 |
|
66.01103 | 13598.272 | 8970769 | 8970974 | 213 | 11162 | 0.7592233 | 0.0000000 | 0.0000000 | 0.0000000 | 3.0368932 | NaN | NaN | 1.000000e+100 | 0.0006517 | TRUE | 0.0487089 | TRUE | LRRTM4 | NM_001134745 NM_001282924 NM_001282928 NM_024993 NP_001128217 NP_001269853 NP_001269857 NP_079269 | inside intron | inside | 423701 | inside intron | 349554 | 4 | 4 | inside transcription region |
|
774652 | 772976 | 0.51 | FALSE |
| 270 | chr21 | 44475285 | 44475414 | 130 |
|
104.54845 | 13591.298 | 2430269 | 2430398 | 56 | 13860 | 0.5288462 | 0.0000000 | 0.1230769 | 0.0000000 | 1.9923077 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0006528 | TRUE | 0.0487089 | TRUE | CBS | NM_000071 NM_001178008 NM_001178009 NP_000062 NP_001171479 NP_001171480 XM_006724057 XP_006724120 | inside intron | inside | 21058 | inside intron | 1192 | 17 | 18 | inside transcription region |
|
23171 | 18313 | 0.51 | FALSE |
| 271 | chr1 | 232272252 | 232272435 | 184 |
|
73.71276 | 13563.148 | 27624464 | 27624647 | 784 | 3355 | 0.5459239 | 0.0173913 | 0.0000000 | 0.0000000 | 2.1663043 | -1.000000e+100 | -1.000000e+100 | 6.960726e+00 | 0.0006569 | TRUE | 0.0488192 | TRUE | TSNAX-DISC1 | NR_028393 NR_028394 NR_028395 NR_028396 NR_028397 NR_028398 NR_028399 NR_028400 | NA | NA | 0 | NA | NA | NA | 16 | NA |
|
0 | 0 | 0.51 | FALSE |
| 272 | chr1 | 156641604 | 156641829 | 226 |
|
59.96115 | 13551.220 | 19870623 | 19870848 | 536 | 8487 | 0.9982301 | 0.2159292 | 0.0000000 | 0.0000000 | 3.7769912 | -1.000000e+100 | -1.000000e+100 | 4.128607e+00 | 0.0006592 | TRUE | 0.0488192 | TRUE | NES | NM_006617 NP_006608 | inside exon | inside | 5360 | inside exon | 0 | 4 | 4 | inside transcription region |
|
8633 | 7942 | 0.51 | FALSE |
| 273 | chr7 | 121693964 | 121694092 | 129 |
|
104.69905 | 13506.178 | 12250479 | 12250607 | 333 | 3660 | 1.2941860 | 0.0000000 | 0.0000000 | 0.0000000 | 5.1767442 | NaN | NaN | 1.000000e+100 | 0.0006647 | TRUE | 0.0490474 | TRUE | PTPRZ1 | NM_001206838 NM_001206839 NM_002851 NP_001193767 NP_001193768 NP_002842 XM_005250519 XM_006716076 XP_005250576 XP_006716139 | inside exon | inside | 180805 | inside exon | 0 | 26 | 30 | inside transcription region |
|
188931 | 187720 | 0.52 | FALSE |
| 274 | chr20 | 57415778 | 57415936 | 159 |
|
84.60402 | 13452.039 | 6588175 | 6588333 | 175 | 734 | 0.8745283 | 0.0000000 | 0.0000000 | 0.0000000 | 3.4981132 | NaN | NaN | 1.000000e+100 | 0.0006752 | TRUE | 0.0496436 | TRUE | GNAS | NM_000516 NM_001077488 NM_001077489 NM_001077490 NM_016592 NM_080425 NM_080426 NP_000507 NP_001070956 NP_001070957 NP_001070958 NP_057676 NP_536350 NP_536351 NR_003259 XM_005260401 XM_005260402 XM_006723781 XM_006723782 XP_005260458 XP_005260459 XP_006723844 XP_006723845 | inside exon | inside | 983 | inside exon | 0 | 1 | 13 | overlaps 3'UTR |
|
71455 | 737 | 0.52 | FALSE |
| 275 | chr12 | 8946903 | 8947094 | 192 |
|
69.96853 | 13433.958 | 1367082 | 1367273 | 52 | 8328 | 0.9208333 | 0.0000000 | 0.0000000 | 0.0000000 | 3.6833333 | NaN | NaN | 1.000000e+100 | 0.0006793 | TRUE | 0.0497602 | TRUE | RIMKLB | NM_020734 NP_065785 XM_006719116 XM_006719117 XM_006719118 XM_006719119 XM_006719120 XM_006719121 XM_006719122 XM_006719123 XM_006719124 XM_006719125 XM_006719126 XM_006719127 XM_006719128 XP_006719179 XP_006719180 XP_006719181 XP_006719182 XP_006719183 XP_006719184 XP_006719185 XP_006719186 XP_006719187 XP_006719188 XP_006719189 XP_006719190 XP_006719191 | NA | NA | 0 | NA | NA | NA | 9 | NA |
|
0 | 0 | 0.52 | FALSE |
| 276 | chr11 | 67393572 | 67393820 | 249 |
|
53.87062 | 13413.784 | 7449359 | 7449607 | 230 | 770 | 1.5281124 | 0.0947791 | 0.5429719 | 0.6032129 | 4.8714859 | 2.518236e+00 | 2.670026e+00 | 5.683649e+00 | 0.0006820 | TRUE | 0.0497812 | TRUE | NUDT8 | NM_001243750 NM_181843 NP_001230679 NP_862826 | downstream | downstream | 3588 | NA | NA | NA | 3 | NA |
|
1999 | 1606 | 0.52 | FALSE |
| 277 | chr19 | 54446502 | 54446666 | 165 |
|
80.96374 | 13359.017 | 11721726 | 11721890 | 396 | 1943 | 1.2087879 | 0.0000000 | 0.0000000 | 0.0000000 | 4.8351515 | NaN | NaN | 1.000000e+100 | 0.0006939 | TRUE | 0.0504626 | TRUE | CACNG7 | NM_031896 NP_114102 XM_005259124 XM_005259125 XP_005259181 XP_005259182 | inside exon | inside | 30511 | inside exon | 0 | 5 | 5 | 3'UTR |
|
30978 | 29461 | 0.52 | FALSE |
| 278 | chr12 | 86268093 | 86268254 | 162 |
|
81.84097 | 13258.237 | 9619324 | 9619485 | 270 | 4255 | 0.8382716 | 0.0382716 | 0.0864198 | 0.0000000 | 3.2283951 | 1.175087e+00 | -1.000000e+100 | 6.398399e+00 | 0.0007161 | TRUE | 0.0518915 | TRUE | NTS | NM_006183 NP_006174 | inside exon | inside | 20 | inside exon | 0 | 1 | 4 | overlaps 5' UTR |
|
8697 | 7971 | 0.52 | FALSE |
| 279 | chr7 | 121652529 | 121652701 | 173 |
|
75.87908 | 13127.080 | 12248238 | 12248410 | 330 | 3506 | 0.6904624 | 0.0000000 | 0.0000000 | 0.0000000 | 2.7618497 | NaN | NaN | 1.000000e+100 | 0.0007425 | TRUE | 0.0536147 | TRUE | PTPRZ1 | NM_001206838 NM_001206839 NM_002851 NP_001193767 NP_001193768 NP_002842 XM_005250519 XM_006716076 XP_005250576 XP_006716139 | inside intron | inside | 139370 | inside intron | -1166 | 12 | 30 | inside transcription region |
|
188931 | 187720 | 0.52 | FALSE |
| 280 | chr4 | 180090389 | 180090809 | 421 |
|
31.04512 | 13069.995 | 12309683 | 12310103 | 468 | 3689 | 0.4768409 | 0.0000000 | 0.0000000 | 0.0000000 | 1.9073634 | NaN | NaN | 1.000000e+100 | 0.0007552 | TRUE | 0.0543335 | TRUE | LINC01098 | NM_001085490 NR_028342 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.52 | FALSE |
| 281 | chr12 | 59717346 | 59717508 | 163 |
|
79.97842 | 13036.483 | 7619580 | 7619742 | 197 | 6694 | 1.9490798 | 0.0000000 | 0.0110429 | 0.0196319 | 7.7656442 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0007620 | TRUE | 0.0546286 | TRUE | SLC16A7 | NM_001270622 NM_001270623 NM_004731 NP_001257551 NP_001257552 NP_004722 NR_073055 NR_073056 XM_005269231 XM_006719693 XP_005269288 XP_006719756 | upstream | upstream | 272313 | NA | NA | NA | 6 | NA |
|
193814 | 74877 | 0.52 | FALSE |
| 282 | chr18 | 6948402 | 6948555 | 154 |
|
84.40969 | 12999.092 | 515360 | 515513 | 17 | 3800 | 0.8188312 | 0.0000000 | 0.0000000 | 0.0000000 | 3.2753247 | NaN | NaN | 1.000000e+100 | 0.0007700 | TRUE | 0.0550027 | TRUE | LAMA1 | NM_005559 NP_005550 | inside exon | inside | 169258 | inside exon | 0 | 59 | 62 | inside transcription region |
|
176070 | 95663 | 0.52 | FALSE |
| 283 | chr13 | 56154834 | 56155008 | 175 |
|
73.84728 | 12923.274 | 3926105 | 3926279 | 121 | 13379 | 1.0980000 | 0.0000000 | 0.0000000 | 0.0000000 | 4.3920000 | NaN | NaN | 1.000000e+100 | 0.0007865 | TRUE | 0.0559862 | TRUE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.52 | FALSE |
| 284 | chr13 | 51748705 | 51748920 | 216 |
|
59.62432 | 12878.853 | 3598442 | 3598657 | 92 | 10662 | 10.1291667 | 0.0787037 | 0.5648148 | 0.7305556 | 39.1425926 | 2.843275e+00 | 3.214491e+00 | 8.958092e+00 | 0.0007969 | TRUE | 0.0563386 | TRUE | LINC00371 | NR_102431 NR_102432 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.53 | FALSE |
| 285 | chr12 | 66359712 | 66359973 | 262 |
|
49.14917 | 12877.081 | 8152394 | 8152655 | 215 | 2964 | 1.0416031 | 0.0000000 | 0.0000000 | 0.2931298 | 3.8732824 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0007970 | TRUE | 0.0563386 | TRUE | HMGA2 | NM_001015886 NM_003483 NM_003484 NP_003474 NP_003475 XM_005269164 XM_006719620 XP_005269221 XP_006719683 XR_245958 | inside exon | inside | 141472 | inside exon | 0 | 5 | 5 | 3'UTR |
|
141831 | 138021 | 0.53 | FALSE |
| 286 | chr2 | 17773337 | 17773503 | 167 |
|
76.94006 | 12848.989 | 1048534 | 1048700 | 41 | 167 | 0.7565868 | 0.0000000 | 0.0000000 | 0.0000000 | 3.0263473 | NaN | NaN | 1.000000e+100 | 0.0008042 | TRUE | 0.0566443 | TRUE | VSNL1 | NM_003385 NP_003376 | inside exon | inside | 51530 | inside exon | 0 | 2 | 4 | overlaps 5' UTR |
|
115899 | 63319 | 0.53 | FALSE |
| 287 | chr12 | 14859136 | 14859397 | 262 |
|
48.54584 | 12719.009 | 2666269 | 2666530 | 70 | 3841 | 1.0646947 | 0.0000000 | 0.1595420 | 0.1541985 | 3.9450382 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0008371 | TRUE | 0.0587584 | TRUE | GUCY2C | NM_004963 NP_004954 | upstream | upstream | 9617 | NA | NA | NA | 27 | NA |
|
83951 | 83331 | 0.53 | FALSE |
| 288 | chr4 | 189012451 | 189012600 | 150 |
|
84.61877 | 12692.815 | 12667880 | 12668029 | 498 | 639 | 0.5713333 | 0.0000000 | 0.0000000 | 0.0000000 | 2.2853333 | NaN | NaN | 1.000000e+100 | 0.0008444 | TRUE | 0.0590649 | TRUE | TRIML2 | NM_173553 NP_775824 XM_006714136 XP_006714199 | inside exon | inside | 14144 | inside exon | 0 | 8 | 8 | overlaps 3'UTR |
|
14317 | 13995 | 0.53 | FALSE |
| 289 | chr13 | 43441277 | 43441413 | 137 |
|
92.53736 | 12677.619 | 2381221 | 2381357 | 57 | 13438 | 0.7704380 | 0.0000000 | 0.0000000 | 0.0000000 | 3.0817518 | NaN | NaN | 1.000000e+100 | 0.0008480 | TRUE | 0.0591093 | TRUE | EPSTI1 | NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959 | downstream | downstream | 124994 | NA | NA | NA | 13 | NA |
|
105883 | 103915 | 0.53 | FALSE |
| 290 | chr13 | 53313765 | 53313952 | 188 |
|
67.18674 | 12631.108 | 3909431 | 3909618 | 108 | 787 | 0.7973404 | 0.0000000 | 0.0000000 | 0.0000000 | 3.1893617 | NaN | NaN | 1.000000e+100 | 0.0008601 | TRUE | 0.0597506 | TRUE | LECT1 | NM_001011705 NM_007015 NP_001011705 NP_008946 XM_006719760 XM_006719761 XP_006719823 XP_006719824 | overlaps 5' | overlaps 5' | 0 | inside exon | 0 | 1 | 6 | overlaps 5' UTR |
|
36547 | 36187 | 0.53 | FALSE |
| 291 | chr13 | 51748306 | 51748477 | 172 |
|
73.15402 | 12582.492 | 3598043 | 3598214 | 92 | 10662 | 5.5014535 | 0.1941860 | 0.0000000 | 0.0000000 | 21.8116279 | -1.000000e+100 | -1.000000e+100 | 6.811514e+00 | 0.0008723 | TRUE | 0.0599786 | TRUE | LINC00371 | NR_102431 NR_102432 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.53 | FALSE |
| 292 | chr1 | 156043299 | 156043390 | 92 |
|
136.61987 | 12569.028 | 19697588 | 19697679 | 529 | 5488 | 0.7407609 | 0.0000000 | 0.1956522 | 0.0000000 | 2.7673913 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0008756 | TRUE | 0.0599786 | TRUE | MEX3A | NM_001093725 NP_001087194 | inside exon | inside | 8399 | inside exon | 0 | 2 | 2 | 3'UTR |
|
9985 | 5424 | 0.53 | FALSE |
| 293 | chr13 | 43439099 | 43439345 | 247 |
|
50.88533 | 12568.675 | 2379368 | 2379614 | 57 | 13438 | 0.6722672 | 0.0000000 | 0.1894737 | 0.0000000 | 2.4995951 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0008759 | TRUE | 0.0599786 | TRUE | EPSTI1 | NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959 | downstream | downstream | 127062 | NA | NA | NA | 13 | NA |
|
105883 | 103915 | 0.53 | FALSE |
| 294 | chrX | 113704580 | 113704803 | 224 |
|
56.10468 | 12567.448 | 6941381 | 6941604 | 299 | 5443 | 1.6988839 | 0.1821429 | 0.0660714 | 0.6616071 | 5.8857143 | -1.462972e+00 | 1.860904e+00 | 5.014075e+00 | 0.0008765 | TRUE | 0.0599786 | TRUE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | upstream | upstream | 113748 | NA | NA | NA | 6 | NA |
|
326073 | 180632 | 0.53 | FALSE |
| 295 | chr7 | 121678809 | 121678943 | 135 |
|
93.04038 | 12560.451 | 12249609 | 12249743 | 332 | 16420 | 0.7018519 | 0.0000000 | 0.0000000 | 0.0000000 | 2.8074074 | NaN | NaN | 1.000000e+100 | 0.0008783 | TRUE | 0.0599786 | TRUE | PTPRZ1 | NM_001206838 NM_001206839 NM_002851 NP_001193767 NP_001193768 NP_002842 XM_005250519 XM_006716076 XP_005250576 XP_006716139 | inside exon | inside | 165650 | inside exon | 0 | 19 | 30 | inside transcription region |
|
188931 | 187720 | 0.53 | FALSE |
| 296 | chr9 | 133995622 | 133995908 | 287 |
|
43.70841 | 12544.314 | 11058938 | 11059224 | 391 | 5341 | 0.9729965 | 0.0571429 | 0.2850174 | 0.2738676 | 3.2759582 | 2.318405e+00 | 2.260833e+00 | 5.841200e+00 | 0.0008824 | TRUE | 0.0600519 | TRUE | AIF1L | NM_001002260 NM_001185095 NM_001185096 NM_031426 NP_001172024 NP_001172025 NP_113614 NR_033701 | inside exon | inside | 17432 | inside exon | 0 | 5 | 5 | overlaps 3'UTR |
|
20349 | 17441 | 0.53 | FALSE |
| 297 | chr1 | 229313094 | 229313237 | 144 |
|
86.83781 | 12504.644 | 27202907 | 27203050 | 774 | 5305 | 1.5163194 | 0.1402778 | 0.5625000 | 0.0833333 | 5.2791667 | 2.003567e+00 | -7.513209e-01 | 5.233952e+00 | 0.0008911 | TRUE | 0.0604439 | TRUE | RAB4A | NM_001271998 NM_004578 NP_001258927 NP_004569 NR_073545 | upstream | upstream | 93572 | NA | NA | NA | 8 | NA |
|
34831 | 31637 | 0.53 | FALSE |
| 298 | chr13 | 47407393 | 47407432 | 40 |
|
311.97601 | 12479.040 | 2833102 | 2833141 | 68 | 85 | 0.4700000 | 0.0000000 | 0.0000000 | 0.0000000 | 1.8800000 | NaN | NaN | 1.000000e+100 | 0.0008976 | TRUE | 0.0606797 | TRUE | HTR2A | NM_000621 NM_001165947 NP_000612 NP_001159419 | inside exon | inside | 63779 | inside exon | 0 | 4 | 4 | 3'UTR |
|
65534 | 61069 | 0.53 | FALSE |
| 299 | chr6 | 3227721 | 3227876 | 156 |
|
79.67205 | 12428.840 | 465942 | 466097 | 12 | 3330 | 5.6817308 | 0.0000000 | 0.0000000 | 0.0000000 | 22.7269231 | NaN | NaN | 1.000000e+100 | 0.0009108 | TRUE | 0.0613620 | TRUE | TUBB2B | NM_178012 NP_821080 | inside exon | inside | 92 | inside exon | 0 | 1 | 4 | overlaps 5' UTR |
|
3473 | 2792 | 0.53 | FALSE |
| 300 | chr12 | 86276001 | 86276213 | 213 |
|
58.04080 | 12362.691 | 9619773 | 9619985 | 271 | 239 | 0.8685446 | 0.0000000 | 0.0000000 | 0.0000000 | 3.4741784 | NaN | NaN | 1.000000e+100 | 0.0009299 | TRUE | 0.0622679 | TRUE | NTS | NM_006183 NP_006174 | inside exon | inside | 7928 | inside exon | 0 | 4 | 4 | overlaps 3'UTR |
|
8697 | 7971 | 0.53 | FALSE |
| 301 | chr20 | 31375036 | 31375257 | 222 |
|
55.67403 | 12359.635 | 2805961 | 2806182 | 85 | 24597 | 2.8112613 | 1.1279279 | 1.4270270 | 0.5702703 | 8.1198198 | 3.393378e-01 | -9.839572e-01 | 2.847773e+00 | 0.0009304 | TRUE | 0.0622679 | TRUE | DNMT3B | NM_001207055 NM_001207056 NM_006892 NM_175848 NM_175849 NM_175850 NP_001193984 NP_001193985 NP_008823 NP_787044 NP_787045 NP_787046 | inside exon | inside | 7378 | inside exon | 0 | 6 | 22 | inside transcription region |
|
29504 | 27787 | 0.53 | FALSE |
| 302 | chr9 | 133996141 | 133996443 | 303 |
|
40.62145 | 12308.298 | 11059455 | 11059757 | 391 | 5341 | 0.9429043 | 0.1689769 | 0.0000000 | 0.0000000 | 3.6026403 | -1.000000e+100 | -1.000000e+100 | 4.414157e+00 | 0.0009448 | TRUE | 0.0630248 | TRUE | AIF1L | NM_001002260 NM_001185095 NM_001185096 NM_031426 NP_001172024 NP_001172025 NP_113614 NR_033701 | inside exon | inside | 17951 | inside exon | 0 | 5 | 5 | 3'UTR |
|
20349 | 17441 | 0.53 | FALSE |
| 303 | chr12 | 53292463 | 53292683 | 221 |
|
55.59369 | 12286.206 | 6337351 | 6337571 | 154 | 7844 | 4.1730769 | 1.3312217 | 1.0687783 | 0.5221719 | 13.7701357 | -3.167883e-01 | -1.350154e+00 | 3.370720e+00 | 0.0009499 | TRUE | 0.0630724 | TRUE | KRT8 | NM_001256282 NM_001256293 NM_002273 NP_001243211 NP_001243222 NP_002264 NR_045962 | inside exon | inside | 50967 | inside exon | 0 | 7 | 9 | inside transcription region |
|
52679 | 7553 | 0.53 | FALSE |
| 304 | chr5 | 146772928 | 146773166 | 239 |
|
51.36963 | 12277.341 | 12807614 | 12807852 | 394 | 10875 | 2.1290795 | 0.6928870 | 0.0000000 | 0.0000000 | 7.8234310 | -1.000000e+100 | -1.000000e+100 | 3.497109e+00 | 0.0009518 | TRUE | 0.0630724 | TRUE | DPYSL3 | NM_001197294 NM_001387 NP_001184223 NP_001378 | inside exon | inside | 116453 | inside exon | 0 | 14 | 14 | 3'UTR |
|
119248 | 115823 | 0.53 | FALSE |
| 305 | chr3 | 46620722 | 46620856 | 135 |
|
90.79084 | 12256.763 | 5013611 | 5013745 | 116 | 4837 | 1.3688889 | 0.0000000 | 0.0000000 | 0.0000000 | 5.4755556 | NaN | NaN | 1.000000e+100 | 0.0009596 | TRUE | 0.0633799 | TRUE | LRRC2 | NM_024512 NM_024750 NP_078788 XM_006713332 XP_006713395 | inside intron | inside | 716 | inside intron | -571 | 1 | 9 | 5' UTR |
|
64694 | 32577 | 0.53 | FALSE |
| 306 | chr15 | 43991172 | 43991384 | 213 |
|
57.39620 | 12225.391 | 2727870 | 2728082 | 83 | 5230 | 1.9591549 | 0.2957746 | 0.1464789 | 0.3286385 | 7.0657277 | -1.013806e+00 | 1.520031e-01 | 4.578268e+00 | 0.0009690 | TRUE | 0.0635843 | TRUE | CKMT1A | NM_001015001 NP_001015001 XM_005254498 XP_005254555 | inside exon | inside | 6088 | inside exon | 0 | 10 | 10 | overlaps 3'UTR |
|
6336 | 5038 | 0.53 | FALSE |
| 307 | chr2 | 202898668 | 202898867 | 200 |
|
61.12662 | 12225.324 | 19693710 | 19693909 | 532 | 4463 | 0.7702500 | 0.4080000 | 0.0000000 | 0.2020000 | 2.4710000 | -1.000000e+100 | -1.014214e+00 | 2.598454e+00 | 0.0009690 | TRUE | 0.0635843 | TRUE | FZD7 | NM_003507 NP_003498 | promoter | promoter | 443 | NA | NA | NA | 1 | NA |
|
3850 | 1724 | 0.53 | FALSE |
| 308 | chr1 | 82457605 | 82457805 | 201 |
|
60.67160 | 12194.992 | 11406029 | 11406229 | 322 | 1848 | 0.4477612 | 0.0000000 | 0.0000000 | 0.0000000 | 1.7910448 | NaN | NaN | 1.000000e+100 | 0.0009779 | TRUE | 0.0639614 | TRUE | LPHN2 | NM_012302 NP_036434 XM_005270666 XM_005270667 XM_005270668 XM_005270670 XM_005270673 XM_005270674 XM_006710485 XM_006710486 XM_006710487 XM_006710488 XM_006710489 XM_006710490 XM_006710491 XM_006710492 XM_006710493 XM_006710494 XM_006710495 XM_006710496 XM_006710497 XP_005270723 XP_005270724 XP_005270725 XP_005270727 XP_005270730 XP_005270731 XP_006710548 XP_006710549 XP_006710550 XP_006710551 XP_006710552 XP_006710553 XP_006710554 XP_006710555 XP_006710556 XP_006710557 XP_006710558 XP_006710559 XP_006710560 | inside exon | inside | 41732 | inside exon | 0 | 17 | 17 | 3'UTR |
|
42234 | 40867 | 0.53 | FALSE |
| 309 | chr11 | 3431771 | 3432069 | 299 |
|
40.68563 | 12165.004 | 719880 | 720178 | 13 | 10349 | 0.8443144 | 0.0000000 | 0.0000000 | 0.0000000 | 3.3772575 | NaN | NaN | 1.000000e+100 | 0.0009864 | TRUE | 0.0640359 | TRUE | LOC650368 | NR_024248 | NA | NA | 0 | NA | NA | NA | 9 | NA |
|
0 | 0 | 0.53 | FALSE |
| 310 | chr5 | 120035002 | 120035145 | 144 |
|
84.42559 | 12157.285 | 9720549 | 9720692 | 300 | 4047 | 1.0361111 | 0.0000000 | 0.0000000 | 0.0000000 | 4.1444444 | NaN | NaN | 1.000000e+100 | 0.0009889 | TRUE | 0.0640359 | TRUE | PRR16 | NM_016644 NP_057728 XM_005272010 XM_005272011 XM_005272012 XP_005272067 XP_005272068 XP_005272069 | downstream | downstream | 234983 | NA | NA | NA | 3 | NA |
|
222945 | 205505 | 0.53 | FALSE |
| 311 | chr13 | 43445854 | 43446020 | 167 |
|
72.73330 | 12146.461 | 2384811 | 2384977 | 57 | 13438 | 0.7407186 | 0.0000000 | 0.0000000 | 0.0000000 | 2.9628743 | NaN | NaN | 1.000000e+100 | 0.0009920 | TRUE | 0.0640359 | TRUE | EPSTI1 | NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959 | downstream | downstream | 120387 | NA | NA | NA | 13 | NA |
|
105883 | 103915 | 0.53 | FALSE |
| 312 | chr5 | 25432487 | 25432739 | 253 |
|
48.00623 | 12145.576 | 1096404 | 1096656 | 57 | 15439 | 0.3626482 | 0.0000000 | 0.0000000 | 0.0000000 | 1.4505929 | NaN | NaN | 1.000000e+100 | 0.0009924 | TRUE | 0.0640359 | TRUE | RP11-730N24.1 | NR_037896 | NA | NA | 0 | NA | NA | NA | 3 | NA |
|
0 | 0 | 0.53 | FALSE |
| 313 | chr1 | 223197782 | 223197919 | 138 |
|
87.95062 | 12137.185 | 26366505 | 26366642 | 754 | 8216 | 4.5677536 | 0.0000000 | 0.0000000 | 0.0000000 | 18.2710145 | NaN | NaN | 1.000000e+100 | 0.0009949 | TRUE | 0.0640359 | TRUE | DISP1 | NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658 | downstream | downstream | 209351 | NA | NA | NA | 10 | NA |
|
190906 | 63148 | 0.53 | FALSE |
| 314 | chr1 | 223202909 | 223203124 | 216 |
|
56.02248 | 12100.856 | 26370672 | 26370887 | 754 | 8216 | 0.6960648 | 0.0000000 | 0.1777778 | 0.0000000 | 2.6064815 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0010052 | TRUE | 0.0644876 | TRUE | DISP1 | NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658 | downstream | downstream | 214478 | NA | NA | NA | 10 | NA |
|
190906 | 63148 | 0.53 | FALSE |
| 315 | chr2 | 241700646 | 241700780 | 135 |
|
89.34649 | 12061.777 | 23645970 | 23646104 | 637 | 15221 | 0.7051852 | 0.0000000 | 0.0000000 | 0.0000000 | 2.8207407 | NaN | NaN | 1.000000e+100 | 0.0010154 | TRUE | 0.0649365 | TRUE | KIF1A | NM_001244008 NM_004321 NP_001230937 NP_004312 XM_005247022 XM_005247023 XM_005247024 XM_005247026 XM_005247027 XM_005247028 XM_006712601 XM_006712602 XM_006712603 XM_006712604 XM_006712605 XP_005247079 XP_005247080 XP_005247081 XP_005247083 XP_005247084 XP_005247085 XP_006712664 XP_006712665 XP_006712666 XP_006712667 XP_006712668 | inside exon | inside | 58945 | inside exon | 0 | 24 | 43 | inside transcription region |
|
96895 | 74339 | 0.53 | FALSE |
| 316 | chr5 | 146775122 | 146775284 | 163 |
|
73.46985 | 11975.586 | 12808373 | 12808535 | 394 | 10875 | 1.1914110 | 0.3116564 | 0.1668712 | 0.0969325 | 4.1901840 | -9.012218e-01 | -1.684904e+00 | 3.748985e+00 | 0.0010435 | TRUE | 0.0663012 | TRUE | DPYSL3 | NM_001197294 NM_001387 NP_001184223 NP_001378 | inside exon | inside | 114335 | inside exon | 0 | 13 | 14 | inside transcription region |
|
119248 | 115823 | 0.54 | FALSE |
| 317 | chr15 | 65621728 | 65621935 | 208 |
|
57.56005 | 11972.490 | 5964972 | 5965179 | 184 | 8664 | 0.8081731 | 0.0375000 | 0.0000000 | 0.0000000 | 3.1951923 | -1.000000e+100 | -1.000000e+100 | 6.412868e+00 | 0.0010446 | TRUE | 0.0663012 | TRUE | IGDCC3 | NM_004884 NP_004875 | inside exon | inside | 26775 | inside exon | 0 | 12 | 12 | inside transcription region |
|
26982 | 6564 | 0.54 | FALSE |
| 318 | chr3 | 65339308 | 65339488 | 181 |
|
65.99150 | 11944.462 | 7961601 | 7961781 | 214 | 3821 | 0.6635359 | 0.0000000 | 0.1116022 | 0.0000000 | 2.5425414 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0010514 | TRUE | 0.0663012 | TRUE | MAGI1 | NM_001033057 NM_004742 NM_015520 NP_001028229 NP_004733 NP_056335 XM_005265563 XM_005265564 XM_005265565 XM_005265566 XM_005265568 XM_005265570 XM_005265571 XM_005265574 XM_006713407 XM_006713408 XM_006713409 XM_006713410 XM_006713411 XM_006713412 XM_006713413 XM_006713414 XP_005265620 XP_005265621 XP_005265622 XP_005265623 XP_005265625 XP_005265627 XP_005265628 XP_005265631 XP_006713470 XP_006713471 XP_006713472 XP_006713473 XP_006713474 XP_006713475 XP_006713476 XP_006713477 | downstream | downstream | 685021 | NA | NA | NA | 25 | NA |
|
684603 | 681232 | 0.54 | FALSE |
| 319 | chr5 | 141690887 | 141691067 | 181 |
|
65.95700 | 11938.217 | 12324462 | 12324642 | 384 | 14439 | 0.5596685 | 0.0000000 | 0.0000000 | 0.1381215 | 2.1005525 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0010532 | TRUE | 0.0663012 | TRUE | SPRY4 | NM_001127496 NM_030964 NP_001120968 NP_112226 XM_005268518 XM_005268519 XM_006714798 XP_005268575 XP_005268576 XP_006714861 | inside exon | inside | 13553 | inside exon | 0 | 3 | 3 | 3'UTR |
|
14628 | 5556 | 0.54 | FALSE |
| 320 | chr7 | 121680870 | 121681031 | 162 |
|
73.69138 | 11938.004 | 12249879 | 12250040 | 332 | 16420 | 0.6055556 | 0.0000000 | 0.0000000 | 0.0000000 | 2.4222222 | NaN | NaN | 1.000000e+100 | 0.0010532 | TRUE | 0.0663012 | TRUE | PTPRZ1 | NM_001206838 NM_001206839 NM_002851 NP_001193767 NP_001193768 NP_002842 XM_005250519 XM_006716076 XP_005250576 XP_006716139 | inside exon | inside | 167711 | inside exon | 0 | 21 | 30 | inside transcription region |
|
188931 | 187720 | 0.54 | FALSE |
| 321 | chr9 | 133995938 | 133996104 | 167 |
|
71.39268 | 11922.577 | 11059254 | 11059420 | 391 | 5341 | 1.5502994 | 0.0000000 | 0.3580838 | 0.0646707 | 5.7784431 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0010582 | TRUE | 0.0664103 | TRUE | AIF1L | NM_001002260 NM_001185095 NM_001185096 NM_031426 NP_001172024 NP_001172025 NP_113614 NR_033701 | inside exon | inside | 17748 | inside exon | 0 | 5 | 5 | 3'UTR |
|
20349 | 17441 | 0.54 | FALSE |
| 322 | chrX | 110790978 | 110791163 | 186 |
|
63.96994 | 11898.408 | 6862622 | 6862807 | 294 | 1078 | 2.5661290 | 0.8333333 | 0.6698925 | 0.5752688 | 8.1860215 | -3.149641e-01 | -5.346574e-01 | 3.296197e+00 | 0.0010634 | TRUE | 0.0665288 | TRUE | LINC00890 | NR_033974 | NA | NA | 0 | NA | NA | NA | 3 | NA |
|
0 | 0 | 0.54 | FALSE |
| 323 | chr16 | 78013754 | 78013989 | 236 |
|
50.21285 | 11850.232 | 10470155 | 10470390 | 272 | 2496 | 0.6701271 | 0.0000000 | 0.1381356 | 0.0000000 | 2.5423729 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0010777 | TRUE | 0.0668706 | TRUE | VAT1L | NM_020927 NP_065978 | inside exon | inside | 191271 | inside exon | 0 | 9 | 9 | 3'UTR |
|
191518 | 189012 | 0.54 | FALSE |
| 324 | chr16 | 3142137 | 3142352 | 216 |
|
54.74980 | 11825.957 | 1055654 | 1055869 | 35 | 10352 | 1.1351852 | 0.0046296 | 0.0000000 | 0.1870370 | 4.3490741 | -1.000000e+100 | 5.336283e+00 | 9.875596e+00 | 0.0010847 | TRUE | 0.0668706 | TRUE | ZSCAN10 | NM_001282415 NM_001282416 NM_032805 NP_001269344 NP_001269345 NP_116194 | overlaps exon upstream | inside | 6941 | overlaps exon upstream | 0 | 2 | 5 | 5' UTR |
|
10398 | 1160 | 0.54 | FALSE |
| 325 | chr6 | 3226393 | 3226503 | 111 |
|
106.51895 | 11823.604 | 465722 | 465832 | 12 | 3330 | 5.5680180 | 0.0036036 | 0.0018018 | 0.0000000 | 22.2666667 | -1.000000e+00 | -1.000000e+100 | 1.259316e+01 | 0.0010853 | TRUE | 0.0668706 | TRUE | TUBB2B | NM_178012 NP_821080 | inside exon | inside | 1465 | inside exon | 0 | 3 | 4 | inside transcription region |
|
3473 | 2792 | 0.54 | FALSE |
| 326 | chr4 | 41259626 | 41259754 | 129 |
|
91.65489 | 11823.481 | 3752998 | 3753126 | 117 | 11482 | 4.6410853 | 1.3550388 | 0.2155039 | 0.1162791 | 16.8775194 | -2.652548e+00 | -3.542671e+00 | 3.638697e+00 | 0.0010853 | TRUE | 0.0668706 | TRUE | UCHL1 | NM_004181 NP_004172 | inside exon | inside | 728 | inside exon | 0 | 2 | 8 | 5' UTR |
|
11548 | 7357 | 0.54 | FALSE |
| 327 | chr2 | 27172426 | 27172660 | 235 |
|
50.31005 | 11822.862 | 2271565 | 2271799 | 64 | 5028 | 0.6310638 | 0.0621277 | 0.0000000 | 0.0000000 | 2.4621277 | -1.000000e+100 | -1.000000e+100 | 5.308526e+00 | 0.0010855 | TRUE | 0.0668706 | TRUE | DPYSL5 | NM_001253723 NM_001253724 NM_020134 NP_001240652 NP_001240653 NP_064519 | inside exon | inside | 101134 | inside exon | 0 | 13 | 13 | 3'UTR |
|
101927 | 48495 | 0.54 | FALSE |
| 328 | chr4 | 62616011 | 62616318 | 308 |
|
38.32626 | 11804.490 | 4881892 | 4882199 | 152 | 3983 | 1.0715909 | 0.0000000 | 0.0000000 | 0.0000000 | 4.2863636 | NaN | NaN | 1.000000e+100 | 0.0010916 | TRUE | 0.0670454 | TRUE | LPHN3 | NM_015236 NP_056051 XM_006714153 XM_006714154 XM_006714155 XM_006714156 XP_006714216 XP_006714217 XP_006714218 XP_006714219 | inside intron | inside | 17539 | inside intron | -16739 | 1 | 6 | inside transcription region |
|
202269 | 202149 | 0.54 | FALSE |
| 329 | chr14 | 41989592 | 41989727 | 136 |
|
86.16566 | 11718.530 | 2092692 | 2092827 | 94 | 1895 | 1.0948529 | 0.0000000 | 0.0000000 | 0.0000000 | 4.3794118 | NaN | NaN | 1.000000e+100 | 0.0011190 | TRUE | 0.0685202 | TRUE | LRFN5 | NM_152447 NP_689660 XM_005267369 XP_005267426 XR_429293 | upstream | upstream | 87037 | NA | NA | NA | 6 | NA |
|
296988 | 17549 | 0.55 | FALSE |
| 330 | chr16 | 49669905 | 49670038 | 134 |
|
87.20490 | 11685.457 | 7114628 | 7114761 | 168 | 2767 | 0.7563433 | 0.0000000 | 0.0000000 | 0.0000000 | 3.0253731 | NaN | NaN | 1.000000e+100 | 0.0011301 | TRUE | 0.0689859 | TRUE | ZNF423 | NM_001271620 NM_015069 NP_001258549 NP_055884 XM_005255855 XM_005255856 XM_005255857 XM_006721171 XP_005255912 XP_005255913 XP_005255914 XP_006721234 | inside exon | inside | 221792 | inside exon | 0 | 4 | 8 | inside transcription region |
|
367315 | 239592 | 0.55 | FALSE |
| 331 | chr14 | 57267782 | 57267913 | 132 |
|
88.38140 | 11666.345 | 3575608 | 3575739 | 149 | 4503 | 0.6284091 | 0.0000000 | 0.0000000 | 0.0000000 | 2.5136364 | NaN | NaN | 1.000000e+100 | 0.0011359 | TRUE | 0.0691329 | TRUE | OTX2 | NM_001270523 NM_001270524 NM_001270525 NM_021728 NM_172337 NP_001257452 NP_001257453 NP_001257454 NP_068374 NP_758840 NR_073034 NR_073036 | inside exon | inside | 9281 | inside exon | 0 | 4 | 4 | 3'UTR |
|
9769 | 359 | 0.55 | FALSE |
| 332 | chr22 | 44344664 | 44344764 | 101 |
|
115.16093 | 11631.254 | 5572908 | 5573008 | 142 | 6566 | 0.6579208 | 0.1465347 | 0.0000000 | 0.0000000 | 2.4851485 | -1.000000e+100 | -1.000000e+100 | 4.084018e+00 | 0.0011489 | TRUE | 0.0697121 | TRUE | PNPLA3 | NM_025225 NP_079501 | NA | NA | 0 | NA | NA | NA | 10 | NA |
|
0 | 0 | 0.55 | FALSE |
| 333 | chr11 | 27655936 | 27656103 | 168 |
|
69.09647 | 11608.207 | 2973543 | 2973710 | 80 | 13488 | 0.7529762 | 0.1500000 | 0.0000000 | 0.0000000 | 2.8619048 | -1.000000e+100 | -1.000000e+100 | 4.253941e+00 | 0.0011581 | TRUE | 0.0697672 | TRUE | BDNF-AS | NR_002832 NR_033312 NR_033313 NR_033314 NR_033315 | NA | NA | 0 | NA | NA | NA | 7 | NA |
|
0 | 0 | 0.56 | FALSE |
| 334 | chr16 | 51173206 | 51173326 | 121 |
|
95.85863 | 11598.895 | 7328382 | 7328502 | 178 | 4772 | 0.5727273 | 0.0000000 | 0.0000000 | 0.0000000 | 2.2909091 | NaN | NaN | 1.000000e+100 | 0.0011602 | TRUE | 0.0697672 | TRUE | SALL1 | NM_001127892 NM_002968 NP_001121364 NP_002959 XM_006721241 XP_006721304 | inside exon | inside | 11857 | inside exon | 0 | 2 | 3 | inside transcription region |
|
14160 | 4818 | 0.56 | FALSE |
| 335 | chr20 | 38902578 | 38902843 | 266 |
|
43.57949 | 11592.145 | 4403806 | 4404071 | 116 | 5560 | 3.4093985 | 0.0218045 | 0.3729323 | 0.0000000 | 13.2428571 | 4.096215e+00 | -1.000000e+100 | 9.246372e+00 | 0.0011622 | TRUE | 0.0697672 | TRUE | MAFB | NM_005461 NP_005452 | downstream | downstream | 415033 | NA | NA | NA | 1 | NA |
|
3359 | 971 | 0.56 | FALSE |
| 336 | chr6 | 105529996 | 105530269 | 274 |
|
42.28617 | 11586.411 | 9856997 | 9857270 | 278 | 4151 | 0.6666058 | 0.0000000 | 0.0000000 | 0.0000000 | 2.6664234 | NaN | NaN | 1.000000e+100 | 0.0011637 | TRUE | 0.0697672 | TRUE | LIN28B | NM_001004317 NP_001004317 XM_006715477 XP_006715540 | inside exon | inside | 124022 | inside exon | 0 | 4 | 4 | 3'UTR |
|
125233 | 99901 | 0.56 | FALSE |
| 337 | chr15 | 55905633 | 55905785 | 153 |
|
75.53545 | 11556.924 | 4218238 | 4218390 | 141 | 5154 | 0.6356209 | 0.0000000 | 0.0000000 | 0.1071895 | 2.4352941 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0011734 | TRUE | 0.0701420 | TRUE | PRTG | NM_173814 NP_776175 XM_005254310 XM_005254311 XM_006720473 XP_005254367 XP_005254368 XP_006720536 XR_429451 | inside exon | inside | 129392 | inside exon | 0 | 20 | 20 | 3'UTR |
|
131438 | 122919 | 0.57 | FALSE |
| 338 | chr12 | 97957748 | 97957905 | 158 |
|
73.08192 | 11546.943 | 10660195 | 10660352 | 300 | 1005 | 0.7142405 | 0.0886076 | 0.0000000 | 0.0000000 | 2.7683544 | -1.000000e+100 | -1.000000e+100 | 4.965454e+00 | 0.0011774 | TRUE | 0.0701762 | TRUE | RMST | NR_024037 | NA | NA | 0 | NA | NA | NA | 7 | NA |
|
0 | 0 | 0.57 | FALSE |
| 339 | chr21 | 44480539 | 44480656 | 118 |
|
97.69163 | 11527.612 | 2431197 | 2431314 | 56 | 13860 | 1.4830508 | 0.3152542 | 0.2338983 | 0.0000000 | 5.3830508 | -4.306344e-01 | -1.000000e+100 | 4.093836e+00 | 0.0011838 | TRUE | 0.0703451 | TRUE | CBS | NM_000071 NM_001178008 NM_001178009 NP_000062 NP_001171479 NP_001171480 XM_006724057 XP_006724120 | overlaps exon downstream | inside | 15816 | overlaps exon downstream | 0 | 12 | 18 | inside transcription region |
|
23171 | 18313 | 0.57 | FALSE |
| 340 | chr16 | 78013578 | 78013739 | 162 |
|
71.05265 | 11510.530 | 10469993 | 10470154 | 272 | 2496 | 0.8441358 | 0.0000000 | 0.0345679 | 0.0160494 | 3.3259259 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0011898 | TRUE | 0.0704939 | TRUE | VAT1L | NM_020927 NP_065978 | inside exon | inside | 191095 | inside exon | 0 | 9 | 9 | 3'UTR |
|
191518 | 189012 | 0.57 | FALSE |
| 341 | chr21 | 44485497 | 44485631 | 135 |
|
85.11997 | 11491.197 | 2431886 | 2432020 | 56 | 13860 | 3.3344444 | 0.4400000 | 0.7466667 | 0.1777778 | 11.9733333 | 7.629608e-01 | -1.307429e+00 | 4.766178e+00 | 0.0011979 | TRUE | 0.0705618 | TRUE | CBS | NM_000071 NM_001178008 NM_001178009 NP_000062 NP_001171479 NP_001171480 XM_006724057 XP_006724120 | inside exon | inside | 10841 | inside exon | 0 | 7 | 18 | inside transcription region |
|
23171 | 18313 | 0.57 | FALSE |
| 342 | chr6 | 120784755 | 120784945 | 191 |
|
60.09257 | 11477.681 | 11585308 | 11585498 | 321 | 1938 | 1.4573298 | 0.0000000 | 0.2701571 | 0.1183246 | 5.4408377 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0012019 | TRUE | 0.0705618 | TRUE | TBC1D32 | NM_152730 NP_689943 NR_104452 XM_005266861 XP_005266918 | downstream | downstream | 870699 | NA | NA | NA | 32 | NA |
|
255017 | 253659 | 0.57 | FALSE |
| 343 | chr4 | 189020189 | 189020329 | 141 |
|
81.33397 | 11468.090 | 12668285 | 12668425 | 499 | 3316 | 0.4950355 | 0.0000000 | 0.0000000 | 0.0000000 | 1.9801418 | NaN | NaN | 1.000000e+100 | 0.0012047 | TRUE | 0.0705618 | TRUE | TRIML2 | NM_173553 NP_775824 XM_006714136 XP_006714199 | inside exon | inside | 10093 | inside exon | 0 | 5 | 5 | inside transcription region |
|
10639 | 6378 | 0.57 | FALSE |
| 344 | chr13 | 100638130 | 100638280 | 151 |
|
75.86444 | 11455.530 | 5450767 | 5450917 | 193 | 5501 | 1.1099338 | 0.0000000 | 0.0000000 | 0.0000000 | 4.4397351 | NaN | NaN | 1.000000e+100 | 0.0012091 | TRUE | 0.0705618 | TRUE | ZIC2 | NM_007129 NP_009060 | inside exon | inside | 4104 | inside exon | 0 | 3 | 3 | 3'UTR |
|
4993 | 3617 | 0.57 | FALSE |
| 345 | chr15 | 43891356 | 43891586 | 231 |
|
49.54871 | 11445.752 | 2700119 | 2700349 | 82 | 5237 | 1.9813853 | 0.4294372 | 0.0000000 | 0.0874459 | 7.4086580 | -1.000000e+100 | -2.295985e+00 | 4.108693e+00 | 0.0012123 | TRUE | 0.0705618 | TRUE | CKMT1B | NM_020990 NP_066270 XM_005254150 XP_005254207 | NA | NA | 0 | NA | NA | NA | 9 | NA |
|
0 | 0 | 0.57 | FALSE |
| 346 | chr4 | 41262664 | 41262814 | 151 |
|
75.79535 | 11445.098 | 3753127 | 3753277 | 117 | 11482 | 7.8506623 | 2.9470199 | 0.5033113 | 0.7417219 | 27.2105960 | -2.549734e+00 | -1.990307e+00 | 3.206840e+00 | 0.0012128 | TRUE | 0.0705618 | TRUE | UCHL1 | NM_004181 NP_004172 | inside exon | inside | 3766 | inside exon | 0 | 3 | 8 | overlaps 5' UTR |
|
11548 | 7357 | 0.57 | FALSE |
| 347 | chr4 | 190400982 | 190401080 | 99 |
|
115.47696 | 11432.219 | 12676205 | 12676303 | 502 | 2056 | 0.7848485 | 0.0000000 | 0.2000000 | 0.0000000 | 2.9393939 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0012177 | TRUE | 0.0705618 | TRUE | FRG1 | NM_004477 NP_004468 XM_005262879 XM_005262880 XM_006714166 XM_006725445 XM_006725446 XM_006725447 XP_005262936 XP_005262937 XP_006714229 XP_006725508 XP_006725509 XP_006725510 | upstream | upstream | 460894 | NA | NA | NA | 9 | NA |
|
22385 | 22119 | 0.57 | FALSE |
| 348 | chr11 | 96461851 | 96462014 | 164 |
|
69.67388 | 11426.516 | 10912365 | 10912528 | 330 | 1985 | 2.3356707 | 0.1426829 | 0.2268293 | 0.3195122 | 8.6536585 | 6.687941e-01 | 1.163058e+00 | 5.922426e+00 | 0.0012206 | TRUE | 0.0705618 | TRUE | JRKL-AS1 | NR_047481 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.57 | FALSE |
| 349 | chr3 | 122628919 | 122629057 | 139 |
|
82.12934 | 11415.978 | 11760579 | 11760717 | 365 | 2945 | 0.5075540 | 0.0000000 | 0.0000000 | 0.0086331 | 2.0215827 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0012255 | TRUE | 0.0705618 | TRUE | SEMA5B | NM_001031702 NM_001256346 NM_001256347 NM_001256348 NM_018987 NP_001026872 NP_001243275 NP_001243276 NP_001243277 NR_046079 | NA | NA | 0 | NA | NA | NA | 23 | NA |
|
0 | 0 | 0.57 | FALSE |
| 350 | chr13 | 43439431 | 43439631 | 201 |
|
56.78489 | 11413.763 | 2379641 | 2379841 | 57 | 13438 | 0.6791045 | 0.0000000 | 0.0000000 | 0.0467662 | 2.6696517 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0012259 | TRUE | 0.0705618 | TRUE | EPSTI1 | NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959 | downstream | downstream | 126776 | NA | NA | NA | 13 | NA |
|
105883 | 103915 | 0.57 | FALSE |
| 351 | chr14 | 93399027 | 93399196 | 170 |
|
66.97446 | 11385.658 | 8679741 | 8679910 | 253 | 12111 | 1.0373529 | 0.0929412 | 0.0000000 | 0.0000000 | 4.0564706 | -1.000000e+100 | -1.000000e+100 | 5.447763e+00 | 0.0012375 | TRUE | 0.0710218 | TRUE | CHGA | NM_001275 NP_001266 XM_005267292 XM_006725160 XP_005267349 XP_006725223 | inside exon | inside | 9582 | inside exon | 0 | 6 | 7 | inside transcription region |
|
12193 | 11524 | 0.57 | FALSE |
| 352 | chrX | 2779619 | 2779763 | 145 |
|
78.26517 | 11348.450 | 516834 | 516978 | 8 | 1880 | 0.7620690 | 0.0000000 | 0.0000000 | 0.0000000 | 3.0482759 | NaN | NaN | 1.000000e+100 | 0.0012501 | TRUE | 0.0713508 | TRUE | GYG2 | NM_001079855 NM_001184702 NM_001184703 NM_001184704 NM_003918 NP_001073324 NP_001171631 NP_001171632 NP_001171633 NP_003909 XM_005274617 XM_005274618 XM_005274619 XM_005274621 XM_005274622 XM_006724521 XM_006724522 XP_005274674 XP_005274675 XP_005274676 XP_005274678 XP_005274679 XP_006724584 XP_006724585 | inside exon | inside | 6585 | inside exon | 0 | 4 | 6 | inside transcription region |
|
27827 | 26079 | 0.57 | FALSE |
| 353 | chr1 | 17301331 | 17301518 | 188 |
|
60.35846 | 11347.390 | 2835450 | 2835637 | 74 | 6061 | 2.0590426 | 0.1680851 | 0.1127660 | 0.0000000 | 7.9553191 | -5.758603e-01 | -1.000000e+100 | 5.564656e+00 | 0.0012503 | TRUE | 0.0713508 | TRUE | MFAP2 | NM_001135247 NM_001135248 NM_002403 NM_017459 NP_001128719 NP_001128720 NP_002394 NP_059453 | inside exon | inside | 6563 | inside exon | 0 | 9 | 9 | overlaps 3'UTR |
|
7082 | 3353 | 0.57 | FALSE |
| 354 | chr3 | 57126779 | 57126910 | 132 |
|
85.86415 | 11334.067 | 7280474 | 7280605 | 180 | 8154 | 0.6424242 | 0.0000000 | 0.0000000 | 0.0000000 | 2.5696970 | NaN | NaN | 1.000000e+100 | 0.0012566 | TRUE | 0.0715092 | TRUE | IL17RD | NM_017563 NP_060033 XM_005265238 XM_006713209 XP_005265295 XP_006713272 | inside exon | inside | 77421 | inside exon | 0 | 14 | 14 | 3'UTR |
|
80321 | 13261 | 0.57 | FALSE |
| 355 | chr18 | 6950781 | 6950915 | 135 |
|
83.82254 | 11316.044 | 515673 | 515807 | 17 | 3800 | 0.4688889 | 0.0000000 | 0.0000000 | 0.0000000 | 1.8755556 | NaN | NaN | 1.000000e+100 | 0.0012637 | TRUE | 0.0717128 | TRUE | LAMA1 | NM_005559 NP_005550 | inside exon | inside | 166898 | inside exon | 0 | 57 | 62 | inside transcription region |
|
176070 | 95663 | 0.57 | FALSE |
| 356 | chr2 | 77320588 | 77320749 | 162 |
|
69.69347 | 11290.342 | 8969230 | 8969391 | 213 | 11162 | 0.8793210 | 0.0000000 | 0.0000000 | 0.0000000 | 3.5172840 | NaN | NaN | 1.000000e+100 | 0.0012753 | TRUE | 0.0721631 | TRUE | LRRTM4 | NM_001134745 NM_001282924 NM_001282928 NM_024993 NP_001128217 NP_001269853 NP_001269857 NP_079269 | inside intron | inside | 428753 | inside intron | 344546 | 4 | 4 | inside transcription region |
|
774652 | 772976 | 0.59 | FALSE |
| 357 | chr16 | 65265129 | 65265283 | 155 |
|
72.63022 | 11257.683 | 8195835 | 8195989 | 214 | 5478 | 1.1048387 | 0.0116129 | 0.0761290 | 0.0000000 | 4.3316129 | 2.712718e+00 | -1.000000e+100 | 8.543032e+00 | 0.0012860 | TRUE | 0.0725651 | TRUE | LINC00922 | NM_001101346 NR_027755 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.59 | FALSE |
| 358 | chr2 | 5833489 | 5833608 | 120 |
|
93.66695 | 11240.034 | 203557 | 203676 | 16 | 8660 | 0.7125000 | 0.0000000 | 0.0000000 | 0.0000000 | 2.8500000 | NaN | NaN | 1.000000e+100 | 0.0012954 | TRUE | 0.0728918 | TRUE | SOX11 | NM_003108 NP_003099 | inside exon | inside | 690 | inside exon | 0 | 1 | 1 | inside transcription region |
|
8718 | 1325 | 0.59 | FALSE |
| 359 | chr4 | 189012646 | 189012806 | 161 |
|
69.63750 | 11211.637 | 12668034 | 12668194 | 498 | 639 | 0.7276398 | 0.2335404 | 0.0000000 | 0.0000000 | 2.6770186 | -1.000000e+100 | -1.000000e+100 | 3.518883e+00 | 0.0013088 | TRUE | 0.0734443 | TRUE | TRIML2 | NM_173553 NP_775824 XM_006714136 XP_006714199 | inside exon | inside | 13938 | inside exon | 0 | 8 | 8 | inside transcription region |
|
14317 | 13995 | 0.59 | FALSE |
| 360 | chr7 | 121684476 | 121684622 | 147 |
|
76.05366 | 11179.888 | 12250164 | 12250310 | 332 | 16420 | 0.9622449 | 0.0000000 | 0.0000000 | 0.0000000 | 3.8489796 | NaN | NaN | 1.000000e+100 | 0.0013221 | TRUE | 0.0738340 | TRUE | PTPRZ1 | NM_001206838 NM_001206839 NM_002851 NP_001193767 NP_001193768 NP_002842 XM_005250519 XM_006716076 XP_005250576 XP_006716139 | inside exon | inside | 171317 | inside exon | 0 | 23 | 30 | inside transcription region |
|
188931 | 187720 | 0.60 | FALSE |
| 361 | chr20 | 38900268 | 38900415 | 148 |
|
75.53378 | 11178.999 | 4402023 | 4402170 | 116 | 5560 | 0.4331081 | 0.0000000 | 0.0000000 | 0.0000000 | 1.7324324 | NaN | NaN | 1.000000e+100 | 0.0013231 | TRUE | 0.0738340 | TRUE | MAFB | NM_005461 NP_005452 | downstream | downstream | 417461 | NA | NA | NA | 1 | NA |
|
3359 | 971 | 0.60 | FALSE |
| 362 | chr19 | 54446205 | 54446446 | 242 |
|
46.13468 | 11164.593 | 11721484 | 11721725 | 396 | 1943 | 0.7371901 | 0.0000000 | 0.0000000 | 0.0000000 | 2.9487603 | NaN | NaN | 1.000000e+100 | 0.0013304 | TRUE | 0.0738593 | TRUE | CACNG7 | NM_031896 NP_114102 XM_005259124 XM_005259125 XP_005259181 XP_005259182 | inside exon | inside | 30214 | inside exon | 0 | 5 | 5 | 3'UTR |
|
30978 | 29461 | 0.61 | FALSE |
| 363 | chr13 | 56144625 | 56144732 | 108 |
|
103.36411 | 11163.323 | 3920131 | 3920238 | 121 | 13379 | 0.5703704 | 0.0000000 | 0.0000000 | 0.0000000 | 2.2814815 | NaN | NaN | 1.000000e+100 | 0.0013309 | TRUE | 0.0738593 | TRUE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.61 | FALSE |
| 364 | chr12 | 48366904 | 48367056 | 153 |
|
72.83838 | 11144.272 | 5325359 | 5325511 | 133 | 9891 | 0.6624183 | 0.0000000 | 0.0000000 | 0.0000000 | 2.6496732 | NaN | NaN | 1.000000e+100 | 0.0013382 | TRUE | 0.0740455 | TRUE | COL2A1 | NM_001844 NM_033150 NP_001835 NP_149162 XM_006719242 XP_006719305 | inside exon | inside | 31229 | inside exon | 0 | 53 | 53 | 3'UTR |
|
31537 | 30914 | 0.61 | FALSE |
| 365 | chr3 | 32939107 | 32939302 | 196 |
|
56.81909 | 11136.543 | 3400027 | 3400222 | 82 | 7451 | 3.4535714 | 0.7877551 | 1.1061224 | 0.6693878 | 11.2510204 | 4.896920e-01 | -2.349050e-01 | 3.836165e+00 | 0.0013416 | TRUE | 0.0740455 | TRUE | TRIM71 | NM_001039111 NP_001034200 | downstream | downstream | 79597 | NA | NA | NA | 4 | NA |
|
74261 | 73730 | 0.61 | FALSE |
| 366 | chr19 | 17715046 | 17715179 | 134 |
|
82.90644 | 11109.463 | 4872273 | 4872406 | 149 | 4082 | 0.7884328 | 0.0000000 | 0.1507463 | 0.0000000 | 3.0029851 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0013510 | TRUE | 0.0743610 | TRUE | UNC13A | NM_001080421 NP_001073890 XM_006722692 XP_006722755 | inside exon | inside | 83871 | inside exon | 0 | 44 | 44 | 3'UTR |
|
86913 | 82145 | 0.61 | FALSE |
| 367 | chr1 | 223200941 | 223201125 | 185 |
|
59.94251 | 11089.365 | 26369149 | 26369333 | 754 | 8216 | 1.4351351 | 0.0000000 | 0.0000000 | 0.0000000 | 5.7405405 | NaN | NaN | 1.000000e+100 | 0.0013593 | TRUE | 0.0746125 | TRUE | DISP1 | NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658 | downstream | downstream | 212510 | NA | NA | NA | 10 | NA |
|
190906 | 63148 | 0.61 | FALSE |
| 368 | chr12 | 7947540 | 7947867 | 328 |
|
33.73228 | 11064.188 | 1192013 | 1192340 | 43 | 6141 | 1.1428354 | 0.1231707 | 0.3371951 | 0.1231707 | 3.9878049 | 1.452924e+00 | 0.000000e+00 | 5.016863e+00 | 0.0013703 | TRUE | 0.0750136 | TRUE | NANOG | NM_024865 NP_079141 XM_005253484 XP_005253541 | inside exon | inside | 5545 | inside exon | 0 | 4 | 4 | overlaps 3'UTR |
|
6660 | 5480 | 0.61 | FALSE |
| 369 | chr2 | 189460247 | 189460602 | 356 |
|
31.04512 | 11052.062 | 18112127 | 18112482 | 489 | 1531 | 0.5483146 | 0.0000000 | 0.0000000 | 0.0000000 | 2.1932584 | NaN | NaN | 1.000000e+100 | 0.0013765 | TRUE | 0.0751469 | TRUE | GULP1 | NM_001252668 NM_001252669 NM_016315 NP_001239597 NP_001239598 NP_057399 NR_045562 NR_045563 XM_006712580 XM_006712581 XM_006712582 XM_006712583 XM_006712584 XM_006712585 XM_006712586 XM_006712587 XM_006712588 XM_006712589 XM_006712590 XM_006712591 XP_006712643 XP_006712644 XP_006712645 XP_006712646 XP_006712647 XP_006712648 XP_006712649 XP_006712650 XP_006712651 XP_006712652 XP_006712653 XP_006712654 | inside exon | inside | 302857 | inside exon | 0 | 13 | 13 | 3'UTR |
|
303262 | 116308 | 0.62 | FALSE |
| 370 | chrX | 2799342 | 2799487 | 146 |
|
75.57142 | 11033.427 | 517179 | 517324 | 11 | 1566 | 0.7931507 | 0.0000000 | 0.0000000 | 0.0000000 | 3.1726027 | NaN | NaN | 1.000000e+100 | 0.0013857 | TRUE | 0.0751645 | TRUE | GYG2 | NM_001079855 NM_001184702 NM_001184703 NM_001184704 NM_003918 NP_001073324 NP_001171631 NP_001171632 NP_001171633 NP_003909 XM_005274617 XM_005274618 XM_005274619 XM_005274621 XM_005274622 XM_006724521 XM_006724522 XP_005274674 XP_005274675 XP_005274676 XP_005274678 XP_005274679 XP_006724584 XP_006724585 | inside exon | inside | 26308 | inside exon | 0 | 6 | 6 | 3'UTR |
|
27827 | 26079 | 0.62 | FALSE |
| 371 | chr12 | 54982309 | 54982408 | 100 |
|
110.32664 | 11032.664 | 6731995 | 6732094 | 171 | 100 | 0.4940000 | 0.0000000 | 0.0000000 | 0.0000000 | 1.9760000 | NaN | NaN | 1.000000e+100 | 0.0013862 | TRUE | 0.0751645 | TRUE | PPP1R1A | NM_006741 NP_006732 XM_005268995 XM_006719471 XP_005269052 XP_006719534 | inside exon | inside | 35 | inside exon | 0 | 1 | 7 | 5' UTR |
|
9419 | 8101 | 0.62 | FALSE |
| 372 | chr7 | 131186015 | 131186277 | 263 |
|
41.93117 | 11027.897 | 13362697 | 13362959 | 370 | 10803 | 7.8420152 | 2.1437262 | 4.9034221 | 4.0653992 | 20.2555133 | 1.193668e+00 | 9.232764e-01 | 3.240122e+00 | 0.0013880 | TRUE | 0.0751645 | TRUE | PODXL | NM_001018111 NM_005397 NP_001018121 NP_005388 | inside exon | inside | 55099 | inside exon | 0 | 8 | 8 | 3'UTR |
|
56355 | 52048 | 0.62 | FALSE |
| 373 | chr16 | 65264698 | 65264912 | 215 |
|
51.20562 | 11009.208 | 8195435 | 8195649 | 214 | 5478 | 0.8379070 | 0.0000000 | 0.0000000 | 0.0000000 | 3.3516279 | NaN | NaN | 1.000000e+100 | 0.0013976 | TRUE | 0.0752588 | TRUE | LINC00922 | NM_001101346 NR_027755 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.62 | FALSE |
| 374 | chr4 | 55945391 | 55945583 | 193 |
|
56.92465 | 10986.457 | 4547257 | 4547449 | 135 | 3976 | 0.7344560 | 0.2176166 | 0.2113990 | 0.0000000 | 2.5088083 | -4.182020e-02 | -1.000000e+100 | 3.527142e+00 | 0.0014063 | TRUE | 0.0752588 | TRUE | KDR | NM_002253 NP_002244 | inside exon | inside | 46179 | inside exon | 0 | 30 | 30 | 3'UTR |
|
47336 | 45352 | 0.62 | FALSE |
| 375 | chr13 | 56150941 | 56151071 | 131 |
|
83.83355 | 10982.195 | 3923090 | 3923220 | 121 | 13379 | 0.5458015 | 0.0000000 | 0.0000000 | 0.0000000 | 2.1832061 | NaN | NaN | 1.000000e+100 | 0.0014092 | TRUE | 0.0752588 | TRUE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.62 | FALSE |
| 376 | chr13 | 56150772 | 56150918 | 147 |
|
74.63068 | 10970.710 | 3922943 | 3923089 | 121 | 13379 | 0.5340136 | 0.0802721 | 0.0000000 | 0.0000000 | 2.0557823 | -1.000000e+100 | -1.000000e+100 | 4.678645e+00 | 0.0014148 | TRUE | 0.0752588 | TRUE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.62 | FALSE |
| 377 | chr2 | 67559010 | 67559162 | 153 |
|
71.65524 | 10963.252 | 7342633 | 7342785 | 170 | 8050 | 0.7274510 | 0.1620915 | 0.0000000 | 0.0000000 | 2.7477124 | -1.000000e+100 | -1.000000e+100 | 4.083351e+00 | 0.0014177 | TRUE | 0.0752588 | TRUE | ETAA1 | NM_019002 NP_061875 XM_005264374 XM_005264375 XM_005264376 XM_005264377 XM_005264378 XP_005264431 XP_005264432 XP_005264433 XP_005264434 XP_005264435 | upstream | upstream | 65280 | NA | NA | NA | 6 | NA |
|
13091 | 12589 | 0.62 | FALSE |
| 378 | chr8 | 77557275 | 77557627 | 353 |
|
31.04512 | 10958.927 | 5854470 | 5854822 | 214 | 900 | 0.3529745 | 0.0000000 | 0.0000000 | 0.0000000 | 1.4118980 | NaN | NaN | 1.000000e+100 | 0.0014198 | TRUE | 0.0752588 | TRUE | ZFHX4-AS1 | NR_024360 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.62 | FALSE |
| 379 | chr20 | 62073759 | 62073884 | 126 |
|
86.94306 | 10954.826 | 7028104 | 7028229 | 193 | 8206 | 1.0146825 | 0.0000000 | 0.1396825 | 0.1253968 | 3.7936508 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0014216 | TRUE | 0.0752588 | TRUE | KCNQ2 | NM_004518 NM_172106 NM_172107 NM_172108 NM_172109 NP_004509 NP_742104 NP_742105 NP_742106 NP_742107 XM_006723787 XM_006723788 XM_006723789 XM_006723790 XM_006723791 XM_006723792 XP_006723850 XP_006723851 XP_006723852 XP_006723853 XP_006723854 XP_006723855 | inside exon | inside | 30109 | inside exon | 0 | 5 | 8 | inside transcription region |
|
38961 | 38718 | 0.62 | FALSE |
| 380 | chr11 | 27636430 | 27636731 | 302 |
|
36.26158 | 10950.998 | 2969161 | 2969462 | 79 | 3618 | 0.6687086 | 0.0000000 | 0.0000000 | 0.2476821 | 2.4271523 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0014234 | TRUE | 0.0752588 | TRUE | BDNF-AS | NR_002832 NR_033312 NR_033313 NR_033314 NR_033315 | NA | NA | 0 | NA | NA | NA | 7 | NA |
|
0 | 0 | 0.62 | FALSE |
| 381 | chr5 | 141693923 | 141694126 | 204 |
|
53.68028 | 10950.777 | 12326281 | 12326484 | 384 | 14439 | 0.6747549 | 0.0000000 | 0.0990196 | 0.0000000 | 2.6000000 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0014234 | TRUE | 0.0752588 | TRUE | SPRY4 | NM_001127496 NM_030964 NP_001120968 NP_112226 XM_005268518 XM_005268519 XM_006714798 XP_005268575 XP_005268576 XP_006714861 | inside exon | inside | 10494 | inside exon | 0 | 3 | 3 | inside transcription region |
|
14628 | 5556 | 0.62 | FALSE |
| 382 | chr15 | 43990212 | 43990346 | 135 |
|
80.90075 | 10921.601 | 2727625 | 2727759 | 83 | 5230 | 1.1507407 | 0.0000000 | 0.0000000 | 0.0000000 | 4.6029630 | NaN | NaN | 1.000000e+100 | 0.0014362 | TRUE | 0.0755484 | TRUE | CKMT1A | NM_001015001 NP_001015001 XM_005254498 XP_005254555 | inside exon | inside | 5128 | inside exon | 0 | 8 | 10 | inside transcription region |
|
6336 | 5038 | 0.63 | FALSE |
| 383 | chr1 | 55492412 | 55492512 | 101 |
|
108.12961 | 10921.091 | 9838569 | 9838669 | 249 | 2497 | 1.6559406 | 0.0000000 | 0.0000000 | 0.0000000 | 6.6237624 | NaN | NaN | 1.000000e+100 | 0.0014363 | TRUE | 0.0755484 | TRUE | PCSK9 | NM_174936 NP_777596 NR_110451 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.63 | FALSE |
| 384 | chr13 | 56151361 | 56151503 | 143 |
|
75.85189 | 10846.821 | 3923374 | 3923516 | 121 | 13379 | 1.0342657 | 0.0391608 | 0.0000000 | 0.0000000 | 4.0979021 | -1.000000e+100 | -1.000000e+100 | 6.709330e+00 | 0.0014725 | TRUE | 0.0770996 | TRUE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.63 | FALSE |
| 385 | chr11 | 27638052 | 27638211 | 160 |
|
67.77981 | 10844.769 | 2970400 | 2970559 | 79 | 3618 | 0.6971875 | 0.0000000 | 0.0000000 | 0.0337500 | 2.7550000 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0014735 | TRUE | 0.0770996 | TRUE | BDNF-AS | NR_002832 NR_033312 NR_033313 NR_033314 NR_033315 | NA | NA | 0 | NA | NA | NA | 7 | NA |
|
0 | 0 | 0.63 | FALSE |
| 386 | chr16 | 65263832 | 65264026 | 195 |
|
55.34134 | 10791.561 | 8194600 | 8194794 | 214 | 5478 | 2.8489744 | 1.4656410 | 0.6625641 | 0.3323077 | 8.9353846 | -1.145400e+00 | -2.140940e+00 | 2.607998e+00 | 0.0014994 | TRUE | 0.0780522 | TRUE | LINC00922 | NM_001101346 NR_027755 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.63 | FALSE |
| 387 | chr17 | 47115573 | 47115811 | 239 |
|
45.15214 | 10791.360 | 9731144 | 9731382 | 231 | 18864 | 0.5912134 | 0.0000000 | 0.0000000 | 0.0000000 | 2.3648536 | NaN | NaN | 1.000000e+100 | 0.0014994 | TRUE | 0.0780522 | TRUE | IGF2BP1 | NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012 | inside intron | inside | 40799 | inside intron | 2929 | 6 | 13 | inside transcription region |
|
58733 | 51698 | 0.63 | FALSE |
| 388 | chr7 | 121653691 | 121653875 | 185 |
|
58.24465 | 10775.261 | 12248841 | 12249025 | 330 | 3506 | 0.5764865 | 0.0000000 | 0.0000000 | 0.0000000 | 2.3059459 | NaN | NaN | 1.000000e+100 | 0.0015082 | TRUE | 0.0783058 | TRUE | PTPRZ1 | NM_001206838 NM_001206839 NM_002851 NP_001193767 NP_001193768 NP_002842 XM_005250519 XM_006716076 XP_005250576 XP_006716139 | inside intron | inside | 140532 | inside intron | -2328 | 12 | 30 | inside transcription region |
|
188931 | 187720 | 0.63 | FALSE |
| 389 | chr6 | 31132905 | 31133063 | 159 |
|
67.61051 | 10750.071 | 3619390 | 3619548 | 80 | 1705 | 16.7701258 | 0.9081761 | 1.0012579 | 0.5308176 | 64.6402516 | 1.407696e-01 | -7.747558e-01 | 6.153317e+00 | 0.0015225 | TRUE | 0.0788438 | TRUE | POU5F1 | NM_001173531 NM_001285986 NM_001285987 NM_002701 NM_203289 NP_001167002 NP_001272915 NP_001272916 NP_002692 NP_976034 | inside exon | inside | 5388 | inside exon | 0 | 4 | 5 | inside transcription region |
|
6337 | 6019 | 0.63 | FALSE |
| 390 | chr7 | 150037189 | 150037293 | 105 |
|
102.16034 | 10726.836 | 15684345 | 15684449 | 431 | 3322 | 4.7109524 | 0.1561905 | 0.5809524 | 0.8895238 | 17.2171429 | 1.895113e+00 | 2.509727e+00 | 6.784395e+00 | 0.0015342 | TRUE | 0.0792449 | TRUE | RARRES2 | NM_002889 NP_002880 XM_005250033 XP_005250090 | inside exon | inside | 1470 | inside exon | 0 | 3 | 6 | inside transcription region |
|
3356 | 1984 | 0.63 | FALSE |
| 391 | chr6 | 21367093 | 21367245 | 153 |
|
70.03319 | 10715.079 | 2378261 | 2378413 | 41 | 5423 | 1.1058824 | 0.0797386 | 0.0013072 | 0.0339869 | 4.3084967 | -5.930737e+00 | -1.230298e+00 | 5.755763e+00 | 0.0015403 | TRUE | 0.0793074 | TRUE | CDKAL1 | NM_017774 NP_060244 XM_006715127 XM_006715128 XP_006715190 XP_006715191 | downstream | downstream | 832405 | NA | NA | NA | 16 | NA |
|
697946 | 684688 | 0.63 | FALSE |
| 392 | chr7 | 150037525 | 150037718 | 194 |
|
55.19845 | 10708.499 | 15684491 | 15684684 | 431 | 3322 | 3.4902062 | 0.7536082 | 0.6340206 | 0.2628866 | 12.3103093 | -2.492850e-01 | -1.519374e+00 | 4.029908e+00 | 0.0015432 | TRUE | 0.0793074 | TRUE | RARRES2 | NM_002889 NP_002880 XM_005250033 XP_005250090 | inside exon | inside | 1045 | inside exon | 0 | 2 | 6 | overlaps 5' UTR |
|
3356 | 1984 | 0.63 | FALSE |
| 393 | chr3 | 57125252 | 57125427 | 176 |
|
60.73367 | 10689.125 | 7279420 | 7279595 | 180 | 8154 | 0.6880682 | 0.0000000 | 0.0000000 | 0.0000000 | 2.7522727 | NaN | NaN | 1.000000e+100 | 0.0015552 | TRUE | 0.0793728 | TRUE | IL17RD | NM_017563 NP_060033 XM_005265238 XM_006713209 XP_005265295 XP_006713272 | inside exon | inside | 78904 | inside exon | 0 | 14 | 14 | 3'UTR |
|
80321 | 13261 | 0.63 | FALSE |
| 394 | chr21 | 44478255 | 44478363 | 109 |
|
98.06521 | 10689.108 | 2430584 | 2430692 | 56 | 13860 | 4.0440367 | 0.2752294 | 0.4935780 | 0.1834862 | 15.2238532 | 8.426437e-01 | -5.849625e-01 | 5.789555e+00 | 0.0015552 | TRUE | 0.0793728 | TRUE | CBS | NM_000071 NM_001178008 NM_001178009 NP_000062 NP_001171479 NP_001171480 XM_006724057 XP_006724120 | inside exon | inside | 18109 | inside exon | 0 | 15 | 18 | inside transcription region |
|
23171 | 18313 | 0.63 | FALSE |
| 395 | chr13 | 51746073 | 51746203 | 131 |
|
81.55545 | 10683.764 | 3595937 | 3596067 | 92 | 10662 | 1.2007634 | 0.0427481 | 0.0000000 | 0.0000000 | 4.7603053 | -1.000000e+100 | -1.000000e+100 | 6.799050e+00 | 0.0015583 | TRUE | 0.0793728 | TRUE | LINC00371 | NR_102431 NR_102432 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.63 | FALSE |
| 396 | chr15 | 73996593 | 73996813 | 221 |
|
48.32318 | 10679.422 | 7120244 | 7120464 | 215 | 4815 | 1.4875566 | 0.0696833 | 0.2352941 | 0.5438914 | 5.1013575 | 1.755581e+00 | 2.964435e+00 | 6.193925e+00 | 0.0015603 | TRUE | 0.0793728 | TRUE | CD276 | NM_001024736 NM_025240 NP_001019907 NP_079516 XM_005254699 XM_005254700 XP_005254756 XP_005254757 | inside exon | inside | 19971 | inside exon | 0 | 6 | 10 | inside transcription region |
|
30237 | 13279 | 0.63 | FALSE |
| 397 | chr8 | 15621712 | 15621981 | 270 |
|
39.50314 | 10665.848 | 1075970 | 1076239 | 36 | 436 | 0.7605556 | 0.0000000 | 0.0000000 | 0.0000000 | 3.0422222 | NaN | NaN | 1.000000e+100 | 0.0015694 | TRUE | 0.0794420 | TRUE | TUSC3 | NM_006765 NM_178234 NP_006756 NP_839952 XM_005273646 XM_005273647 XM_005273648 XP_005273703 XP_005273704 XP_005273705 | NA | NA | 0 | NA | NA | NA | 2 | NA |
|
0 | 0 | 0.63 | FALSE |
| 398 | chrX | 113837320 | 113837467 | 148 |
|
72.06371 | 10665.429 | 6945132 | 6945279 | 300 | 5470 | 3.4337838 | 0.0932432 | 0.0364865 | 0.0000000 | 13.6054054 | -1.353637e+00 | -1.000000e+100 | 7.188965e+00 | 0.0015695 | TRUE | 0.0794420 | TRUE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | inside intron | inside | 18769 | inside intron | 10806 | 2 | 7 | 5' UTR |
|
326073 | 180632 | 0.63 | FALSE |
| 399 | chr12 | 7948253 | 7948463 | 211 |
|
50.35167 | 10624.202 | 1192630 | 1192840 | 43 | 6141 | 1.2445498 | 0.1109005 | 0.3355450 | 0.2426540 | 4.2890995 | 1.597241e+00 | 1.129635e+00 | 5.273337e+00 | 0.0015924 | TRUE | 0.0802457 | TRUE | NANOG | NM_024865 NP_079141 XM_005253484 XP_005253541 | inside exon | inside | 6258 | inside exon | 0 | 4 | 4 | 3'UTR |
|
6660 | 5480 | 0.64 | FALSE |
| 400 | chr3 | 54671898 | 54672038 | 141 |
|
75.33654 | 10622.452 | 7095493 | 7095633 | 171 | 7351 | 4.3879433 | 0.4170213 | 0.3730496 | 0.5900709 | 16.1716312 | -1.607534e-01 | 5.007674e-01 | 5.277200e+00 | 0.0015934 | TRUE | 0.0802457 | TRUE | ESRG | NR_027122 | NA | NA | 0 | NA | NA | NA | 4 | NA |
|
0 | 0 | 0.64 | FALSE |
| 401 | chr11 | 12965225 | 12965407 | 183 |
|
57.93157 | 10601.477 | 2051642 | 2051824 | 45 | 1584 | 0.8133880 | 0.3737705 | 0.0000000 | 0.1071038 | 2.7726776 | -1.000000e+100 | -1.803143e+00 | 2.891055e+00 | 0.0016041 | TRUE | 0.0803015 | TRUE | TEAD1 | NM_021961 NP_068780 | inside exon | inside | 63970 | inside exon | 0 | 7 | 7 | 3'UTR |
|
65029 | 57481 | 0.64 | FALSE |
| 402 | chr2 | 164459483 | 164459607 | 125 |
|
84.79950 | 10599.938 | 16027165 | 16027289 | 417 | 3078 | 0.6424000 | 0.0000000 | 0.0000000 | 0.0000000 | 2.5696000 | NaN | NaN | 1.000000e+100 | 0.0016047 | TRUE | 0.0803015 | TRUE | FIGN | NM_018086 NP_060556 XM_005246661 XM_005246662 XP_005246718 XP_005246719 | downstream | downstream | 132906 | NA | NA | NA | 3 | NA |
|
128395 | 125375 | 0.64 | FALSE |
| 403 | chr13 | 51744244 | 51744364 | 121 |
|
87.44572 | 10580.932 | 3594431 | 3594551 | 92 | 10662 | 0.5309917 | 0.0000000 | 0.0000000 | 0.0000000 | 2.1239669 | NaN | NaN | 1.000000e+100 | 0.0016146 | TRUE | 0.0803015 | TRUE | LINC00371 | NR_102431 NR_102432 | NA | NA | 0 | NA | NA | NA | 5 | NA |
|
0 | 0 | 0.65 | FALSE |
| 404 | chr17 | 47123252 | 47123375 | 124 |
|
85.29728 | 10576.863 | 9731893 | 9732016 | 231 | 18864 | 0.7254032 | 0.0000000 | 0.0000000 | 0.0000000 | 2.9016129 | NaN | NaN | 1.000000e+100 | 0.0016172 | TRUE | 0.0803015 | TRUE | IGF2BP1 | NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012 | inside exon | inside | 48478 | inside exon | 0 | 11 | 13 | inside transcription region |
|
58733 | 51698 | 0.65 | FALSE |
| 405 | chr1 | 26737877 | 26738073 | 197 |
|
53.62101 | 10563.339 | 4577539 | 4577735 | 114 | 2417 | 3.0578680 | 0.0000000 | 0.0000000 | 0.0000000 | 12.2314721 | NaN | NaN | 1.000000e+100 | 0.0016250 | TRUE | 0.0803015 | TRUE | LIN28A | NM_024674 NP_078950 XM_006710899 XM_006710900 XP_006710962 XP_006710963 | inside exon | inside | 608 | inside exon | 0 | 2 | 4 | inside transcription region |
|
18950 | 15566 | 0.65 | FALSE |
| 406 | chr15 | 26792227 | 26792327 | 101 |
|
104.56038 | 10560.599 | 475324 | 475424 | 11 | 4122 | 0.7787129 | 0.0000000 | 0.0000000 | 0.0000000 | 3.1148515 | NaN | NaN | 1.000000e+100 | 0.0016271 | TRUE | 0.0803015 | TRUE | GABRB3 | NM_000814 NM_001191320 NM_001191321 NM_001278631 NM_021912 NP_000805 NP_001178249 NP_001178250 NP_001265560 NP_068712 NR_103801 | inside exon | inside | 392359 | inside exon | 0 | 10 | 10 | 3'UTR |
|
395992 | 391643 | 0.65 | FALSE |
| 407 | chr13 | 56157678 | 56157780 | 103 |
|
102.49381 | 10556.863 | 3927811 | 3927913 | 121 | 13379 | 0.4733010 | 0.0000000 | 0.0000000 | 0.0000000 | 1.8932039 | NaN | NaN | 1.000000e+100 | 0.0016290 | TRUE | 0.0803015 | TRUE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.65 | FALSE |
| 408 | chr15 | 26791985 | 26792215 | 231 |
|
45.57193 | 10527.116 | 475093 | 475323 | 11 | 4122 | 0.5785714 | 0.0000000 | 0.0000000 | 0.0000000 | 2.3142857 | NaN | NaN | 1.000000e+100 | 0.0016438 | TRUE | 0.0803015 | TRUE | GABRB3 | NM_000814 NM_001191320 NM_001191321 NM_001278631 NM_021912 NP_000805 NP_001178249 NP_001178250 NP_001265560 NP_068712 NR_103801 | inside exon | inside | 392471 | inside exon | 0 | 10 | 10 | 3'UTR |
|
395992 | 391643 | 0.65 | FALSE |
| 409 | chr6 | 3225664 | 3225927 | 264 |
|
39.86839 | 10525.255 | 465301 | 465564 | 12 | 3330 | 20.8198864 | 11.7886364 | 14.7166667 | 9.4219697 | 47.3522727 | 3.200541e-01 | -3.232962e-01 | 2.006037e+00 | 0.0016451 | TRUE | 0.0803015 | TRUE | TUBB2B | NM_178012 NP_821080 | inside exon | inside | 2041 | inside exon | 0 | 4 | 4 | inside transcription region |
|
3473 | 2792 | 0.65 | FALSE |
| 410 | chr12 | 110719136 | 110719284 | 149 |
|
70.60827 | 10520.632 | 12183242 | 12183390 | 332 | 149 | 11.1996644 | 32.4308725 | 5.0899329 | 5.2496644 | 2.0281879 | -2.671649e+00 | -2.627071e+00 | -3.999105e+00 | 0.0016472 | TRUE | 0.0803015 | TRUE | ATP2A2 | NM_001135765 NM_001681 NM_170665 NP_001672 NP_733765 XM_005253888 XP_005253945 XR_243009 | inside exon | inside | 104 | inside exon | 0 | 1 | 21 | 5' UTR |
|
69865 | 68515 | 0.65 | FALSE |
| 411 | chr6 | 132228048 | 132228148 | 101 |
|
104.15843 | 10520.001 | 12338916 | 12339016 | 348 | 11438 | 0.7702970 | 0.0000000 | 0.0000000 | 0.0000000 | 3.0811881 | NaN | NaN | 1.000000e+100 | 0.0016477 | TRUE | 0.0803015 | TRUE | ENPP1 | NM_006208 NP_006199 XM_005267017 XP_005267074 | downstream | downstream | 98892 | NA | NA | NA | 25 | NA |
|
87139 | 82475 | 0.65 | FALSE |
| 412 | chr1 | 223198377 | 223198524 | 148 |
|
71.06830 | 10518.108 | 26367074 | 26367221 | 754 | 8216 | 2.6807432 | 0.1216216 | 0.2837838 | 0.4621622 | 9.8554054 | 1.222392e+00 | 1.925999e+00 | 6.340444e+00 | 0.0016495 | TRUE | 0.0803015 | TRUE | DISP1 | NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658 | downstream | downstream | 209946 | NA | NA | NA | 10 | NA |
|
190906 | 63148 | 0.65 | FALSE |
| 413 | chr13 | 56149799 | 56149905 | 107 |
|
98.29383 | 10517.440 | 3922219 | 3922325 | 121 | 13379 | 0.8752336 | 0.0000000 | 0.0000000 | 0.0000000 | 3.5009346 | NaN | NaN | 1.000000e+100 | 0.0016498 | TRUE | 0.0803015 | TRUE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.65 | FALSE |
| 414 | chrX | 5809466 | 5809630 | 165 |
|
63.71923 | 10513.672 | 648990 | 649154 | 19 | 2072 | 0.4406061 | 0.0715152 | 0.0000000 | 0.0000000 | 1.6909091 | -1.000000e+100 | -1.000000e+100 | 4.563406e+00 | 0.0016527 | TRUE | 0.0803015 | TRUE | NLGN4X | NM_001282145 NM_001282146 NM_020742 NM_181332 NP_001269074 NP_001269075 NP_065793 NP_851849 XM_005274564 XM_005274565 XM_005274566 XM_005274568 XM_006724504 XP_005274621 XP_005274622 XP_005274623 XP_005274625 XP_006724567 | inside exon | inside | 337076 | inside exon | 0 | 7 | 7 | 3'UTR |
|
338623 | 258649 | 0.65 | FALSE |
| 415 | chr22 | 44345535 | 44345636 | 102 |
|
103.00462 | 10506.471 | 5573039 | 5573140 | 142 | 6566 | 0.6004902 | 0.0000000 | 0.0000000 | 0.0000000 | 2.4019608 | NaN | NaN | 1.000000e+100 | 0.0016565 | TRUE | 0.0803015 | TRUE | PNPLA3 | NM_025225 NP_079501 | NA | NA | 0 | NA | NA | NA | 10 | NA |
|
0 | 0 | 0.65 | FALSE |
| 416 | chr4 | 93524782 | 93524901 | 120 |
|
87.50493 | 10500.592 | 7118893 | 7119012 | 252 | 3836 | 0.4733333 | 0.0000000 | 0.0000000 | 0.0000000 | 1.8933333 | NaN | NaN | 1.000000e+100 | 0.0016582 | TRUE | 0.0803015 | TRUE | GRID2 | NM_001286838 NM_001510 NP_001273767 NP_001501 XM_006714195 XP_006714258 | inside intron | inside | 299232 | inside intron | -13345 | 2 | 15 | inside transcription region |
|
1468099 | 1467841 | 0.65 | FALSE |
| 417 | chr16 | 65264044 | 65264301 | 258 |
|
40.62704 | 10481.776 | 8194812 | 8195069 | 214 | 5478 | 2.1147287 | 0.0457364 | 0.1589147 | 0.1186047 | 8.1356589 | 1.796837e+00 | 1.374745e+00 | 7.474772e+00 | 0.0016706 | TRUE | 0.0805505 | TRUE | LINC00922 | NM_001101346 NR_027755 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.65 | FALSE |
| 418 | chr16 | 51173735 | 51173966 | 232 |
|
45.16783 | 10478.936 | 7328663 | 7328894 | 178 | 4772 | 0.4838362 | 0.0000000 | 0.0000000 | 0.0000000 | 1.9353448 | NaN | NaN | 1.000000e+100 | 0.0016714 | TRUE | 0.0805505 | TRUE | SALL1 | NM_001127892 NM_002968 NP_001121364 NP_002959 XM_006721241 XP_006721304 | inside exon | inside | 11217 | inside exon | 0 | 2 | 3 | inside transcription region |
|
14160 | 4818 | 0.65 | FALSE |
| 419 | chr19 | 54445290 | 54445539 | 250 |
|
41.79278 | 10448.195 | 11720783 | 11721032 | 396 | 1943 | 0.5056000 | 0.0000000 | 0.0000000 | 0.0000000 | 2.0224000 | NaN | NaN | 1.000000e+100 | 0.0016886 | TRUE | 0.0810539 | TRUE | CACNG7 | NM_031896 NP_114102 XM_005259124 XM_005259125 XP_005259181 XP_005259182 | inside exon | inside | 29299 | inside exon | 0 | 5 | 5 | inside transcription region |
|
30978 | 29461 | 0.66 | FALSE |
| 420 | chr13 | 56153923 | 56154055 | 133 |
|
78.53720 | 10445.448 | 3925577 | 3925709 | 121 | 13379 | 0.9563910 | 0.0000000 | 0.0000000 | 0.0000000 | 3.8255639 | NaN | NaN | 1.000000e+100 | 0.0016899 | TRUE | 0.0810539 | TRUE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.66 | FALSE |
| 421 | chr20 | 38903204 | 38903358 | 155 |
|
67.32892 | 10435.983 | 4404397 | 4404551 | 116 | 5560 | 1.4119355 | 0.0000000 | 0.0709677 | 0.0000000 | 5.5767742 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0016954 | TRUE | 0.0811253 | TRUE | MAFB | NM_005461 NP_005452 | downstream | downstream | 414518 | NA | NA | NA | 1 | NA |
|
3359 | 971 | 0.66 | FALSE |
| 422 | chr12 | 59718746 | 59718947 | 202 |
|
51.55629 | 10414.370 | 7620836 | 7621037 | 197 | 6694 | 1.0264851 | 0.0000000 | 0.0000000 | 0.0000000 | 4.1059406 | NaN | NaN | 1.000000e+100 | 0.0017087 | TRUE | 0.0815680 | TRUE | SLC16A7 | NM_001270622 NM_001270623 NM_004731 NP_001257551 NP_001257552 NP_004722 NR_073055 NR_073056 XM_005269231 XM_006719693 XP_005269288 XP_006719756 | upstream | upstream | 270874 | NA | NA | NA | 6 | NA |
|
193814 | 74877 | 0.66 | FALSE |
| 423 | chr7 | 83094324 | 83094479 | 156 |
|
66.62527 | 10393.542 | 8282879 | 8283034 | 218 | 5588 | 1.6435897 | 0.0000000 | 0.0000000 | 0.0000000 | 6.5743590 | NaN | NaN | 1.000000e+100 | 0.0017196 | TRUE | 0.0815922 | TRUE | SEMA3E | NM_001178129 NM_012431 NP_001171600 NP_036563 XM_006716187 XP_006716250 | inside intron | inside | 184000 | inside intron | -1319 | 4 | 17 | inside transcription region |
|
285257 | 280956 | 0.66 | FALSE |
| 424 | chr9 | 99981587 | 99981771 | 185 |
|
56.16582 | 10390.676 | 6936029 | 6936213 | 238 | 7264 | 1.0443243 | 0.0000000 | 0.6659459 | 0.0529730 | 3.4583784 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0017214 | TRUE | 0.0815922 | TRUE | LOC100499484 | NR_036526 | NA | NA | 0 | NA | NA | NA | 16 | NA |
|
0 | 0 | 0.66 | FALSE |
| 425 | chr4 | 183721801 | 183721989 | 189 |
|
54.93701 | 10383.095 | 12325302 | 12325490 | 478 | 8341 | 0.6605820 | 0.0000000 | 0.0000000 | 0.0000000 | 2.6423280 | NaN | NaN | 1.000000e+100 | 0.0017252 | TRUE | 0.0815922 | TRUE | TENM3 | NM_001080477 NP_001073946 XM_006714256 XM_006714257 XM_006714258 XP_006714319 XP_006714320 XP_006714321 | inside exon | inside | 476702 | inside exon | 0 | 27 | 27 | 3'UTR |
|
479078 | 476330 | 0.66 | FALSE |
| 426 | chr2 | 241685155 | 241685326 | 172 |
|
60.36456 | 10382.705 | 23645417 | 23645588 | 635 | 9104 | 0.6037791 | 0.0000000 | 0.0000000 | 0.0000000 | 2.4151163 | NaN | NaN | 1.000000e+100 | 0.0017254 | TRUE | 0.0815922 | TRUE | KIF1A | NM_001244008 NM_004321 NP_001230937 NP_004312 XM_005247022 XM_005247023 XM_005247024 XM_005247026 XM_005247027 XM_005247028 XM_006712601 XM_006712602 XM_006712603 XM_006712604 XM_006712605 XP_005247079 XP_005247080 XP_005247081 XP_005247083 XP_005247084 XP_005247085 XP_006712664 XP_006712665 XP_006712666 XP_006712667 XP_006712668 | inside exon | inside | 74399 | inside exon | 0 | 31 | 43 | inside transcription region |
|
96895 | 74339 | 0.66 | FALSE |
| 427 | chr12 | 7942037 | 7942154 | 118 |
|
87.87290 | 10369.002 | 1191156 | 1191273 | 42 | 325 | 1.3703390 | 0.0593220 | 0.0830508 | 0.2288136 | 5.1101695 | 4.854268e-01 | 1.947533e+00 | 6.428659e+00 | 0.0017329 | TRUE | 0.0816233 | TRUE | NANOG | NM_024865 NP_079141 XM_005253484 XP_005253541 | inside exon | inside | 42 | inside exon | 0 | 1 | 4 | 5' UTR |
|
6660 | 5480 | 0.66 | FALSE |
| 428 | chr20 | 31387959 | 31388104 | 146 |
|
71.01235 | 10367.804 | 2807852 | 2807997 | 85 | 24597 | 3.8212329 | 1.7369863 | 1.8684932 | 1.1575342 | 10.5219178 | 1.052889e-01 | -5.855315e-01 | 2.598739e+00 | 0.0017342 | TRUE | 0.0816233 | TRUE | DNMT3B | NM_001207055 NM_001207056 NM_006892 NM_175848 NM_175849 NM_175850 NP_001193984 NP_001193985 NP_008823 NP_787044 NP_787045 NP_787046 | inside exon | inside | 8552 | inside exon | 0 | 10 | 14 | inside transcription region |
|
17755 | 16212 | 0.66 | FALSE |
| 429 | chr9 | 121253334 | 121253450 | 117 |
|
88.49919 | 10354.405 | 8707992 | 8708108 | 300 | 4272 | 2.0572650 | 0.0000000 | 0.0000000 | 0.0000000 | 8.2290598 | NaN | NaN | 1.000000e+100 | 0.0017431 | TRUE | 0.0817297 | TRUE | BRINP1 | NM_014618 NP_055433 | downstream | downstream | 878289 | NA | NA | NA | 8 | NA |
|
202831 | 146271 | 0.66 | FALSE |
| 430 | chr1 | 62675574 | 62675850 | 277 |
|
37.36241 | 10349.388 | 10231825 | 10232101 | 267 | 17384 | 6.8481949 | 2.1862816 | 4.4194946 | 2.6180505 | 18.1689531 | 1.015402e+00 | 2.600137e-01 | 3.054924e+00 | 0.0017458 | TRUE | 0.0817297 | TRUE | L1TD1 | NM_001164835 NM_019079 NP_001158307 NP_061952 | inside exon | inside | 15100 | inside exon | 0 | 5 | 5 | inside transcription region |
|
17527 | 4743 | 0.66 | FALSE |
| 431 | chr12 | 8948468 | 8948616 | 149 |
|
69.35344 | 10333.662 | 1368238 | 1368386 | 52 | 8328 | 0.9228188 | 0.0000000 | 0.0000000 | 0.0000000 | 3.6912752 | NaN | NaN | 1.000000e+100 | 0.0017557 | TRUE | 0.0817297 | TRUE | RIMKLB | NM_020734 NP_065785 XM_006719116 XM_006719117 XM_006719118 XM_006719119 XM_006719120 XM_006719121 XM_006719122 XM_006719123 XM_006719124 XM_006719125 XM_006719126 XM_006719127 XM_006719128 XP_006719179 XP_006719180 XP_006719181 XP_006719182 XP_006719183 XP_006719184 XP_006719185 XP_006719186 XP_006719187 XP_006719188 XP_006719189 XP_006719190 XP_006719191 | NA | NA | 0 | NA | NA | NA | 9 | NA |
|
0 | 0 | 0.66 | FALSE |
| 432 | chrX | 29995973 | 29996073 | 101 |
|
102.30117 | 10332.418 | 2040408 | 2040508 | 80 | 101 | 1.0777228 | 0.0000000 | 0.0000000 | 0.0000000 | 4.3108911 | NaN | NaN | 1.000000e+100 | 0.0017564 | TRUE | 0.0817297 | TRUE | IL1RAPL1 | NM_014271 NP_055086 XM_005274441 XP_005274498 | downstream | downstream | 1390292 | NA | NA | NA | 11 | NA |
|
1368336 | 1166476 | 0.66 | FALSE |
| 433 | chr1 | 6305260 | 6305418 | 159 |
|
64.97825 | 10331.541 | 924353 | 924511 | 30 | 1346 | 0.4918239 | 0.0000000 | 0.0000000 | 0.0000000 | 1.9672956 | NaN | NaN | 1.000000e+100 | 0.0017569 | TRUE | 0.0817297 | TRUE | HES3 | NM_001024598 NP_001019769 | inside exon | inside | 1008 | inside exon | 0 | 4 | 4 | inside transcription region |
|
1386 | 1141 | 0.66 | FALSE |
| 434 | chr3 | 65340344 | 65340503 | 160 |
|
64.52732 | 10324.372 | 7962071 | 7962230 | 214 | 3821 | 0.5381250 | 0.0012500 | 0.0000000 | 0.0000000 | 2.1512500 | -1.000000e+100 | -1.000000e+100 | 1.074903e+01 | 0.0017608 | TRUE | 0.0817297 | TRUE | MAGI1 | NM_001033057 NM_004742 NM_015520 NP_001028229 NP_004733 NP_056335 XM_005265563 XM_005265564 XM_005265565 XM_005265566 XM_005265568 XM_005265570 XM_005265571 XM_005265574 XM_006713407 XM_006713408 XM_006713409 XM_006713410 XM_006713411 XM_006713412 XM_006713413 XM_006713414 XP_005265620 XP_005265621 XP_005265622 XP_005265623 XP_005265625 XP_005265627 XP_005265628 XP_005265631 XP_006713470 XP_006713471 XP_006713472 XP_006713473 XP_006713474 XP_006713475 XP_006713476 XP_006713477 | inside exon | inside | 684006 | inside exon | 0 | 23 | 23 | 3'UTR |
|
684603 | 681930 | 0.66 | FALSE |
| 435 | chr13 | 53307354 | 53307494 | 141 |
|
73.11638 | 10309.410 | 3909156 | 3909296 | 107 | 141 | 1.1879433 | 0.0000000 | 0.1829787 | 0.0000000 | 4.5687943 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0017682 | TRUE | 0.0818874 | TRUE | LECT1 | NM_001011705 NM_007015 NP_001011705 NP_008946 XM_006719760 XM_006719761 XP_006719823 XP_006719824 | inside exon | inside | 6453 | inside exon | 0 | 3 | 6 | inside transcription region |
|
36547 | 36187 | 0.66 | FALSE |
| 436 | chr10 | 53794232 | 53794387 | 156 |
|
66.00248 | 10296.386 | 5589483 | 5589638 | 138 | 5761 | 5.5849359 | 0.0961538 | 0.2512821 | 0.1974359 | 21.7948718 | 1.385891e+00 | 1.037968e+00 | 7.824428e+00 | 0.0017750 | TRUE | 0.0820143 | TRUE | PRKG1 | NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029 | inside intron | inside | 959998 | inside intron | 19857 | 6 | 18 | inside transcription region |
|
1223876 | 1219309 | 0.66 | FALSE |
| 437 | chr16 | 65266378 | 65266543 | 166 |
|
61.84592 | 10266.423 | 8196834 | 8196999 | 214 | 5478 | 0.5385542 | 0.0000000 | 0.0000000 | 0.0000000 | 2.1542169 | NaN | NaN | 1.000000e+100 | 0.0017934 | TRUE | 0.0826717 | TRUE | LINC00922 | NM_001101346 NR_027755 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.66 | FALSE |
| 438 | chr3 | 109047969 | 109048200 | 232 |
|
44.19498 | 10253.235 | 10143872 | 10144103 | 311 | 11345 | 1.0782328 | 0.0870690 | 0.5931034 | 0.0913793 | 3.5413793 | 2.768053e+00 | 6.970900e-02 | 5.346009e+00 | 0.0018031 | TRUE | 0.0828459 | TRUE | DPPA4 | NM_018189 NP_060659 | inside intron | inside | 8219 | inside intron | 41 | 5 | 6 | inside transcription region |
|
11431 | 8594 | 0.66 | FALSE |
| 439 | chr16 | 65266239 | 65266375 | 137 |
|
74.80627 | 10248.459 | 8196697 | 8196833 | 214 | 5478 | 0.6021898 | 0.0000000 | 0.0000000 | 0.0000000 | 2.4087591 | NaN | NaN | 1.000000e+100 | 0.0018054 | TRUE | 0.0828459 | TRUE | LINC00922 | NM_001101346 NR_027755 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.66 | FALSE |
| 440 | chr3 | 78373033 | 78373178 | 146 |
|
69.96685 | 10215.160 | 9029527 | 9029672 | 256 | 2419 | 1.4633562 | 0.3575342 | 0.0000000 | 0.0000000 | 5.4958904 | -1.000000e+100 | -1.000000e+100 | 3.942200e+00 | 0.0018278 | TRUE | 0.0836825 | TRUE | ROBO1 | NM_001145845 NM_002941 NM_133631 NP_001139317 NP_002932 NP_598334 XM_006713276 XM_006713277 XM_006713278 XP_006713339 XP_006713340 XP_006713341 | downstream | downstream | 364744 | NA | NA | NA | 23 | NA |
|
91534 | 60790 | 0.66 | FALSE |
| 441 | chr1 | 114524494 | 114524661 | 168 |
|
60.73377 | 10203.273 | 15141244 | 15141411 | 417 | 1807 | 0.9767857 | 0.2702381 | 0.2833333 | 0.2059524 | 3.1476190 | 6.826930e-02 | -3.919203e-01 | 3.541958e+00 | 0.0018362 | TRUE | 0.0838756 | TRUE | OLFML3 | NM_001286352 NM_001286353 NM_020190 NP_001273281 NP_001273282 NP_064575 XM_006710778 XP_006710841 | inside exon | inside | 2464 | inside exon | 0 | 2 | 2 | 3'UTR |
|
2846 | 788 | 0.66 | FALSE |
| 442 | chr13 | 110802399 | 110802635 | 237 |
|
43.00039 | 10191.093 | 5744250 | 5744486 | 212 | 1296 | 1.2103376 | 1.1518987 | 0.5721519 | 0.2185654 | 2.8987342 | -1.009544e+00 | -2.397877e+00 | 1.331409e+00 | 0.0018438 | TRUE | 0.0838756 | TRUE | COL4A1 | NM_001845 NP_001836 | inside exon | inside | 156861 | inside exon | 0 | 52 | 52 | 3'UTR |
|
158186 | 156664 | 0.67 | FALSE |
| 443 | chrX | 86941110 | 86941277 | 168 |
|
60.65369 | 10189.820 | 5940401 | 5940568 | 237 | 2994 | 1.0657738 | 0.0583333 | 0.3166667 | 0.0428571 | 3.8452381 | 2.440573e+00 | -4.447848e-01 | 6.042609e+00 | 0.0018445 | TRUE | 0.0838756 | TRUE | KLHL4 | NM_019117 NM_057162 NP_061990 NP_476503 | downstream | downstream | 168395 | NA | NA | NA | 11 | NA |
|
152335 | 148637 | 0.67 | FALSE |
| 444 | chr8 | 72590866 | 72590966 | 101 |
|
100.78528 | 10179.314 | 5587272 | 5587372 | 200 | 5384 | 0.6143564 | 0.0000000 | 0.0000000 | 0.0000000 | 2.4574257 | NaN | NaN | 1.000000e+100 | 0.0018521 | TRUE | 0.0840326 | TRUE | MSC | NM_005098 NP_005089 | downstream | downstream | 165765 | NA | NA | NA | 2 | NA |
|
2954 | 1517 | 0.68 | FALSE |
| 445 | chr4 | 5822515 | 5822748 | 234 |
|
43.41234 | 10158.488 | 1191460 | 1191693 | 32 | 262 | 2.0995726 | 1.1222222 | 0.7487179 | 0.8487179 | 5.6786325 | -5.838641e-01 | -4.030013e-01 | 2.339185e+00 | 0.0018657 | TRUE | 0.0844606 | TRUE | EVC | NM_014556 NM_153717 NP_714928 XM_005247952 XM_006713865 XM_006713866 XM_006713867 XP_005248009 XP_006713928 XP_006713929 XP_006713930 XR_427471 XR_427472 XR_427473 XR_427474 XR_427475 XR_427476 XR_427477 | NA | NA | 0 | NA | NA | NA | 24 | NA |
|
0 | 0 | 0.69 | FALSE |
| 446 | chr16 | 51172900 | 51173017 | 118 |
|
85.85942 | 10131.412 | 7328257 | 7328374 | 178 | 4772 | 0.6360169 | 0.0000000 | 0.0000000 | 0.0000000 | 2.5440678 | NaN | NaN | 1.000000e+100 | 0.0018819 | TRUE | 0.0846715 | TRUE | SALL1 | NM_001127892 NM_002968 NP_001121364 NP_002959 XM_006721241 XP_006721304 | inside exon | inside | 12166 | inside exon | 0 | 2 | 3 | inside transcription region |
|
14160 | 4818 | 0.69 | FALSE |
| 447 | chr16 | 9760985 | 9761084 | 100 |
|
101.20896 | 10120.896 | 1950655 | 1950754 | 53 | 7029 | 0.4670000 | 0.0000000 | 0.0000000 | 0.0000000 | 1.8680000 | NaN | NaN | 1.000000e+100 | 0.0018883 | TRUE | 0.0846715 | TRUE | GRIN2A | NM_000833 NM_001134407 NM_001134408 NP_000824 NP_001127879 NP_001127880 XM_005255267 XM_005255268 XP_005255324 XP_005255325 | downstream | downstream | 515179 | NA | NA | NA | 13 | NA |
|
428998 | 417262 | 0.69 | FALSE |
| 448 | chr13 | 96238297 | 96238390 | 94 |
|
107.49639 | 10104.661 | 4921004 | 4921097 | 174 | 6061 | 0.6292553 | 0.0000000 | 0.0000000 | 0.0000000 | 2.5170213 | NaN | NaN | 1.000000e+100 | 0.0018996 | TRUE | 0.0846715 | TRUE | DZIP1 | NM_014934 NM_198968 NP_055749 NP_945319 XM_005254032 XM_006719916 XM_006719917 XM_006719918 XM_006719919 XM_006719920 XM_006719921 XP_005254089 XP_006719979 XP_006719980 XP_006719981 XP_006719982 XP_006719983 XP_006719984 | inside exon | inside | 58570 | inside exon | 0 | 20 | 22 | inside transcription region |
|
66504 | 59795 | 0.69 | FALSE |
| 449 | chr15 | 78633385 | 78633563 | 179 |
|
56.44260 | 10103.226 | 7976412 | 7976590 | 232 | 3177 | 1.0790503 | 0.0000000 | 0.0000000 | 0.0000000 | 4.3162011 | NaN | NaN | 1.000000e+100 | 0.0019006 | TRUE | 0.0846715 | TRUE | CRABP1 | NM_004378 NP_004369 | inside exon | inside | 719 | inside exon | 0 | 2 | 4 | inside transcription region |
|
7906 | 7548 | 0.69 | FALSE |
| 450 | chr2 | 237074211 | 237074398 | 188 |
|
53.73981 | 10103.084 | 23176210 | 23176397 | 622 | 860 | 0.3880319 | 0.0000000 | 0.0000000 | 0.0000000 | 1.5521277 | NaN | NaN | 1.000000e+100 | 0.0019006 | TRUE | 0.0846715 | TRUE | GBX2 | NM_001485 NP_001476 XM_005246071 XP_005246128 | overlaps 3' | overlaps 3' | 2254 | inside exon | 0 | 3 | 3 | 3'UTR |
|
2345 | 1612 | 0.69 | FALSE |
| 451 | chr2 | 27171656 | 27171898 | 243 |
|
41.55858 | 10098.734 | 2271117 | 2271359 | 64 | 5028 | 0.4956790 | 0.0000000 | 0.0000000 | 0.0000000 | 1.9827160 | NaN | NaN | 1.000000e+100 | 0.0019029 | TRUE | 0.0846715 | TRUE | DPYSL5 | NM_001253723 NM_001253724 NM_020134 NP_001240652 NP_001240653 NP_064519 | inside exon | inside | 100364 | inside exon | 0 | 13 | 13 | 3'UTR |
|
101927 | 48495 | 0.69 | FALSE |
| 452 | chr5 | 7266287 | 7266379 | 93 |
|
108.56426 | 10096.476 | 411872 | 411964 | 14 | 2832 | 0.4338710 | 0.0000000 | 0.0000000 | 0.0000000 | 1.7354839 | NaN | NaN | 1.000000e+100 | 0.0019037 | TRUE | 0.0846715 | TRUE | MIR4454 | NR_039659 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.69 | FALSE |
| 453 | chr15 | 77906118 | 77906236 | 119 |
|
84.84278 | 10096.291 | 7908941 | 7909059 | 231 | 2856 | 0.6848739 | 0.0000000 | 0.0000000 | 0.0000000 | 2.7394958 | NaN | NaN | 1.000000e+100 | 0.0019040 | TRUE | 0.0846715 | TRUE | LINGO1 | NM_032808 NP_116197 XM_006720723 XP_006720786 | inside exon | inside | 82239 | inside exon | 0 | 4 | 4 | 3'UTR |
|
83106 | 1844 | 0.69 | FALSE |
| 454 | chr17 | 47129098 | 47129268 | 171 |
|
58.89830 | 10071.610 | 9733884 | 9734054 | 231 | 18864 | 0.7078947 | 0.0000000 | 0.0000000 | 0.0000000 | 2.8315789 | NaN | NaN | 1.000000e+100 | 0.0019206 | TRUE | 0.0852042 | TRUE | IGF2BP1 | NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012 | inside exon | inside | 54324 | inside exon | 0 | 13 | 13 | 3'UTR |
|
58733 | 51698 | 0.69 | FALSE |
| 455 | chr8 | 9760344 | 9760432 | 89 |
|
113.10754 | 10066.571 | 608741 | 608829 | 19 | 2431 | 0.4786517 | 0.0000000 | 0.0000000 | 0.0000000 | 1.9146067 | NaN | NaN | 1.000000e+100 | 0.0019244 | TRUE | 0.0852042 | TRUE | LINC00599 | NR_024281 | NA | NA | 0 | NA | NA | NA | 3 | NA |
|
0 | 0 | 0.69 | FALSE |
| 456 | chr22 | 45939281 | 45939406 | 126 |
|
79.75466 | 10049.087 | 5802369 | 5802494 | 151 | 2298 | 1.5829365 | 0.1603175 | 0.2206349 | 0.3126984 | 5.6380952 | 4.607296e-01 | 9.638403e-01 | 5.136204e+00 | 0.0019358 | TRUE | 0.0854917 | TRUE | FBLN1 | NM_001996 NM_006485 NM_006486 NM_006487 NP_001987 NP_006476 NP_006477 NP_006478 | inside exon | inside | 40562 | inside exon | 0 | 11 | 17 | inside transcription region |
|
98295 | 97460 | 0.69 | FALSE |
| 457 | chr9 | 76701613 | 76701778 | 166 |
|
60.45454 | 10035.453 | 4588730 | 4588895 | 157 | 6962 | 0.4927711 | 0.0000000 | 0.0000000 | 0.0000000 | 1.9710843 | NaN | NaN | 1.000000e+100 | 0.0019452 | TRUE | 0.0854917 | TRUE | RORB | NM_006914 NP_008845 | upstream | upstream | 410474 | NA | NA | NA | 10 | NA |
|
189865 | 187641 | 0.69 | FALSE |
| 458 | chr21 | 18941752 | 18941930 | 179 |
|
56.04554 | 10032.152 | 273492 | 273670 | 17 | 3751 | 0.8162011 | 0.2055866 | 0.0379888 | 0.2670391 | 2.7541899 | -2.436099e+00 | 3.773049e-01 | 3.743810e+00 | 0.0019483 | TRUE | 0.0854917 | TRUE | CXADR | NM_001207063 NM_001207064 NM_001207065 NM_001207066 NM_001338 NP_001193992 NP_001193993 NP_001193994 NP_001193995 NP_001329 | inside intron | inside | 56528 | inside intron | -3823 | 7 | 8 | inside transcription region |
|
80673 | 80063 | 0.69 | FALSE |
| 459 | chr20 | 38902161 | 38902383 | 223 |
|
44.97933 | 10030.391 | 4403469 | 4403691 | 116 | 5560 | 1.7230942 | 0.0394619 | 0.0394619 | 0.0161435 | 6.7973094 | 0.000000e+00 | -1.289507e+00 | 7.428360e+00 | 0.0019493 | TRUE | 0.0854917 | TRUE | MAFB | NM_005461 NP_005452 | downstream | downstream | 415493 | NA | NA | NA | 1 | NA |
|
3359 | 971 | 0.69 | FALSE |
| 460 | chr11 | 83108133 | 83108233 | 101 |
|
99.22782 | 10022.010 | 9794343 | 9794443 | 291 | 101 | 0.8143564 | 0.1069307 | 0.0396040 | 0.0000000 | 3.1108911 | -1.432959e+00 | -1.000000e+100 | 4.862580e+00 | 0.0019549 | TRUE | 0.0854917 | TRUE | DLG2 | NM_001142699 NM_001142700 NM_001142702 NM_001206769 NM_001364 NP_001136171 NP_001136172 NP_001136174 NP_001193698 NP_001355 XM_005273805 XM_005273806 XM_005273807 XM_005273809 XM_005273810 XM_005273811 XM_006718438 XM_006718439 XM_006718440 XP_005273862 XP_005273863 XP_005273864 XP_005273866 XP_005273867 XP_005273868 XP_006718501 XP_006718502 XP_006718503 | downstream | downstream | 285235 | NA | NA | NA | 11 | NA |
|
227412 | 173463 | 0.69 | FALSE |
| 461 | chr1 | 82456075 | 82456254 | 180 |
|
55.66019 | 10018.835 | 11404955 | 11405134 | 322 | 1848 | 0.8138889 | 0.0000000 | 0.0000000 | 0.0000000 | 3.2555556 | NaN | NaN | 1.000000e+100 | 0.0019564 | TRUE | 0.0854917 | TRUE | LPHN2 | NM_012302 NP_036434 XM_005270666 XM_005270667 XM_005270668 XM_005270670 XM_005270673 XM_005270674 XM_006710485 XM_006710486 XM_006710487 XM_006710488 XM_006710489 XM_006710490 XM_006710491 XM_006710492 XM_006710493 XM_006710494 XM_006710495 XM_006710496 XM_006710497 XP_005270723 XP_005270724 XP_005270725 XP_005270727 XP_005270730 XP_005270731 XP_006710548 XP_006710549 XP_006710550 XP_006710551 XP_006710552 XP_006710553 XP_006710554 XP_006710555 XP_006710556 XP_006710557 XP_006710558 XP_006710559 XP_006710560 | inside exon | inside | 40202 | inside exon | 0 | 17 | 17 | inside transcription region |
|
42234 | 40867 | 0.69 | FALSE |
| 462 | chr14 | 22005030 | 22005130 | 101 |
|
99.07812 | 10006.891 | 322723 | 322823 | 22 | 2586 | 0.5792079 | 0.0000000 | 0.0000000 | 0.0158416 | 2.3009901 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0019650 | TRUE | 0.0856447 | TRUE | SALL2 | NM_005407 NP_005398 XM_005267983 XP_005268040 | inside exon | inside | 207 | inside exon | 0 | 1 | 4 | overlaps 5' UTR |
|
15864 | 14913 | 0.70 | FALSE |
| 463 | chr16 | 65264400 | 65264601 | 202 |
|
49.51640 | 10002.313 | 8195168 | 8195369 | 214 | 5478 | 0.8430693 | 0.0089109 | 0.0217822 | 0.0257426 | 3.3158416 | 1.289507e+00 | 1.530515e+00 | 8.539590e+00 | 0.0019684 | TRUE | 0.0856447 | TRUE | LINC00922 | NM_001101346 NR_027755 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.70 | FALSE |
| 464 | chr9 | 124558856 | 124558991 | 136 |
|
73.41917 | 9985.007 | 9066783 | 9066918 | 316 | 483 | 0.8213235 | 0.0000000 | 0.1485294 | 0.0000000 | 3.1367647 | 1.000000e+100 | NaN | 1.000000e+100 | 0.0019786 | TRUE | 0.0859038 | TRUE | DAB2IP | NM_032552 NM_138709 NP_115941 NP_619723 XM_005251719 XM_005251720 XM_005251721 XM_005251722 XM_005251723 XM_005251724 XM_005251725 XM_006716961 XM_006716962 XP_005251776 XP_005251777 XP_005251778 XP_005251779 XP_005251780 XP_005251781 XP_005251782 XP_006717024 XP_006717025 | downstream | downstream | 229457 | NA | NA | NA | 17 | NA |
|
218410 | 216356 | 0.70 | FALSE |
| 465 | chr17 | 42882181 | 42882372 | 192 |
|
51.93732 | 9971.965 | 8249029 | 8249220 | 204 | 7091 | 0.6260417 | 0.2072917 | 0.0000000 | 0.0000000 | 2.2968750 | -1.000000e+100 | -1.000000e+100 | 3.469938e+00 | 0.0019877 | TRUE | 0.0861126 | TRUE | GJC1 | NM_001080383 NM_005497 NP_001073852 NP_005488 XM_005256920 XM_005256921 XP_005256977 XP_005256978 | inside exon | inside | 25807 | inside exon | 0 | 3 | 3 | inside transcription region |
|
32363 | 1190 | 0.70 | FALSE |
| 466 | chr7 | 156685703 | 156685770 | 68 |
|
146.35663 | 9952.251 | 16523526 | 16523593 | 453 | 77 | 12.2485294 | 39.2941176 | 6.2617647 | 2.7764706 | 0.6617647 | -2.649672e+00 | -3.822989e+00 | -5.891851e+00 | 0.0020008 | TRUE | 0.0864959 | TRUE | LMBR1 | NM_022458 NP_071903 XM_005249555 XM_005249556 XM_005249558 XM_005249559 XP_005249612 XP_005249613 XP_005249615 XP_005249616 XR_428184 XR_428185 | inside exon | inside | 132 | inside exon | 0 | 1 | 15 | 5' UTR |
|
212332 | 208925 | 0.70 | FALSE |
| 467 | chr1 | 62696349 | 62696450 | 102 |
|
97.38546 | 9933.317 | 10234282 | 10234383 | 268 | 5146 | 0.5524510 | 0.0000000 | 0.0000000 | 0.0000000 | 2.2098039 | NaN | NaN | 1.000000e+100 | 0.0020135 | TRUE | 0.0868565 | TRUE | KANK4 | NM_181712 NP_859063 | downstream | downstream | 32646 | NA | NA | NA | 4 | NA |
|
27259 | 14885 | 0.70 | FALSE |
| 468 | chr2 | 241653192 | 241653345 | 154 |
|
64.45807 | 9926.543 | 23640111 | 23640264 | 634 | 13166 | 0.8000000 | 0.0259740 | 0.0000000 | 0.0000000 | 3.1740260 | -1.000000e+100 | -1.000000e+100 | 6.933101e+00 | 0.0020179 | TRUE | 0.0868594 | TRUE | KIF1A | NM_001244008 NM_004321 NP_001230937 NP_004312 XM_005247022 XM_005247023 XM_005247024 XM_005247026 XM_005247027 XM_005247028 XM_006712601 XM_006712602 XM_006712603 XM_006712604 XM_006712605 XP_005247079 XP_005247080 XP_005247081 XP_005247083 XP_005247084 XP_005247085 XP_006712664 XP_006712665 XP_006712666 XP_006712667 XP_006712668 | inside exon | inside | 106380 | inside exon | 0 | 49 | 49 | 3'UTR |
|
106544 | 80388 | 0.70 | FALSE |
| 469 | chr11 | 3432862 | 3432998 | 137 |
|
72.27772 | 9902.048 | 720472 | 720608 | 13 | 10349 | 0.8985401 | 0.0000000 | 0.0000000 | 0.0000000 | 3.5941606 | NaN | NaN | 1.000000e+100 | 0.0020323 | TRUE | 0.0872943 | TRUE | LOC650368 | NR_024248 | NA | NA | 0 | NA | NA | NA | 9 | NA |
|
0 | 0 | 0.70 | FALSE |
| 470 | chr2 | 193000335 | 193000454 | 120 |
|
82.43569 | 9892.283 | 18581135 | 18581254 | 499 | 120 | 2.8979167 | 0.0000000 | 0.0000000 | 0.1683333 | 11.4233333 | NaN | 1.000000e+100 | 1.000000e+100 | 0.0020396 | TRUE | 0.0874215 | TRUE | TMEFF2 | NM_016192 NP_057276 XM_005246437 XP_005246494 | inside intron | inside | 59190 | inside intron | -43940 | 4 | 10 | inside transcription region |
|
244897 | 244213 | 0.70 | FALSE |
| 471 | chr1 | 6306352 | 6306458 | 107 |
|
92.29174 | 9875.216 | 924540 | 924646 | 30 | 1346 | 0.6000000 | 0.0000000 | 0.0000000 | 0.0000000 | 2.4000000 | NaN | NaN | 1.000000e+100 | 0.0020524 | TRUE | 0.0875924 | TRUE | HES3 | NM_001024598 NP_001019769 | close to 3' | close to 3' | 2100 | NA | NA | NA | 4 | NA |
|
1386 | 1141 | 0.71 | FALSE |
| 472 | chr1 | 158068293 | 158068491 | 199 |
|
49.61405 | 9873.196 | 20093347 | 20093545 | 545 | 6758 | 0.4572864 | 0.1989950 | 0.0000000 | 0.0000000 | 1.6301508 | -1.000000e+100 | -1.000000e+100 | 3.034201e+00 | 0.0020531 | TRUE | 0.0875924 | TRUE | KIRREL | NM_001286349 NM_018240 NP_001273278 NP_060710 XM_005245305 XM_005245306 XM_006711430 XP_005245362 XP_005245363 XP_006711493 | downstream | downstream | 105230 | NA | NA | NA | 15 | NA |
|
102781 | 101443 | 0.71 | FALSE |
| 473 | chr4 | 79462972 | 79463128 | 157 |
|
62.87832 | 9871.896 | 5857884 | 5858040 | 207 | 3243 | 0.6917197 | 0.0000000 | 0.1872611 | 0.2114650 | 2.3681529 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0020566 | TRUE | 0.0875924 | TRUE | FRAS1 | NM_001166133 NM_020875 NM_025074 NM_032863 NM_206841 NP_001159605 NP_079350 XM_006714314 XM_006714315 XM_006714316 XM_006714317 XP_006714377 XP_006714378 XP_006714379 XP_006714380 | inside exon | inside | 484248 | inside exon | 0 | 74 | 74 | 3'UTR |
|
486699 | 483114 | 0.71 | FALSE |
| 474 | chr6 | 131828039 | 131828174 | 136 |
|
72.26000 | 9827.359 | 12291424 | 12291559 | 343 | 136 | 2.2977941 | 0.0000000 | 0.2617647 | 0.5411765 | 8.3882353 | 1.000000e+100 | 1.000000e+100 | 1.000000e+100 | 0.0020878 | TRUE | 0.0884195 | TRUE | ARG1 | NM_000045 NM_001244438 NP_000036 NP_001231367 | upstream | upstream | 66170 | NA | NA | NA | 7 | NA |
|
11121 | 10524 | 0.71 | FALSE |
| 475 | chr20 | 38900421 | 38900550 | 130 |
|
75.49913 | 9814.887 | 4402171 | 4402300 | 116 | 5560 | 0.6069231 | 0.0000000 | 0.0000000 | 0.0000000 | 2.4276923 | NaN | NaN | 1.000000e+100 | 0.0020943 | TRUE | 0.0884195 | TRUE | MAFB | NM_005461 NP_005452 | downstream | downstream | 417326 | NA | NA | NA | 1 | NA |
|
3359 | 971 | 0.71 | FALSE |
| 476 | chr7 | 13933064 | 13933284 | 221 |
|
44.39781 | 9811.916 | 1615368 | 1615588 | 37 | 4281 | 0.8846154 | 0.4081448 | 0.1828054 | 0.0000000 | 2.9475113 | -1.158772e+00 | -1.000000e+100 | 2.852344e+00 | 0.0020957 | TRUE | 0.0884195 | TRUE | ETV1 | NM_001163147 NM_001163148 NM_001163149 NM_001163150 NM_001163151 NM_001163152 NM_004956 NP_001156619 NP_001156620 NP_001156621 NP_001156622 NP_001156623 NP_001156624 NP_004947 XM_005249635 XM_005249636 XP_005249692 XP_005249693 | inside exon | inside | 97766 | inside exon | 0 | 13 | 13 | 3'UTR |
|
100194 | 82539 | 0.71 | FALSE |
| 477 | chr4 | 93365600 | 93365700 | 101 |
|
97.13011 | 9810.141 | 7117134 | 7117234 | 250 | 6141 | 0.6188119 | 0.0000000 | 0.0000000 | 0.0000000 | 2.4752475 | NaN | NaN | 1.000000e+100 | 0.0020967 | TRUE | 0.0884195 | TRUE | GRID2 | NM_001286838 NM_001510 NP_001273767 NP_001501 XM_006714195 XP_006714258 | inside intron | inside | 140050 | inside intron | -139705 | 1 | 15 | inside transcription region |
|
1468099 | 1467841 | 0.71 | FALSE |
| 478 | chr1 | 13942400 | 13942520 | 121 |
|
81.04175 | 9806.051 | 2304219 | 2304339 | 59 | 3939 | 0.6838843 | 0.3867769 | 0.0000000 | 0.0000000 | 2.3487603 | -1.000000e+100 | -1.000000e+100 | 2.602326e+00 | 0.0020980 | TRUE | 0.0884195 | TRUE | PDPN | NM_001006624 NM_001006625 NM_006474 NM_198389 NP_001006625 NP_001006626 NP_006465 NP_938203 XM_006710295 XP_006710358 | inside exon | inside | 30433 | inside exon | 0 | 6 | 6 | overlaps 3'UTR |
|
32485 | 8679 | 0.71 | FALSE |
| 479 | chr5 | 141692045 | 141692145 | 101 |
|
97.02620 | 9799.646 | 12325387 | 12325487 | 384 | 14439 | 0.4400990 | 0.0000000 | 0.0000000 | 0.0000000 | 1.7603960 | NaN | NaN | 1.000000e+100 | 0.0021047 | TRUE | 0.0885146 | TRUE | SPRY4 | NM_001127496 NM_030964 NP_001120968 NP_112226 XM_005268518 XM_005268519 XM_006714798 XP_005268575 XP_005268576 XP_006714861 | inside exon | inside | 12475 | inside exon | 0 | 3 | 3 | 3'UTR |
|
14628 | 5556 | 0.71 | FALSE |
| 480 | chr16 | 51173356 | 51173479 | 124 |
|
78.78012 | 9768.734 | 7328509 | 7328632 | 178 | 4772 | 0.5338710 | 0.0000000 | 0.0000000 | 0.0000000 | 2.1354839 | NaN | NaN | 1.000000e+100 | 0.0021280 | TRUE | 0.0891384 | TRUE | SALL1 | NM_001127892 NM_002968 NP_001121364 NP_002959 XM_006721241 XP_006721304 | inside exon | inside | 11704 | inside exon | 0 | 2 | 3 | inside transcription region |
|
14160 | 4818 | 0.72 | FALSE |
| 481 | chr15 | 65622064 | 65622202 | 139 |
|
70.27527 | 9768.262 | 5965180 | 5965318 | 184 | 8664 | 0.9291367 | 0.0071942 | 0.0000000 | 0.0000000 | 3.7093525 | -1.000000e+100 | -1.000000e+100 | 9.010108e+00 | 0.0021283 | TRUE | 0.0891384 | TRUE | IGDCC3 | NM_004884 NP_004875 | inside exon | inside | 26508 | inside exon | 0 | 11 | 12 | inside transcription region |
|
26982 | 6564 | 0.72 | FALSE |
| 482 | chr7 | 83090034 | 83090139 | 106 |
|
91.81007 | 9731.868 | 8279583 | 8279688 | 218 | 5588 | 0.6688679 | 0.0000000 | 0.0000000 | 0.0000000 | 2.6754717 | NaN | NaN | 1.000000e+100 | 0.0021563 | TRUE | 0.0901196 | TRUE | SEMA3E | NM_001178129 NM_012431 NP_001171600 NP_036563 XM_006716187 XP_006716250 | inside intron | inside | 188340 | inside intron | -5659 | 4 | 17 | inside transcription region |
|
285257 | 280956 | 0.72 | FALSE |
| 483 | chr14 | 77598476 | 77598592 | 117 |
|
82.89532 | 9698.753 | 7117113 | 7117229 | 221 | 2474 | 0.6170940 | 0.0000000 | 0.0000000 | 0.0000000 | 2.4683761 | NaN | NaN | 1.000000e+100 | 0.0021827 | TRUE | 0.0909085 | TRUE | ZDHHC22 | NM_174976 NP_777636 XM_006720119 XM_006720120 XP_006720182 XP_006720183 | inside exon | inside | 9542 | inside exon | 0 | 3 | 3 | 3'UTR |
|
10521 | 6055 | 0.72 | FALSE |
| 484 | chrX | 113836089 | 113836246 | 158 |
|
61.37717 | 9697.593 | 6944417 | 6944574 | 300 | 5470 | 3.6591772 | 0.7670886 | 1.2784810 | 1.4063291 | 11.1848101 | 7.369656e-01 | 8.744691e-01 | 3.866004e+00 | 0.0021842 | TRUE | 0.0909085 | TRUE | HTR2C | NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690 | inside intron | inside | 17538 | inside intron | 12027 | 2 | 7 | 5' UTR |
|
326073 | 180632 | 0.72 | FALSE |
| 485 | chr15 | 65622631 | 65622735 | 105 |
|
92.03202 | 9663.362 | 5965319 | 5965423 | 184 | 8664 | 0.9038095 | 0.0000000 | 0.0000000 | 0.0000000 | 3.6152381 | NaN | NaN | 1.000000e+100 | 0.0022108 | TRUE | 0.0918261 | TRUE | IGDCC3 | NM_004884 NP_004875 | inside exon | inside | 25975 | inside exon | 0 | 10 | 12 | inside transcription region |
|
26982 | 6564 | 0.72 | FALSE |
| 486 | chr8 | 30242222 | 30242387 | 166 |
|
58.00262 | 9628.435 | 2684413 | 2684578 | 80 | 656 | 0.7948795 | 0.0939759 | 0.1180723 | 0.1361446 | 2.8313253 | 3.293076e-01 | 5.347767e-01 | 4.913043e+00 | 0.0022327 | TRUE | 0.0925449 | TRUE | RBPMS | NM_001008710 NM_001008711 NM_001008712 NM_006867 NP_001008710 NP_001008711 NP_001008712 NP_006858 XM_005273386 XM_005273390 XM_006716277 XM_006716278 XM_006716279 XP_005273443 XP_005273447 XP_006716340 XP_006716341 XP_006716342 XR_428303 XR_428304 XR_428305 | inside exon | inside | 278 | inside exon | 0 | 1 | 9 | 5' UTR |
|
187790 | 173857 | 0.72 | FALSE |
| 487 | chr4 | 93542615 | 93542715 | 101 |
|
95.16360 | 9611.524 | 7119186 | 7119286 | 253 | 1605 | 0.5212871 | 0.0000000 | 0.0000000 | 0.0000000 | 2.0851485 | NaN | NaN | 1.000000e+100 | 0.0022442 | TRUE | 0.0928313 | TRUE | GRID2 | NM_001286838 NM_001510 NP_001273767 NP_001501 XM_006714195 XP_006714258 | inside intron | inside | 317065 | inside intron | -31178 | 2 | 15 | inside transcription region |
|
1468099 | 1467841 | 0.72 | FALSE |
| 488 | chr13 | 56156848 | 56157013 | 166 |
|
57.85711 | 9604.280 | 3927430 | 3927595 | 121 | 13379 | 0.8132530 | 0.0000000 | 0.0000000 | 0.0000000 | 3.2530120 | NaN | NaN | 1.000000e+100 | 0.0022498 | TRUE | 0.0928754 | TRUE | MIR5007 | NR_049804 | NA | NA | 0 | NA | NA | NA | 1 | NA |
|
0 | 0 | 0.73 | FALSE |
| 489 | chr4 | 180090213 | 180090347 | 135 |
|
71.00091 | 9585.122 | 12309507 | 12309641 | 468 | 3689 | 1.2514815 | 0.1007407 | 0.1925926 | 0.0000000 | 4.7125926 | 9.349050e-01 | -1.000000e+100 | 5.547802e+00 | 0.0022646 | TRUE | 0.0931165 | TRUE | LINC01098 | NM_001085490 NR_028342 | NA | NA | 0 | NA | NA | NA | 6 | NA |
|
0 | 0 | 0.73 | FALSE |
| 490 | chr22 | 31531000 | 31531100 | 101 |
|
94.89712 | 9584.609 | 2713910 | 2714010 | 72 | 5042 | 0.5054455 | 0.0000000 | 0.0000000 | 0.0000000 | 2.0217822 | NaN | NaN | 1.000000e+100 | 0.0022649 | TRUE | 0.0931165 | TRUE | PLA2G3 | NM_015715 NP_056530 | inside exon | inside | 5369 | inside exon | 0 | 7 | 7 | 3'UTR |
|
5676 | 4631 | 0.73 | FALSE |
| 491 | chr1 | 16112792 | 16113003 | 212 |
|
45.14585 | 9570.920 | 2508882 | 2509093 | 69 | 1865 | 0.8985849 | 0.4745283 | 0.1943396 | 0.2113208 | 2.7141509 | -1.287914e+00 | -1.167060e+00 | 2.515935e+00 | 0.0022771 | TRUE | 0.0934261 | TRUE | FBLIM1 | NM_001024215 NM_001024216 NM_017556 NP_001019386 NP_001019387 NP_060026 XM_005245900 XM_005245901 XM_005245902 XM_005245903 XM_005245904 XM_005245908 XM_005245909 XM_005245910 XM_005245911 XM_006710704 XM_006710705 XP_005245957 XP_005245958 XP_005245959 XP_005245960 XP_005245961 XP_005245965 XP_005245966 XP_005245967 XP_005245968 XP_006710767 XP_006710768 | inside exon | inside | 21333 | inside exon | 0 | 5 | 5 | 3'UTR |
|
21625 | 19677 | 0.73 | FALSE |
| 492 | chrX | 136653429 | 136653529 | 101 |
|
94.48578 | 9543.064 | 8316826 | 8316926 | 368 | 1802 | 0.5049505 | 0.0000000 | 0.0000000 | 0.0000000 | 2.0198020 | NaN | NaN | 1.000000e+100 | 0.0022998 | TRUE | 0.0940143 | TRUE | ZIC3 | NM_003413 NP_003404 | inside exon | inside | 5083 | inside exon | 0 | 3 | 3 | 3'UTR |
|
5913 | 3378 | 0.73 | FALSE |
| 493 | chr16 | 51170377 | 51170627 | 251 |
|
37.97442 | 9531.580 | 7327453 | 7327703 | 178 | 4772 | 0.7262948 | 0.0000000 | 0.0000000 | 0.0000000 | 2.9051793 | NaN | NaN | 1.000000e+100 | 0.0023100 | TRUE | 0.0940143 | TRUE | SALL1 | NM_001127892 NM_002968 NP_001121364 NP_002959 XM_006721241 XP_006721304 | inside exon | inside | 14556 | inside exon | 0 | 3 | 3 | 3'UTR |
|
15297 | 13764 | 0.73 | FALSE |
| 494 | chr7 | 136912591 | 136912822 | 232 |
|
41.06983 | 9528.201 | 13939736 | 13939967 | 384 | 720 | 1.2452586 | 0.1379310 | 0.2137931 | 0.0000000 | 4.6293103 | 6.322682e-01 | -1.000000e+100 | 5.068778e+00 | 0.0023128 | TRUE | 0.0940143 | TRUE | PTN | NM_002825 NP_002816 XM_005250515 XM_005250516 XP_005250572 XP_005250573 | inside exon | inside | 115724 | inside exon | 0 | 5 | 5 | overlaps 3'UTR |
|
116454 | 26953 | 0.73 | FALSE |
| 495 | chr8 | 15517016 | 15517156 | 141 |
|
67.53429 | 9522.335 | 1075373 | 1075513 | 31 | 2790 | 1.1358156 | 0.7716312 | 0.0000000 | 0.0000000 | 3.7716312 | -1.000000e+100 | -1.000000e+100 | 2.289205e+00 | 0.0023162 | TRUE | 0.0940143 | TRUE | TUSC3 | NM_006765 NM_178234 NP_006756 NP_839952 XM_005273646 XM_005273647 XM_005273648 XP_005273703 XP_005273704 XP_005273705 | inside exon | inside | 119420 | inside exon | 0 | 4 | 10 | inside transcription region |
|
226562 | 223787 | 0.73 | FALSE |
| 496 | chrX | 121375487 | 121375583 | 97 |
|
98.15380 | 9520.918 | 7508209 | 7508305 | 321 | 3521 | 0.4778351 | 0.0000000 | 0.0000000 | 0.0000000 | 1.9113402 | NaN | NaN | 1.000000e+100 | 0.0023177 | TRUE | 0.0940143 | TRUE | GRIA3 | NM_000828 NM_001256743 NM_007325 NM_181894 NP_000819 NP_001243672 NP_015564 | upstream | upstream | 942513 | NA | NA | NA | 5 | NA |
|
20437 | 19882 | 0.73 | FALSE |
| 497 | chr2 | 67563150 | 67563343 | 194 |
|
49.06549 | 9518.706 | 7343573 | 7343766 | 170 | 8050 | 1.1793814 | 0.0546392 | 0.2061856 | 0.0000000 | 4.4567010 | 1.915936e+00 | -1.000000e+100 | 6.349897e+00 | 0.0023194 | TRUE | 0.0940143 | TRUE | ETAA1 | NM_019002 NP_061875 XM_005264374 XM_005264375 XM_005264376 XM_005264377 XM_005264378 XP_005264431 XP_005264432 XP_005264433 XP_005264434 XP_005264435 | upstream | upstream | 61099 | NA | NA | NA | 6 | NA |
|
13091 | 12589 | 0.73 | FALSE |
| 498 | chr11 | 3416872 | 3416972 | 101 |
|
93.69364 | 9463.058 | 718832 | 718932 | 12 | 7326 | 0.5247525 | 0.0000000 | 0.0000000 | 0.0000000 | 2.0990099 | NaN | NaN | 1.000000e+100 | 0.0023608 | TRUE | 0.0954988 | TRUE | LOC650368 | NR_024248 | NA | NA | 0 | NA | NA | NA | 11 | NA |
|
0 | 0 | 0.74 | FALSE |
| 499 | chr5 | 146798010 | 146798194 | 185 |
|
50.96232 | 9428.029 | 12809684 | 12809868 | 396 | 5986 | 1.2129730 | 0.3340541 | 0.2951351 | 0.0000000 | 4.2227027 | -1.787059e-01 | -1.000000e+100 | 3.660013e+00 | 0.0023882 | TRUE | 0.0964141 | TRUE | DPYSL3 | NM_001197294 NM_001387 NP_001184223 NP_001378 | inside exon | inside | 91425 | inside exon | 0 | 3 | 14 | inside transcription region |
|
119248 | 115823 | 0.74 | FALSE |
| 500 | chr7 | 83094486 | 83094655 | 170 |
|
55.38853 | 9416.051 | 8283041 | 8283210 | 218 | 5588 | 2.2797059 | 0.0000000 | 0.0000000 | 0.0000000 | 9.1188235 | NaN | NaN | 1.000000e+100 | 0.0023962 | TRUE | 0.0964694 | TRUE | SEMA3E | NM_001178129 NM_012431 NP_001171600 NP_036563 XM_006716187 XP_006716250 | inside intron | inside | 183824 | inside intron | -1143 | 4 | 17 | inside transcription region |
|
285257 | 280956 | 0.74 | FALSE |
The following plots were made using ggbio (Yin, Cook, and Lawrence, 2012) which in turn uses ggplot2 (Wickham, 2009). For more details check plotCluster() in derfinder (Collado-Torres, Frazee, Jaffe, and Leek, 2014).
Below are the best 20 region clusters ordered by cluster area (sum of the area of regions inside a cluster). The region with the highest area in the cluster is shown with a red bar.
Below is the information on how the samples were permutted.
## 0to186 186to294 294to322 322to400
## Min. :0.00 Min. :0.00 Min. :0.00 Min. :0.00
## 1st Qu.:1.00 1st Qu.:1.00 1st Qu.:1.00 1st Qu.:1.00
## Median :1.00 Median :1.00 Median :1.00 Median :1.00
## Mean :1.25 Mean :1.25 Mean :1.25 Mean :1.25
## 3rd Qu.:2.00 3rd Qu.:2.00 3rd Qu.:2.00 3rd Qu.:2.00
## Max. :4.00 Max. :4.00 Max. :4.00 Max. :4.00
This table shows the summary per group of how many samples were assigned to the group. It can be used for fast detection of anomalies. Also note that 0 permutations out of 100 total permutations resulted in the same grouping as in the original observed data.
Note that in derfinder the re-sampling of the samples is done without replacement. This is done to avoid singular model matrices. While the sample balance is the same across the permutations, what changes are the adjusted variables (including the column medians).
The following table shows how the group labels were permuted. This can be useful to detect whether a permutation in particular had too many samples of a group labeled as another group, meaning that the resulting permuted group label resulted in pretty much a name change.
| permutation | group | 0to186 | 186to294 | 294to322 | 322to400 |
|---|---|---|---|---|---|
| 1 | 0to186 | 2 | 0 | 2 | 1 |
| 1 | 186to294 | 1 | 1 | 1 | 2 |
| 1 | 294to322 | 1 | 2 | 2 | 0 |
| 1 | 322to400 | 2 | 1 | 1 | 1 |
| 2 | 0to186 | 0 | 1 | 2 | 2 |
| 2 | 186to294 | 2 | 1 | 1 | 1 |
| 2 | 294to322 | 0 | 0 | 4 | 1 |
| 2 | 322to400 | 0 | 3 | 1 | 1 |
| 3 | 0to186 | 1 | 1 | 1 | 2 |
| 3 | 186to294 | 0 | 3 | 1 | 1 |
| 3 | 294to322 | 3 | 0 | 2 | 0 |
| 3 | 322to400 | 1 | 1 | 1 | 2 |
| 4 | 0to186 | 2 | 1 | 1 | 1 |
| 4 | 186to294 | 0 | 0 | 2 | 3 |
| 4 | 294to322 | 0 | 2 | 0 | 3 |
| 4 | 322to400 | 3 | 1 | 1 | 0 |
| 5 | 0to186 | 1 | 0 | 2 | 2 |
| 5 | 186to294 | 1 | 1 | 2 | 1 |
| 5 | 294to322 | 2 | 2 | 0 | 1 |
| 5 | 322to400 | 1 | 1 | 3 | 0 |
| 6 | 0to186 | 3 | 1 | 1 | 0 |
| 6 | 186to294 | 1 | 2 | 2 | 0 |
| 6 | 294to322 | 2 | 1 | 1 | 1 |
| 6 | 322to400 | 0 | 1 | 2 | 2 |
| 7 | 0to186 | 3 | 0 | 1 | 1 |
| 7 | 186to294 | 2 | 0 | 1 | 2 |
| 7 | 294to322 | 0 | 1 | 3 | 1 |
| 7 | 322to400 | 2 | 0 | 0 | 3 |
| 8 | 0to186 | 1 | 1 | 1 | 2 |
| 8 | 186to294 | 1 | 1 | 2 | 1 |
| 8 | 294to322 | 1 | 1 | 2 | 1 |
| 8 | 322to400 | 2 | 0 | 1 | 2 |
| 9 | 0to186 | 3 | 1 | 0 | 1 |
| 9 | 186to294 | 0 | 1 | 2 | 2 |
| 9 | 294to322 | 1 | 3 | 0 | 1 |
| 9 | 322to400 | 0 | 2 | 1 | 2 |
| 10 | 0to186 | 0 | 1 | 2 | 2 |
| 10 | 186to294 | 2 | 1 | 1 | 1 |
| 10 | 294to322 | 1 | 0 | 3 | 1 |
| 10 | 322to400 | 2 | 1 | 1 | 1 |
| 11 | 0to186 | 2 | 2 | 0 | 1 |
| 11 | 186to294 | 4 | 1 | 0 | 0 |
| 11 | 294to322 | 1 | 1 | 2 | 1 |
| 11 | 322to400 | 2 | 2 | 1 | 0 |
| 12 | 0to186 | 1 | 0 | 2 | 2 |
| 12 | 186to294 | 1 | 0 | 2 | 2 |
| 12 | 294to322 | 0 | 2 | 1 | 2 |
| 12 | 322to400 | 2 | 1 | 0 | 2 |
| 13 | 0to186 | 0 | 2 | 1 | 2 |
| 13 | 186to294 | 1 | 1 | 0 | 3 |
| 13 | 294to322 | 2 | 1 | 1 | 1 |
| 13 | 322to400 | 1 | 2 | 1 | 1 |
| 14 | 0to186 | 2 | 0 | 3 | 0 |
| 14 | 186to294 | 2 | 1 | 0 | 2 |
| 14 | 294to322 | 1 | 1 | 1 | 2 |
| 14 | 322to400 | 1 | 2 | 0 | 2 |
| 15 | 0to186 | 0 | 2 | 1 | 2 |
| 15 | 186to294 | 1 | 2 | 1 | 1 |
| 15 | 294to322 | 2 | 1 | 1 | 1 |
| 15 | 322to400 | 0 | 2 | 2 | 1 |
| 16 | 0to186 | 0 | 2 | 1 | 2 |
| 16 | 186to294 | 0 | 2 | 2 | 1 |
| 16 | 294to322 | 2 | 1 | 1 | 1 |
| 16 | 322to400 | 0 | 2 | 1 | 2 |
| 17 | 0to186 | 3 | 1 | 0 | 1 |
| 17 | 186to294 | 1 | 2 | 1 | 1 |
| 17 | 294to322 | 2 | 1 | 0 | 2 |
| 17 | 322to400 | 1 | 3 | 1 | 0 |
| 18 | 0to186 | 1 | 0 | 2 | 2 |
| 18 | 186to294 | 1 | 3 | 0 | 1 |
| 18 | 294to322 | 1 | 0 | 2 | 2 |
| 18 | 322to400 | 2 | 0 | 2 | 1 |
| 19 | 0to186 | 2 | 0 | 1 | 2 |
| 19 | 186to294 | 1 | 1 | 1 | 2 |
| 19 | 294to322 | 2 | 1 | 1 | 1 |
| 19 | 322to400 | 2 | 1 | 0 | 2 |
| 20 | 0to186 | 1 | 2 | 2 | 0 |
| 20 | 186to294 | 1 | 2 | 1 | 1 |
| 20 | 294to322 | 0 | 1 | 1 | 3 |
| 20 | 322to400 | 2 | 0 | 2 | 1 |
| 21 | 0to186 | 2 | 2 | 1 | 0 |
| 21 | 186to294 | 1 | 2 | 0 | 2 |
| 21 | 294to322 | 2 | 1 | 2 | 0 |
| 21 | 322to400 | 1 | 0 | 2 | 2 |
| 22 | 0to186 | 0 | 0 | 2 | 3 |
| 22 | 186to294 | 1 | 1 | 2 | 1 |
| 22 | 294to322 | 1 | 1 | 2 | 1 |
| 22 | 322to400 | 1 | 2 | 1 | 1 |
| 23 | 0to186 | 1 | 1 | 1 | 2 |
| 23 | 186to294 | 1 | 1 | 2 | 1 |
| 23 | 294to322 | 0 | 2 | 3 | 0 |
| 23 | 322to400 | 1 | 1 | 1 | 2 |
| 24 | 0to186 | 1 | 0 | 0 | 4 |
| 24 | 186to294 | 2 | 0 | 1 | 2 |
| 24 | 294to322 | 2 | 0 | 1 | 2 |
| 24 | 322to400 | 1 | 2 | 1 | 1 |
| 25 | 0to186 | 1 | 2 | 1 | 1 |
| 25 | 186to294 | 0 | 1 | 3 | 1 |
| 25 | 294to322 | 2 | 1 | 2 | 0 |
| 25 | 322to400 | 0 | 0 | 2 | 3 |
| 26 | 0to186 | 1 | 0 | 1 | 3 |
| 26 | 186to294 | 2 | 0 | 2 | 1 |
| 26 | 294to322 | 1 | 1 | 1 | 2 |
| 26 | 322to400 | 1 | 1 | 1 | 2 |
| 27 | 0to186 | 1 | 2 | 1 | 1 |
| 27 | 186to294 | 0 | 1 | 2 | 2 |
| 27 | 294to322 | 2 | 2 | 0 | 1 |
| 27 | 322to400 | 2 | 1 | 0 | 2 |
| 28 | 0to186 | 0 | 2 | 1 | 2 |
| 28 | 186to294 | 2 | 0 | 1 | 2 |
| 28 | 294to322 | 2 | 1 | 2 | 0 |
| 28 | 322to400 | 2 | 0 | 3 | 0 |
| 29 | 0to186 | 3 | 0 | 1 | 1 |
| 29 | 186to294 | 1 | 4 | 0 | 0 |
| 29 | 294to322 | 3 | 2 | 0 | 0 |
| 29 | 322to400 | 1 | 0 | 3 | 1 |
| 30 | 0to186 | 1 | 2 | 0 | 2 |
| 30 | 186to294 | 1 | 1 | 1 | 2 |
| 30 | 294to322 | 3 | 1 | 1 | 0 |
| 30 | 322to400 | 1 | 1 | 1 | 2 |
| 31 | 0to186 | 2 | 2 | 1 | 0 |
| 31 | 186to294 | 2 | 1 | 1 | 1 |
| 31 | 294to322 | 0 | 2 | 2 | 1 |
| 31 | 322to400 | 3 | 0 | 2 | 0 |
| 32 | 0to186 | 0 | 2 | 2 | 1 |
| 32 | 186to294 | 0 | 1 | 2 | 2 |
| 32 | 294to322 | 1 | 3 | 1 | 0 |
| 32 | 322to400 | 1 | 2 | 0 | 2 |
| 33 | 0to186 | 0 | 1 | 1 | 3 |
| 33 | 186to294 | 1 | 2 | 0 | 2 |
| 33 | 294to322 | 1 | 1 | 2 | 1 |
| 33 | 322to400 | 0 | 2 | 2 | 1 |
| 34 | 0to186 | 1 | 2 | 1 | 1 |
| 34 | 186to294 | 1 | 2 | 0 | 2 |
| 34 | 294to322 | 2 | 1 | 2 | 0 |
| 34 | 322to400 | 2 | 0 | 2 | 1 |
| 35 | 0to186 | 0 | 1 | 3 | 1 |
| 35 | 186to294 | 1 | 1 | 2 | 1 |
| 35 | 294to322 | 1 | 1 | 0 | 3 |
| 35 | 322to400 | 1 | 1 | 1 | 2 |
| 36 | 0to186 | 1 | 0 | 2 | 2 |
| 36 | 186to294 | 0 | 2 | 1 | 2 |
| 36 | 294to322 | 2 | 1 | 1 | 1 |
| 36 | 322to400 | 0 | 1 | 2 | 2 |
| 37 | 0to186 | 0 | 3 | 2 | 0 |
| 37 | 186to294 | 0 | 3 | 0 | 2 |
| 37 | 294to322 | 2 | 1 | 1 | 1 |
| 37 | 322to400 | 1 | 1 | 2 | 1 |
| 38 | 0to186 | 1 | 2 | 0 | 2 |
| 38 | 186to294 | 0 | 2 | 3 | 0 |
| 38 | 294to322 | 1 | 2 | 1 | 1 |
| 38 | 322to400 | 0 | 0 | 2 | 3 |
| 39 | 0to186 | 0 | 1 | 2 | 2 |
| 39 | 186to294 | 1 | 1 | 3 | 0 |
| 39 | 294to322 | 1 | 1 | 2 | 1 |
| 39 | 322to400 | 1 | 1 | 3 | 0 |
| 40 | 0to186 | 3 | 1 | 1 | 0 |
| 40 | 186to294 | 0 | 1 | 3 | 1 |
| 40 | 294to322 | 0 | 2 | 0 | 3 |
| 40 | 322to400 | 2 | 1 | 1 | 1 |
| 41 | 0to186 | 1 | 1 | 2 | 1 |
| 41 | 186to294 | 1 | 1 | 1 | 2 |
| 41 | 294to322 | 1 | 2 | 1 | 1 |
| 41 | 322to400 | 1 | 1 | 2 | 1 |
| 42 | 0to186 | 0 | 1 | 3 | 1 |
| 42 | 186to294 | 1 | 1 | 1 | 2 |
| 42 | 294to322 | 2 | 3 | 0 | 0 |
| 42 | 322to400 | 1 | 1 | 2 | 1 |
| 43 | 0to186 | 1 | 2 | 1 | 1 |
| 43 | 186to294 | 0 | 1 | 3 | 1 |
| 43 | 294to322 | 2 | 2 | 1 | 0 |
| 43 | 322to400 | 1 | 2 | 2 | 0 |
| 44 | 0to186 | 0 | 4 | 1 | 0 |
| 44 | 186to294 | 2 | 0 | 2 | 1 |
| 44 | 294to322 | 1 | 2 | 1 | 1 |
| 44 | 322to400 | 2 | 2 | 0 | 1 |
| 45 | 0to186 | 2 | 1 | 0 | 2 |
| 45 | 186to294 | 1 | 2 | 2 | 0 |
| 45 | 294to322 | 1 | 2 | 1 | 1 |
| 45 | 322to400 | 0 | 2 | 1 | 2 |
| 46 | 0to186 | 2 | 1 | 2 | 0 |
| 46 | 186to294 | 0 | 2 | 2 | 1 |
| 46 | 294to322 | 0 | 1 | 2 | 2 |
| 46 | 322to400 | 1 | 2 | 2 | 0 |
| 47 | 0to186 | 0 | 2 | 1 | 2 |
| 47 | 186to294 | 1 | 2 | 1 | 1 |
| 47 | 294to322 | 1 | 2 | 1 | 1 |
| 47 | 322to400 | 1 | 2 | 1 | 1 |
| 48 | 0to186 | 3 | 1 | 0 | 1 |
| 48 | 186to294 | 0 | 3 | 1 | 1 |
| 48 | 294to322 | 2 | 1 | 0 | 2 |
| 48 | 322to400 | 1 | 2 | 1 | 1 |
| 49 | 0to186 | 1 | 1 | 2 | 1 |
| 49 | 186to294 | 1 | 2 | 1 | 1 |
| 49 | 294to322 | 1 | 2 | 0 | 2 |
| 49 | 322to400 | 2 | 0 | 1 | 2 |
| 50 | 0to186 | 1 | 2 | 2 | 0 |
| 50 | 186to294 | 2 | 1 | 1 | 1 |
| 50 | 294to322 | 1 | 2 | 0 | 2 |
| 50 | 322to400 | 1 | 3 | 1 | 0 |
| 51 | 0to186 | 1 | 4 | 0 | 0 |
| 51 | 186to294 | 2 | 1 | 2 | 0 |
| 51 | 294to322 | 1 | 1 | 1 | 2 |
| 51 | 322to400 | 1 | 2 | 1 | 1 |
| 52 | 0to186 | 3 | 1 | 1 | 0 |
| 52 | 186to294 | 0 | 1 | 2 | 2 |
| 52 | 294to322 | 2 | 1 | 0 | 2 |
| 52 | 322to400 | 2 | 0 | 2 | 1 |
| 53 | 0to186 | 2 | 0 | 2 | 1 |
| 53 | 186to294 | 2 | 0 | 1 | 2 |
| 53 | 294to322 | 0 | 2 | 1 | 2 |
| 53 | 322to400 | 0 | 3 | 0 | 2 |
| 54 | 0to186 | 0 | 1 | 1 | 3 |
| 54 | 186to294 | 3 | 1 | 1 | 0 |
| 54 | 294to322 | 1 | 0 | 3 | 1 |
| 54 | 322to400 | 1 | 1 | 1 | 2 |
| 55 | 0to186 | 2 | 0 | 2 | 1 |
| 55 | 186to294 | 2 | 1 | 1 | 1 |
| 55 | 294to322 | 0 | 0 | 2 | 3 |
| 55 | 322to400 | 2 | 1 | 0 | 2 |
| 56 | 0to186 | 0 | 0 | 2 | 3 |
| 56 | 186to294 | 0 | 1 | 1 | 3 |
| 56 | 294to322 | 2 | 0 | 2 | 1 |
| 56 | 322to400 | 0 | 4 | 0 | 1 |
| 57 | 0to186 | 0 | 2 | 1 | 2 |
| 57 | 186to294 | 1 | 2 | 1 | 1 |
| 57 | 294to322 | 2 | 0 | 0 | 3 |
| 57 | 322to400 | 0 | 1 | 4 | 0 |
| 58 | 0to186 | 2 | 1 | 2 | 0 |
| 58 | 186to294 | 1 | 2 | 1 | 1 |
| 58 | 294to322 | 2 | 2 | 0 | 1 |
| 58 | 322to400 | 0 | 2 | 1 | 2 |
| 59 | 0to186 | 0 | 1 | 1 | 3 |
| 59 | 186to294 | 1 | 2 | 2 | 0 |
| 59 | 294to322 | 2 | 1 | 1 | 1 |
| 59 | 322to400 | 2 | 1 | 2 | 0 |
| 60 | 0to186 | 2 | 2 | 0 | 1 |
| 60 | 186to294 | 0 | 3 | 0 | 2 |
| 60 | 294to322 | 2 | 0 | 2 | 1 |
| 60 | 322to400 | 0 | 2 | 2 | 1 |
| 61 | 0to186 | 2 | 0 | 1 | 2 |
| 61 | 186to294 | 0 | 1 | 3 | 1 |
| 61 | 294to322 | 1 | 2 | 1 | 1 |
| 61 | 322to400 | 2 | 1 | 1 | 1 |
| 62 | 0to186 | 3 | 1 | 1 | 0 |
| 62 | 186to294 | 3 | 1 | 1 | 0 |
| 62 | 294to322 | 2 | 1 | 1 | 1 |
| 62 | 322to400 | 2 | 1 | 2 | 0 |
| 63 | 0to186 | 1 | 0 | 3 | 1 |
| 63 | 186to294 | 2 | 2 | 1 | 0 |
| 63 | 294to322 | 1 | 0 | 2 | 2 |
| 63 | 322to400 | 1 | 2 | 1 | 1 |
| 64 | 0to186 | 1 | 3 | 0 | 1 |
| 64 | 186to294 | 1 | 1 | 2 | 1 |
| 64 | 294to322 | 1 | 2 | 1 | 1 |
| 64 | 322to400 | 1 | 1 | 2 | 1 |
| 65 | 0to186 | 1 | 2 | 1 | 1 |
| 65 | 186to294 | 0 | 2 | 0 | 3 |
| 65 | 294to322 | 2 | 0 | 3 | 0 |
| 65 | 322to400 | 0 | 1 | 1 | 3 |
| 66 | 0to186 | 2 | 1 | 1 | 1 |
| 66 | 186to294 | 2 | 1 | 1 | 1 |
| 66 | 294to322 | 1 | 1 | 2 | 1 |
| 66 | 322to400 | 2 | 2 | 0 | 1 |
| 67 | 0to186 | 1 | 2 | 1 | 1 |
| 67 | 186to294 | 2 | 1 | 1 | 1 |
| 67 | 294to322 | 0 | 0 | 2 | 3 |
| 67 | 322to400 | 3 | 0 | 2 | 0 |
| 68 | 0to186 | 2 | 1 | 1 | 1 |
| 68 | 186to294 | 2 | 0 | 1 | 2 |
| 68 | 294to322 | 1 | 2 | 1 | 1 |
| 68 | 322to400 | 1 | 2 | 0 | 2 |
| 69 | 0to186 | 1 | 1 | 1 | 2 |
| 69 | 186to294 | 1 | 3 | 0 | 1 |
| 69 | 294to322 | 1 | 1 | 2 | 1 |
| 69 | 322to400 | 1 | 1 | 2 | 1 |
| 70 | 0to186 | 0 | 1 | 2 | 2 |
| 70 | 186to294 | 2 | 0 | 1 | 2 |
| 70 | 294to322 | 2 | 1 | 2 | 0 |
| 70 | 322to400 | 2 | 0 | 1 | 2 |
| 71 | 0to186 | 1 | 1 | 1 | 2 |
| 71 | 186to294 | 2 | 0 | 2 | 1 |
| 71 | 294to322 | 1 | 1 | 0 | 3 |
| 71 | 322to400 | 2 | 2 | 0 | 1 |
| 72 | 0to186 | 2 | 2 | 1 | 0 |
| 72 | 186to294 | 2 | 1 | 1 | 1 |
| 72 | 294to322 | 2 | 0 | 1 | 2 |
| 72 | 322to400 | 2 | 0 | 1 | 2 |
| 73 | 0to186 | 1 | 1 | 3 | 0 |
| 73 | 186to294 | 3 | 0 | 1 | 1 |
| 73 | 294to322 | 2 | 1 | 1 | 1 |
| 73 | 322to400 | 2 | 1 | 0 | 2 |
| 74 | 0to186 | 1 | 3 | 1 | 0 |
| 74 | 186to294 | 2 | 1 | 2 | 0 |
| 74 | 294to322 | 0 | 1 | 3 | 1 |
| 74 | 322to400 | 1 | 2 | 2 | 0 |
| 75 | 0to186 | 1 | 1 | 0 | 3 |
| 75 | 186to294 | 1 | 2 | 1 | 1 |
| 75 | 294to322 | 2 | 1 | 1 | 1 |
| 75 | 322to400 | 2 | 1 | 2 | 0 |
| 76 | 0to186 | 1 | 1 | 2 | 1 |
| 76 | 186to294 | 0 | 3 | 0 | 2 |
| 76 | 294to322 | 2 | 1 | 1 | 1 |
| 76 | 322to400 | 1 | 1 | 2 | 1 |
| 77 | 0to186 | 1 | 1 | 1 | 2 |
| 77 | 186to294 | 3 | 2 | 0 | 0 |
| 77 | 294to322 | 1 | 2 | 1 | 1 |
| 77 | 322to400 | 1 | 1 | 2 | 1 |
| 78 | 0to186 | 2 | 2 | 1 | 0 |
| 78 | 186to294 | 1 | 2 | 2 | 0 |
| 78 | 294to322 | 0 | 2 | 0 | 3 |
| 78 | 322to400 | 2 | 1 | 1 | 1 |
| 79 | 0to186 | 0 | 3 | 2 | 0 |
| 79 | 186to294 | 1 | 0 | 2 | 2 |
| 79 | 294to322 | 1 | 1 | 2 | 1 |
| 79 | 322to400 | 0 | 3 | 0 | 2 |
| 80 | 0to186 | 1 | 3 | 1 | 0 |
| 80 | 186to294 | 1 | 2 | 1 | 1 |
| 80 | 294to322 | 0 | 2 | 2 | 1 |
| 80 | 322to400 | 1 | 2 | 1 | 1 |
| 81 | 0to186 | 0 | 2 | 1 | 2 |
| 81 | 186to294 | 2 | 1 | 1 | 1 |
| 81 | 294to322 | 1 | 2 | 0 | 2 |
| 81 | 322to400 | 2 | 0 | 1 | 2 |
| 82 | 0to186 | 2 | 1 | 1 | 1 |
| 82 | 186to294 | 2 | 2 | 1 | 0 |
| 82 | 294to322 | 2 | 1 | 1 | 1 |
| 82 | 322to400 | 2 | 2 | 1 | 0 |
| 83 | 0to186 | 2 | 2 | 1 | 0 |
| 83 | 186to294 | 2 | 0 | 2 | 1 |
| 83 | 294to322 | 1 | 1 | 1 | 2 |
| 83 | 322to400 | 3 | 1 | 1 | 0 |
| 84 | 0to186 | 1 | 1 | 3 | 0 |
| 84 | 186to294 | 3 | 0 | 1 | 1 |
| 84 | 294to322 | 0 | 0 | 2 | 3 |
| 84 | 322to400 | 1 | 2 | 0 | 2 |
| 85 | 0to186 | 3 | 1 | 0 | 1 |
| 85 | 186to294 | 2 | 0 | 2 | 1 |
| 85 | 294to322 | 1 | 4 | 0 | 0 |
| 85 | 322to400 | 2 | 1 | 1 | 1 |
| 86 | 0to186 | 0 | 3 | 2 | 0 |
| 86 | 186to294 | 1 | 1 | 1 | 2 |
| 86 | 294to322 | 1 | 1 | 1 | 2 |
| 86 | 322to400 | 1 | 1 | 1 | 2 |
| 87 | 0to186 | 1 | 1 | 0 | 3 |
| 87 | 186to294 | 1 | 1 | 2 | 1 |
| 87 | 294to322 | 1 | 1 | 2 | 1 |
| 87 | 322to400 | 0 | 2 | 1 | 2 |
| 88 | 0to186 | 3 | 1 | 1 | 0 |
| 88 | 186to294 | 2 | 0 | 1 | 2 |
| 88 | 294to322 | 1 | 2 | 1 | 1 |
| 88 | 322to400 | 3 | 1 | 1 | 0 |
| 89 | 0to186 | 2 | 1 | 0 | 2 |
| 89 | 186to294 | 1 | 2 | 0 | 2 |
| 89 | 294to322 | 2 | 1 | 1 | 1 |
| 89 | 322to400 | 2 | 1 | 0 | 2 |
| 90 | 0to186 | 1 | 0 | 2 | 2 |
| 90 | 186to294 | 4 | 0 | 1 | 0 |
| 90 | 294to322 | 1 | 2 | 1 | 1 |
| 90 | 322to400 | 3 | 1 | 1 | 0 |
| 91 | 0to186 | 2 | 1 | 1 | 1 |
| 91 | 186to294 | 2 | 1 | 1 | 1 |
| 91 | 294to322 | 1 | 1 | 1 | 2 |
| 91 | 322to400 | 2 | 0 | 2 | 1 |
| 92 | 0to186 | 1 | 1 | 1 | 2 |
| 92 | 186to294 | 1 | 1 | 2 | 1 |
| 92 | 294to322 | 1 | 1 | 3 | 0 |
| 92 | 322to400 | 0 | 1 | 0 | 4 |
| 93 | 0to186 | 1 | 2 | 1 | 1 |
| 93 | 186to294 | 2 | 1 | 1 | 1 |
| 93 | 294to322 | 1 | 1 | 1 | 2 |
| 93 | 322to400 | 1 | 1 | 1 | 2 |
| 94 | 0to186 | 2 | 0 | 2 | 1 |
| 94 | 186to294 | 1 | 1 | 2 | 1 |
| 94 | 294to322 | 1 | 1 | 1 | 2 |
| 94 | 322to400 | 0 | 1 | 3 | 1 |
| 95 | 0to186 | 2 | 1 | 1 | 1 |
| 95 | 186to294 | 1 | 1 | 1 | 2 |
| 95 | 294to322 | 2 | 1 | 1 | 1 |
| 95 | 322to400 | 1 | 3 | 1 | 0 |
| 96 | 0to186 | 0 | 1 | 1 | 3 |
| 96 | 186to294 | 2 | 1 | 1 | 1 |
| 96 | 294to322 | 2 | 2 | 1 | 0 |
| 96 | 322to400 | 1 | 1 | 1 | 2 |
| 97 | 0to186 | 3 | 1 | 1 | 0 |
| 97 | 186to294 | 1 | 1 | 1 | 2 |
| 97 | 294to322 | 1 | 2 | 1 | 1 |
| 97 | 322to400 | 1 | 1 | 2 | 1 |
| 98 | 0to186 | 0 | 2 | 1 | 2 |
| 98 | 186to294 | 1 | 1 | 1 | 2 |
| 98 | 294to322 | 1 | 1 | 1 | 2 |
| 98 | 322to400 | 1 | 1 | 3 | 0 |
| 99 | 0to186 | 2 | 1 | 2 | 0 |
| 99 | 186to294 | 0 | 2 | 1 | 2 |
| 99 | 294to322 | 2 | 2 | 1 | 0 |
| 99 | 322to400 | 1 | 1 | 1 | 2 |
| 100 | 0to186 | 2 | 0 | 2 | 1 |
| 100 | 186to294 | 2 | 1 | 0 | 2 |
| 100 | 294to322 | 0 | 1 | 2 | 2 |
| 100 | 322to400 | 2 | 1 | 0 | 2 |
The F-statistic cutoff used was 1e-05 and type of cutoff used was theoretical. Furthermore, the maximum region (data) gap was set to and the maximum cluster gap was set to 3000.
This analysis was on each chromosome was performed with the following call to analyzeChr() (shown for one chromosome only):
## analyzeChr(chr = opt$chr, coverageInfo = covData, models = models,
## cutoffFstat = 1e-05, nPermute = 100, seeds = seq_len(100) +
## 20131212, groupInfo = groupInfo, lowMemDir = file.path(tempdir(),
## opt$chr, "chunksDir"), colsubset = colsubset, maxClusterGap = 3000,
## mc.cores = opt$mcores)
The results were merged using the following call to mergeResults():
## mergeResults(prefix = "run3-v1.0.10", genomicState = GenomicState.Hsapiens.UCSC.hg19.knownGene[["fullGenome"]],
## optionsStats = optionsStats)
This report was generated in path /dcs01/lieber/ajaffe/Brain/derRuns/derSoftware/snyder/derAnalysis using the following call to derfinderReport():
## derfinderReport(prefix = "run3-v1.0.10", browse = FALSE, nBestClusters = 20,
## fullCov = fullCov, device = "CairoPNG")
Date the report was generated.
## [1] "2014-11-24 17:06:42 EST"
Wallclock time spent generating the report.
## Time difference of 13.856 mins
R session information.
## setting value
## version R version 3.1.1 Patched (2014-10-16 r66782)
## system x86_64, linux-gnu
## ui X11
## language (EN)
## collate en_US.UTF-8
## tz
## package * version date source
## acepack 1.3.3.3 2013-05-03 CRAN (R 3.1.1)
## AnnotationDbi * 1.28.1 2014-10-29 Bioconductor
## base64enc 0.1.2 2014-06-26 CRAN (R 3.1.0)
## BatchJobs 1.5 2014-10-30 CRAN (R 3.1.1)
## BBmisc 1.8 2014-10-30 CRAN (R 3.1.1)
## bibtex 0.3.6 2013-07-29 CRAN (R 3.1.1)
## Biobase * 2.26.0 2014-10-15 Bioconductor
## BiocGenerics * 0.12.1 2014-11-15 Bioconductor
## BiocParallel 1.0.0 2014-10-15 Bioconductor
## biomaRt 2.22.0 2014-10-15 Bioconductor
## Biostrings 2.34.0 2014-10-15 Bioconductor
## biovizBase * 1.14.0 2014-10-15 Bioconductor
## bitops 1.0.6 2013-08-17 CRAN (R 3.1.0)
## brew 1.0.6 2011-04-13 CRAN (R 3.1.0)
## BSgenome 1.34.0 2014-10-15 Bioconductor
## bumphunter 1.6.0 2014-10-15 Bioconductor
## Cairo 1.5.6 2014-06-26 CRAN (R 3.1.0)
## checkmate 1.5.0 2014-10-19 CRAN (R 3.1.1)
## cluster 1.15.3 2014-09-04 CRAN (R 3.1.1)
## codetools 0.2.9 2014-08-21 CRAN (R 3.1.1)
## colorspace 1.2.4 2013-09-30 CRAN (R 3.1.0)
## DBI 0.3.1 2014-09-24 CRAN (R 3.1.1)
## derfinder * 1.0.10 2014-11-23 Bioconductor
## derfinderHelper 1.0.4 2014-11-05 Github (lcolladotor/derfinderHelper@27bcfe6)
## derfinderPlot 1.0.3 2014-11-05 Github (lcolladotor/derfinderPlot@8d076e3)
## devtools 1.6.1 2014-10-07 CRAN (R 3.1.1)
## dichromat 2.0.0 2013-01-24 CRAN (R 3.1.0)
## digest 0.6.4 2013-12-03 CRAN (R 3.1.0)
## doRNG 1.6 2014-03-07 CRAN (R 3.1.0)
## evaluate 0.5.5 2014-04-29 CRAN (R 3.1.0)
## fail 1.2 2013-09-19 CRAN (R 3.1.0)
## foreach 1.4.2 2014-04-11 CRAN (R 3.1.0)
## foreign 0.8.61 2014-03-28 CRAN (R 3.1.1)
## formatR 1.0 2014-08-25 CRAN (R 3.1.1)
## Formula 1.1.2 2014-07-13 CRAN (R 3.1.1)
## GenomeInfoDb * 1.2.3 2014-11-15 Bioconductor
## GenomicAlignments 1.2.1 2014-11-05 Bioconductor
## GenomicFeatures * 1.18.2 2014-10-29 Bioconductor
## GenomicFiles 1.2.0 2014-10-15 Bioconductor
## GenomicRanges * 1.18.3 2014-11-20 Bioconductor
## GGally 0.4.8 2014-08-26 CRAN (R 3.1.1)
## ggbio 1.14.0 2014-11-04 Bioconductor
## ggplot2 * 1.0.0 2014-05-21 CRAN (R 3.1.0)
## graph 1.44.0 2014-10-15 Bioconductor
## gridExtra * 0.9.1 2012-08-09 CRAN (R 3.1.1)
## gtable 0.1.2 2012-12-05 CRAN (R 3.1.0)
## highr 0.4 2014-10-23 CRAN (R 3.1.1)
## Hmisc 3.14.6 2014-11-22 CRAN (R 3.1.1)
## htmltools 0.2.6 2014-09-08 CRAN (R 3.1.1)
## httr 0.5 2014-09-02 CRAN (R 3.1.1)
## IRanges * 2.0.0 2014-10-15 Bioconductor
## iterators 1.0.7 2014-04-11 CRAN (R 3.1.0)
## knitcitations 1.0.4 2014-11-05 Github (cboettig/knitcitations@508de74)
## knitr * 1.8 2014-11-11 CRAN (R 3.1.1)
## knitrBootstrap 1.0.0 2014-11-19 Github (jimhester/knitrBootstrap@76c41f0)
## labeling 0.3 2014-08-23 CRAN (R 3.1.1)
## lattice 0.20.29 2014-04-04 CRAN (R 3.1.1)
## latticeExtra 0.6.26 2013-08-15 CRAN (R 3.1.0)
## locfit 1.5.9.1 2013-04-20 CRAN (R 3.1.0)
## lubridate 1.3.3 2013-12-31 CRAN (R 3.1.1)
## markdown 0.7.4 2014-08-24 CRAN (R 3.1.1)
## MASS 7.3.35 2014-09-30 CRAN (R 3.1.1)
## Matrix 1.1.4 2014-06-15 CRAN (R 3.1.1)
## matrixStats 0.10.3 2014-10-15 CRAN (R 3.1.1)
## memoise 0.2.1 2014-04-22 CRAN (R 3.1.0)
## mgcv * 1.8.3 2014-08-29 CRAN (R 3.1.1)
## mime 0.2 2014-09-26 CRAN (R 3.1.1)
## munsell 0.4.2 2013-07-11 CRAN (R 3.1.0)
## nlme * 3.1.118 2014-10-07 CRAN (R 3.1.1)
## nnet 7.3.8 2014-03-28 CRAN (R 3.1.1)
## OrganismDbi 1.8.0 2014-10-15 Bioconductor
## pkgmaker 0.22 2014-05-14 CRAN (R 3.1.0)
## plyr 1.8.1 2014-02-26 CRAN (R 3.1.0)
## proto 0.3.10 2012-12-22 CRAN (R 3.1.0)
## qvalue 1.40.0 2014-10-15 Bioconductor
## RBGL 1.42.0 2014-10-15 Bioconductor
## RColorBrewer * 1.0.5 2011-06-17 CRAN (R 3.1.0)
## Rcpp 0.11.3 2014-09-29 CRAN (R 3.1.1)
## RCurl 1.95.4.3 2014-07-29 CRAN (R 3.1.1)
## RefManageR 0.8.40 2014-10-29 CRAN (R 3.1.1)
## regionReport * 1.0.4 2014-11-24 Github (lcolladotor/regionReport@ba61191)
## registry 0.2 2012-01-24 CRAN (R 3.1.0)
## reshape 0.8.5 2014-04-23 CRAN (R 3.1.0)
## reshape2 1.4 2014-04-23 CRAN (R 3.1.0)
## RJSONIO 1.3.0 2014-07-28 CRAN (R 3.1.1)
## rmarkdown 0.3.3 2014-09-17 CRAN (R 3.1.1)
## R.methodsS3 1.6.1 2014-01-05 CRAN (R 3.1.0)
## rngtools 1.2.4 2014-03-06 CRAN (R 3.1.0)
## rpart 4.1.8 2014-03-28 CRAN (R 3.1.1)
## Rsamtools 1.18.2 2014-11-12 Bioconductor
## RSQLite 1.0.0 2014-10-25 CRAN (R 3.1.1)
## rstudioapi 0.1 2014-03-27 CRAN (R 3.1.1)
## rtracklayer 1.26.2 2014-11-12 Bioconductor
## S4Vectors * 0.4.0 2014-10-15 Bioconductor
## scales 0.2.4 2014-04-22 CRAN (R 3.1.0)
## sendmailR 1.2.1 2014-09-21 CRAN (R 3.1.1)
## stringr 0.6.2 2012-12-06 CRAN (R 3.1.0)
## survival 2.37.7 2014-01-22 CRAN (R 3.1.1)
## TxDb.Hsapiens.UCSC.hg19.knownGene * 3.0.0 2014-09-29 Bioconductor
## VariantAnnotation 1.12.4 2014-11-16 Bioconductor
## XML 3.98.1.1 2013-06-20 CRAN (R 3.1.0)
## xtable 1.7.4 2014-09-12 CRAN (R 3.1.1)
## XVector * 0.6.0 2014-10-15 Bioconductor
## yaml 2.1.13 2014-06-12 CRAN (R 3.1.1)
## zlibbioc 1.12.0 2014-10-15 Bioconductor
This report was created with regionReport (Collado-Torres, Jaffe, and Leek, 2014) using knitrBootstrap (Hester, 2014) to format the html while knitr (Xie, 2014) and rmarkdown (Allaire, McPherson, Xie, Wickham, et al., 2014) were running behind the scenes.
Citations made with knitcitations (Boettiger, 2014).
[1] J. Allaire, J. McPherson, Y. Xie, H. Wickham, et al. rmarkdown: Dynamic Documents for R. R package version 0.3.3. 2014. URL: http://CRAN.R-project.org/package=rmarkdown.
[2] C. Boettiger. knitcitations: Citations for knitr markdown files. R package version 1.0.4. 2014. URL: https://github.com/cboettig/knitcitations.
[3] L. Collado-Torres, A. C. Frazee, A. E. Jaffe and J. T. Leek. derfinder: Annotation-agnostic differential expression analysis of RNA-seq data at base-pair resolution. https://github.com/lcolladotor/derfinder - R package version 1.0.10. 2014. URL: http://www.bioconductor.org/packages/release/bioc/html/derfinder.html.
[4] L. Collado-Torres, A. E. Jaffe and J. T. Leek. regionReport: Generate HTML reports for exploring a set of regions. https://github.com/lcolladotor/regionReport - R package version 1.0.4. 2014. URL: http://www.bioconductor.org/packages/release/bioc/html/regionReport.html.
[5] J. Hester. knitrBootstrap: Knitr Bootstrap framework. R package version 1.0.0. 2014. URL: https://github.com/jimhester/.
[6] H. Wickham. ggplot2: elegant graphics for data analysis. Springer New York, 2009. ISBN: 978-0-387-98140-6. URL: http://had.co.nz/ggplot2/book.
[7] Y. Xie. “knitr: A Comprehensive Tool for Reproducible Research in R”. In: Implementing Reproducible Computational Research. Ed. by V. Stodden, F. Leisch and R. D. Peng. ISBN 978-1466561595. Chapman and Hall/CRC, 2014. URL: http://www.crcpress.com/product/isbn/9781466561595.
[8] T. Yin, D. Cook and M. Lawrence. “ggbio: an R package for extending the grammar of graphics for genomic data”. In: Genome Biology 13.8 (2012), p. R77.